C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A330048O09 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000097326 A330048O09Rik 10090 - 13:48272416-48273884 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000180777 A330048O09Rik-201 48272416-48273884 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyOvaryPlacentaTestisENSMUST00000180777
Transcript ID Adipose Bladder Brain Colon Kidney Ovary Placenta Testis
ENSMUST00000180777 0.174±0.16 2.299±0.17 0.797±0.30 0.228±0.00 0.077±0.00 0.256±0.14 0.105±0.04 0.059±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JM CIL_0007JM_0002 UCNEbase 13:47310756-48444349
CIL_0008T8 CIL_0008T8_0002 VISTA 13:47712107-48314217
CIL_000910 CIL_000910_0002 VISTA 13:47858420-48462088
CIL_0009DD CIL_0009DD_0002 VISTA 13:48083545-48684932
CIL_0008XX CIL_0008XX_0002 VISTA 13:48265958-48867063

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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