C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2810429I04 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000097709 2810429I04Rik 10090 + 13:3478230-3501393 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000180567 2810429I04Rik-010 3478303-3492406 lincRNA
  ENSMUST00000180836 2810429I04Rik-005 3478255-3488561 lincRNA
  ENSMUST00000181708 2810429I04Rik-004 3478243-3488058 lincRNA
  ENSMUST00000185835 2810429I04Rik-009 3478277-3485749 lincRNA
  ENSMUST00000186183 2810429I04Rik-003 3478230-3486177 lincRNA
  ENSMUST00000186610 2810429I04Rik-011 3478304-3489263 lincRNA
  ENSMUST00000186642 2810429I04Rik-008 3478262-3485398 lincRNA
  ENSMUST00000187921 2810429I04Rik-006 3478234-3485187 lincRNA
  ENSMUST00000188642 2810429I04Rik-002 3498045-3501393 lincRNA
  ENSMUST00000189464 2810429I04Rik-001 3478243-3498570 lincRNA
  ENSMUST00000190547 2810429I04Rik-012 3478326-3498110 lincRNA
  ENSMUST00000191585 2810429I04Rik-007 3478246-3489283 lincRNA

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000180567ENSMUST00000180836ENSMUST00000181708ENSMUST00000185835ENSMUST00000186183ENSMUST00000186610ENSMUST00000186642ENSMUST00000187921ENSMUST00000188642ENSMUST00000189464ENSMUST00000190547ENSMUST00000191585
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000180567 N/A N/A 0.102±0.00 N/A N/A 0.211±0.00 N/A 0.089±0.02 N/A 0.158±0.00 N/A N/A N/A N/A
ENSMUST00000180836 0.245±0.22 N/A 0.014±0.00 0.044±0.00 0.020±0.00 N/A 0.020±0.00 0.035±0.02 0.055±0.02 0.049±0.01 0.009±0.00 0.262±0.13 0.055±0.04 N/A
ENSMUST00000181708 N/A N/A 0.015±0.00 N/A 0.023±0.00 N/A 0.013±0.00 0.029±0.00 0.031±0.00 0.032±0.00 N/A N/A 0.095±0.01 0.059±0.00
ENSMUST00000185835 N/A N/A 0.007±0.00 N/A N/A N/A N/A N/A 0.183±0.04 0.111±0.00 0.053±0.00 N/A 0.320±0.00 N/A
ENSMUST00000186183 N/A N/A N/A 0.109±0.00 N/A 0.075±0.03 N/A 0.017±0.00 0.024±0.01 0.028±0.00 N/A 0.284±0.14 0.114±0.08 N/A
ENSMUST00000186610 N/A N/A N/A N/A N/A 0.181±0.00 N/A 0.081±0.00 N/A 0.095±0.00 N/A 1.070±0.00 1.128±0.00 N/A
ENSMUST00000186642 N/A 0.038±0.02 N/A N/A 0.060±0.02 0.081±0.05 0.023±0.00 0.064±0.00 N/A 0.014±0.00 N/A 0.472±0.18 N/A N/A
ENSMUST00000187921 N/A N/A 0.062±0.00 N/A 0.169±0.00 0.519±0.00 0.090±0.00 0.309±0.06 N/A 0.149±0.00 N/A 1.856±0.00 0.146±0.00 N/A
ENSMUST00000188642 N/A N/A 0.073±0.00 N/A 0.064±0.00 0.158±0.00 0.120±0.00 0.094±0.04 N/A N/A N/A N/A N/A 2.219±0.84
ENSMUST00000189464 N/A N/A N/A 1.408±0.65 0.235±0.00 0.141±0.03 N/A 0.052±0.00 0.063±0.00 0.055±0.00 0.091±0.00 1.000±0.32 N/A N/A
ENSMUST00000190547 N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A 1.403±0.00 1.588±0.03 N/A
ENSMUST00000191585 1.255±0.00 N/A N/A N/A 0.513±0.30 N/A 0.104±0.03 0.234±0.08 N/A 0.113±0.00 N/A 1.196±0.33 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HB CIL_0008HB_0002 VISTA 13:3426204-4027216
CIL_00097T CIL_00097T_0002 VISTA 13:3441069-4044545

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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