C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2810039B14 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000099034 2810039B14Rik 10090 + 15:75642129-75653643 pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000183928 2810039B14Rik-001 75642129-75647437 processed_transcript
  ENSMUST00000184602 2810039B14Rik-003 75642475-75644479 processed_transcript
  ENSMUST00000184665 2810039B14Rik-004 75644663-75646485 processed_transcript
  ENSMUST00000184801 2810039B14Rik-002 75642484-75653643 processed_transcript
  ENSMUST00000184938 2810039B14Rik-005 75644499-75646732 retained_intron
  ENSMUST00000185040 2810039B14Rik-006 75643486-75646967 unitary_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000183928ENSMUST00000184665ENSMUST00000184801ENSMUST00000184938ENSMUST00000185040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000183928 1.485±0.54 1.841±0.50 2.831±0.00 3.262±0.34 1.395±0.52 0.942±0.18 0.669±0.10 0.955±0.20 0.689±0.21 0.915±0.21 0.462±0.05 6.589±2.18 0.579±0.09 1.418±0.45
ENSMUST00000184665 N/A 4.849±1.12 N/A N/A N/A N/A N/A 1.247±0.11 0.881±0.00 N/A N/A N/A 0.256±0.00 1.072±0.00
ENSMUST00000184801 N/A N/A 0.894±0.00 0.460±0.23 0.390±0.10 0.336±0.17 0.131±0.02 0.654±0.14 0.357±0.12 0.289±0.03 0.260±0.07 1.738±0.11 0.347±0.22 0.196±0.00
ENSMUST00000184938 N/A 0.632±0.14 N/A N/A 0.331±0.00 0.171±0.00 N/A 0.484±0.03 0.164±0.01 N/A N/A 1.412±0.00 N/A N/A
ENSMUST00000185040 N/A 1.440±0.18 N/A N/A N/A 0.641±0.16 N/A 0.562±0.00 0.286±0.00 N/A N/A 3.493±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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