C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00000S_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000048392-ENSG00000104517 | CGP | 9606 | 8:102204502-102412841  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000048392  (RRM2B)ribonucleotide reductase M2 B (TP53 inducible) |
ENST00000251810 (RRM2B-001)
|
102204502-102239118 | protein_coding | |
|
ENST00000395910 (RRM2B-009)
|
102207776-102214229 | retained_intron | ||
|
ENST00000395912 (RRM2B-005)
|
102208133-102238874 | protein_coding | ||
|
ENST00000517517 (RRM2B-006)
|
102225975-102238797 | retained_intron | ||
|
ENST00000519125 (RRM2B-008)
|
102212776-102219015 | retained_intron | ||
|
ENST00000519317 (RRM2B-004)
|
102208133-102238874 | protein_coding | ||
|
ENST00000519962 (RRM2B-002)
|
102208133-102238874 | protein_coding | ||
|
ENST00000522368 (RRM2B-003)
|
102207745-102238775 | protein_coding | ||
|
ENST00000522394 (RRM2B-011)
|
102208133-102238874 | nonsense_mediated_decay | ||
|
ENST00000523957 (RRM2B-007)
|
102224923-102238939 | nonsense_mediated_decay | ||
|
ENST00000621845 (RRM2B-201)
|
102205625-102238775 | protein_coding | ||
|
ENSG00000104517 (UBR5) ubiquitin protein ligase E3 component n-recognin 5 |
ENST00000220959 (UBR5-002)
|
102253736-102412689 | protein_coding | |
|
ENST00000517465 (UBR5-012)
|
102253946-102261986 | retained_intron | ||
|
ENST00000518145 (UBR5-007)
|
102345896-102347000 | retained_intron | ||
|
ENST00000518205 (UBR5-004)
|
102254198-102272931 | protein_coding | ||
|
ENST00000519365 (UBR5-008)
|
102298867-102305257 | protein_coding | ||
|
ENST00000519528 (UBR5-014)
|
102287505-102293709 | processed_transcript | ||
|
ENST00000520539 (UBR5-001)
|
102253012-102412841 | protein_coding | ||
|
ENST00000520898 (UBR5-009)
|
102298860-102305182 | protein_coding | ||
|
ENST00000521312 (UBR5-011)
|
102265208-102267435 | retained_intron | ||
|
ENST00000521566 (UBR5-013)
|
102271194-102276820 | protein_coding | ||
|
ENST00000521767 (UBR5-010)
|
102265203-102268718 | retained_intron | ||
|
ENST00000521922 (UBR5-003)
|
102254198-102412759 | protein_coding | ||
|
ENST00000522327 (UBR5-006)
|
102359652-102361209 | retained_intron | ||
|
ENSG00000253328 (SUMO2P19) SUMO2 pseudogene 19 |
ENST00000518920 (SUMO2P19-001)
|
102242040-102242619 | unprocessed_pseudogene | |
| CIL_00000S_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000022292-ENSMUSG00000037487 | CGP | 10090 | 15:37923952-38078853 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000022292 (Rrm2b) ribonucleotide reductase M2 B (TP53 inducible) |
ENSMUST00000022901 (Rrm2b-001)
|
37923952-37961103 | protein_coding | |
|
ENSMUST00000127362 (Rrm2b-002)
|
37945048-37955138 | retained_intron | ||
|
ENSMUST00000137636 (Rrm2b-003)
|
37927245-37960891 | protein_coding | ||
|
ENSMUST00000144498 (Rrm2b-008)
|
37931637-37960929 | nonsense_mediated_decay | ||
|
ENSMUST00000145155 (Rrm2b-006)
|
37946752-37961318 | protein_coding | ||
|
ENSMUST00000145175 (Rrm2b-007)
|
37945153-37960849 | protein_coding | ||
|
ENSMUST00000146821 (Rrm2b-004)
|
37927245-37960891 | protein_coding | ||
|
ENSMUST00000153481 (Rrm2b-005)
|
37927245-37960891 | nonsense_mediated_decay | ||
|
ENSMUSG00000037487 (Ubr5) ubiquitin protein ligase E3 component n-recognin 5 |
ENSMUST00000110336 (Ubr5-201)
|
37967328-38078853 | protein_coding | |
|
ENSMUSG00000065852 (Gm22353) predicted gene, 22353 |
ENSMUST00000083918 (Gm22353-201)
|
38058285-38058420 | snoRNA | |
|
ENSMUSG00000085442 (Gm3362) predicted pseudogene 3362 |
ENSMUST00000148102 (Gm3362-001)
|
37943327-37943792 | processed_pseudogene | |
Expression Patterns
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