C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oppositely-transcribed, rearranged locus on the Y
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000099550 Orly 10090 - Y:70004208-70014899 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000185688 Orly-002 70004208-70014843 processed_transcript
  ENSMUST00000186006 Orly-007 70011161-70014743 processed_transcript
  ENSMUST00000186184 Orly-005 70010563-70014786 processed_transcript
  ENSMUST00000186763 Orly-009 70010535-70014755 processed_transcript
  ENSMUST00000187271 Orly-010 70010563-70012798 nonsense_mediated_decay
  ENSMUST00000188554 Orly-001 70012553-70014865 protein_coding
  ENSMUST00000188634 Orly-006 70010535-70014755 processed_transcript
  ENSMUST00000189328 Orly-008 70010537-70014761 processed_transcript
  ENSMUST00000190418 Orly-004 70010563-70014787 nonsense_mediated_decay
  ENSMUST00000191151 Orly-003 70013072-70014899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000188554
Transcript ID Testis
ENSMUST00000188554 0.266±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035697 protein_coding Danio_rerio
ENSDARG00000058949 SPIN1 protein_coding Danio_rerio

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