C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: miRNA containing gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000097391 Mirg 10090 + 12:109729764-109749460 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000181496 Mirg-002 109737780-109741503 lincRNA
  ENSMUST00000181543 Mirg-001 109734981-109749458 lincRNA
  ENSMUST00000182074 Mirg-012 109729765-109730841 lincRNA
  ENSMUST00000182185 Mirg-010 109730276-109749458 lincRNA
  ENSMUST00000182231 Mirg-006 109737702-109740061 lincRNA
  ENSMUST00000182268 Mirg-004 109734981-109743733 lincRNA
  ENSMUST00000182300 Mirg-008 109747964-109749458 lincRNA
  ENSMUST00000182499 Mirg-009 109730959-109749460 lincRNA
  ENSMUST00000183068 Mirg-007 109743801-109749458 lincRNA
  ENSMUST00000183084 Mirg-003 109747903-109749455 lincRNA
  ENSMUST00000183116 Mirg-005 109734985-109748183 lincRNA
  ENSMUST00000183144 Mirg-011 109729764-109749458 lincRNA

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000181496ENSMUST00000181543ENSMUST00000182185ENSMUST00000182231ENSMUST00000182300ENSMUST00000182499ENSMUST00000183068ENSMUST00000183084ENSMUST00000183116ENSMUST00000183144
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000181496 0.652±0.00 N/A 0.683±0.12 4.605±0.76 0.697±0.00 N/A 0.123±0.01 N/A 3.188±2.65 0.220±0.00 0.073±0.03 0.167±0.03 5.939±4.36 N/A
ENSMUST00000181543 1.982±0.48 4.212±1.40 2.233±1.36 10.627±2.74 2.165±1.13 4.187±0.91 0.355±0.23 0.128±0.07 17.090±17.81 0.640±0.15 0.125±0.04 2.624±1.44 19.551±8.37 4.818±2.75
ENSMUST00000182185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A
ENSMUST00000182231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.498±0.00 N/A N/A
ENSMUST00000182300 4.999±0.72 11.330±1.54 4.862±1.65 27.934±4.10 3.675±1.05 7.575±0.89 0.945±0.21 0.297±0.12 19.915±20.51 1.296±0.36 0.418±0.11 5.139±3.48 24.111±10.92 13.140±6.83
ENSMUST00000182499 N/A 1.196±0.00 N/A N/A 0.230±0.00 N/A 0.058±0.01 0.014±0.00 0.029±0.01 N/A 0.029±0.00 0.639±0.05 1.424±0.30 N/A
ENSMUST00000183068 N/A 5.372±0.72 N/A N/A N/A 4.226±0.00 N/A 0.169±0.07 0.083±0.04 N/A 0.234±0.02 1.455±0.00 N/A N/A
ENSMUST00000183084 N/A N/A 0.825±0.24 4.286±0.00 N/A N/A N/A 0.055±0.01 0.047±0.02 0.194±0.00 N/A 0.156±0.06 N/A N/A
ENSMUST00000183116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.09 N/A N/A 0.898±0.00
ENSMUST00000183144 N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Q7 CIL_0007Q7_0002 VISTA 12:109207924-109810969
CIL_0004AB CIL_0004AB_0002 CGP 12:109589194-110281097

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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