C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence AV026068
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000100510 RP24-459A4.1 10090 - 8:57304265-57320859 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000185635 RP24-459A4.1-003 57314288-57320748 retained_intron
  ENSMUST00000185793 RP24-459A4.1-002 57304265-57320404 retained_intron
  ENSMUST00000185946 RP24-459A4.1-006 57304265-57320325 lincRNA
  ENSMUST00000186214 RP24-459A4.1-008 57304271-57305358 lincRNA
  ENSMUST00000186386 RP24-459A4.1-001 57304265-57320859 lincRNA
  ENSMUST00000187461 RP24-459A4.1-005 57306947-57320767 retained_intron
  ENSMUST00000189143 RP24-459A4.1-004 57305243-57320830 retained_intron
  ENSMUST00000189169 RP24-459A4.1-007 57304265-57320735 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000185635ENSMUST00000185793ENSMUST00000185946ENSMUST00000186214ENSMUST00000186386ENSMUST00000187461ENSMUST00000189143ENSMUST00000189169
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000185635 N/A 0.450±0.00 0.022±0.00 N/A 0.473±0.14 4.777±0.83 0.140±0.00 0.440±0.00 0.345±0.00 0.097±0.00 0.523±0.30 N/A N/A
ENSMUST00000185793 N/A N/A N/A N/A 0.422±0.00 N/A N/A 0.675±0.13 N/A N/A 0.620±0.00 N/A N/A
ENSMUST00000185946 3.629±0.67 0.780±0.00 N/A N/A 0.613±0.51 8.174±1.62 0.124±0.00 0.918±0.41 0.226±0.07 0.160±0.00 0.906±0.00 1.312±0.00 0.139±0.00
ENSMUST00000186214 N/A N/A 0.040±0.00 N/A N/A N/A 0.104±0.00 0.265±0.00 N/A 0.048±0.00 0.526±0.00 N/A 0.234±0.03
ENSMUST00000186386 N/A 0.739±0.00 N/A N/A 0.517±0.00 3.312±0.37 N/A 0.318±0.09 0.179±0.00 N/A 0.186±0.00 0.712±0.00 N/A
ENSMUST00000187461 4.283±2.96 1.857±0.61 0.097±0.07 0.366±0.11 1.170±0.28 6.884±1.26 0.173±0.09 0.726±0.32 0.403±0.09 0.106±0.00 0.981±0.64 5.160±0.00 0.151±0.05
ENSMUST00000189143 2.439±2.32 3.654±1.08 N/A N/A 1.571±0.90 10.087±0.63 N/A 0.345±0.00 0.652±0.00 N/A 0.975±0.52 N/A N/A
ENSMUST00000189169 3.947±0.59 0.801±0.06 N/A N/A 0.523±0.28 3.637±0.69 0.120±0.07 0.404±0.17 N/A N/A 0.395±0.22 2.184±1.23 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080O CIL_00080O_0002 VISTA 8:56891052-57495815
CIL_0008BZ CIL_0008BZ_0002 VISTA 8:57035224-57635792
CIL_0008VG CIL_0008VG_0002 VISTA 8:57047180-57651136

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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