C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000010_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188706-ENSG00000156697 CGP 9606 X:129803288-129929761
GeneTranscriptPositionBiotype
ENSG00000156697 (UTP14A)
UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 		ENST00000394422 (UTP14A-002) 129906183-129929752 protein_coding
ENST00000425117 (UTP14A-201) 129906121-129929761 protein_coding
ENST00000427972 (UTP14A-001) 129913344-129924910 protein_coding
ENST00000498179 (UTP14A-003) 129920713-129923063 processed_transcript
ENSG00000188706 (ZDHHC9)
zinc finger, DHHC-type containing 9 		ENST00000357166 (ZDHHC9-001) 129803288-129843884 protein_coding
ENST00000371064 (ZDHHC9-005) 129805329-129843460 protein_coding
ENST00000406492 (ZDHHC9-004) 129814771-129843909 protein_coding
ENST00000433917 (ZDHHC9-002) 129811447-129841824 protein_coding
ENST00000491039 (ZDHHC9-003) 129822888-129823788 processed_transcript
ENSG00000238040 (SALL4P2)
spalt-like transcription factor 4 pseudogene 2 		ENST00000423288 (SALL4P2-001) 129871309-129877567 processed_pseudogene
ENSG00000266440 (AL359542.1)
 ENST00000582964 (AL359542.1-201) 129821822-129821922 miRNA
CIL_000010_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036985-ENSMUSG00000063785 CGP 10090 X:48171969-48282453
GeneTranscriptPositionBiotype
ENSMUSG00000036985 (Zdhhc9)
zinc finger, DHHC domain containing 9 		ENSMUST00000037960 (Zdhhc9-001) 48171969-48208687 protein_coding
ENSMUST00000088935 (Zdhhc9-002) 48171969-48208878 protein_coding
ENSMUST00000123054 (Zdhhc9-003) 48181694-48208665 retained_intron
ENSMUST00000127440 (Zdhhc9-004) 48190044-48208602 retained_intron
ENSMUST00000132652 (Zdhhc9-005) 48201730-48208328 processed_transcript
ENSMUST00000149416 (Zdhhc9-006) 48206668-48208658 processed_transcript
ENSMUSG00000063785 (Utp14a)
UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 		ENSMUST00000080713 (Utp14a-001) 48256862-48282453 protein_coding
ENSMUST00000125966 (Utp14a-002) 48256897-48267969 processed_transcript
ENSMUST00000152624 (Utp14a-003) 48256918-48273084 processed_transcript
ENSMUSG00000097197 (9530027J09Rik)
RIKEN cDNA 9530027J09 gene 		ENSMUST00000180584 (9530027J09Rik-201) 48276792-48285426 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000010_0001ENSG00000156697ENST00000394422ENST00000425117ENST00000427972ENST00000498179ENSG00000188706ENST00000357166ENST00000371064ENST00000406492ENST00000433917ENST00000491039ENSG00000238040ENST00000423288ENSG00000266440ENST00000582964CIL_000010_0002ENSMUSG00000036985ENSMUST00000037960ENSMUST00000088935ENSMUST00000123054ENSMUST00000127440ENSMUST00000132652ENSMUST00000149416ENSMUSG00000063785ENSMUST00000080713ENSMUST00000125966ENSMUST00000152624ENSMUSG00000097197ENSMUST00000180584
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000010_0001ENSG00000156697ENST00000394422ENST00000425117ENSG00000188706ENST00000357166ENST00000371064ENST00000406492ENSG00000238040ENST00000423288ENSG00000266440ENST00000582964CIL_000010_0002ENSMUSG00000036985ENSMUST00000037960ENSMUST00000088935ENSMUST00000123054ENSMUSG00000063785ENSMUST00000080713ENSMUST00000125966ENSMUSG00000097197ENSMUST00000180584
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156697 ENST00000394422 3.656±0.00 2.990±0.00 0.848±0.00 1.776±1.34 2.879±1.15 4.958±2.72 0.967±0.61 4.183±0.00 0.923±0.38 1.497±0.45 3.540±2.59 7.336±2.19 5.369±1.47 2.473±1.47
ENST00000425117 N/A 0.717±0.00 N/A 0.957±0.00 1.498±0.00 N/A 0.485±0.02 0.711±0.00 1.139±0.24 0.756±0.05 N/A 0.878±0.00 N/A N/A
ENST00000427972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188706 ENST00000357166 6.846±0.00 1.929±0.00 N/A 10.993±3.55 1.838±0.11 2.404±1.47 1.906±0.00 2.781±0.00 3.559±0.00 3.898±2.27 N/A 5.029±1.15 5.761±1.60 1.961±0.00
ENST00000371064 24.113±0.00 4.317±0.00 N/A 11.117±6.26 4.942±0.67 7.379±3.38 2.285±1.82 6.750±3.55 7.527±4.35 7.485±6.48 3.888±0.00 10.763±6.99 10.290±1.40 3.020±0.99
ENST00000406492 N/A N/A N/A N/A N/A N/A 1.033±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000433917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000238040 ENST00000423288 N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00
ENSG00000266440 ENST00000582964 N/A 0.570±0.00 N/A N/A 0.304±0.00 N/A 0.274±0.00 0.300±0.00 0.275±0.00 N/A N/A 2.674±0.00 0.699±0.00 1.823±1.30
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036985 ENSMUST00000037960 9.039±0.51 4.133±0.40 15.855±1.12 11.636±5.37 7.141±1.20 11.792±0.50 9.091±0.49 28.764±1.58 21.492±12.25 12.218±1.73 2.567±0.54 7.382±2.60 14.265±7.31 3.688±1.96
ENSMUST00000088935 N/A N/A N/A 1.037±0.00 6.796±0.00 N/A N/A N/A 2.535±0.84 N/A 0.954±0.34 4.573±3.05 4.470±2.94 0.385±0.31
ENSMUST00000123054 4.962±1.65 3.975±0.40 N/A N/A 3.429±0.34 6.169±0.75 N/A 10.535±0.26 10.575±0.75 5.238±1.07 N/A 3.262±0.76 N/A N/A
ENSMUST00000127440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063785 ENSMUST00000080713 0.833±0.34 0.755±0.14 5.303±0.30 5.178±0.55 1.212±0.92 1.027±0.48 1.369±0.26 1.217±0.41 3.750±2.89 0.719±0.20 2.854±0.30 3.758±4.53 3.165±1.63 0.784±0.19
ENSMUST00000125966 0.581±0.26 0.394±0.17 N/A N/A 0.527±0.18 0.303±0.00 0.321±0.07 0.349±0.04 0.701±0.00 0.505±0.11 N/A 0.918±0.24 1.344±0.48 0.420±0.00
ENSMUST00000152624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097197 ENSMUST00000180584 0.387±0.05 N/A 2.209±0.01 1.884±0.45 0.347±0.11 0.368±0.10 0.357±0.00 0.248±0.04 1.348±1.14 0.499±0.00 0.848±0.09 1.675±2.05 1.495±0.76 0.420±0.00

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