C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000018_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005522-ENSDARG00000057586 CGP 7955 19:22404269-22558378
GeneTranscriptPositionBiotype
ENSDARG00000005522 (galr1)
galanin receptor 1 		ENSDART00000044943 (galr1-201) 22404546-22407383 protein_coding
ENSDART00000138544 (galr1-001) 22404269-22407924 protein_coding
ENSDARG00000057586 (sall3b)
sal-like 3b (Drosophila) 		ENSDART00000080294 (sall3b-201) 22547104-22556332 protein_coding
ENSDART00000100181 (sall3b-001) 22546499-22558378 protein_coding
ENSDARG00000096383 (si:ch211-150o20.5)
si:ch211-150o20.5 		ENSDART00000151492 (si:ch211-150o20.5-001) 22501188-22502903 lincRNA
CIL_000018_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166573-ENSG00000256463 CGP 9606 18:77250549-79002677
GeneTranscriptPositionBiotype
ENSG00000166573 (GALR1)
galanin receptor 1 		ENST00000299727 (GALR1-001) 77250549-77277896 protein_coding
ENST00000582943 (GALR1-002) 77253740-77256217 processed_transcript
ENSG00000201723 (Y_RNA)
Y RNA 		ENST00000364853 (Y_RNA.1-489) 78544095-78544188 misc_RNA
ENSG00000263146 (RP11-849I19.1)
 ENST00000572007 (RP11-849I19.1-002) 78977288-78977883 lincRNA
ENST00000573860 (RP11-849I19.1-003) 78978351-78979074 lincRNA
ENST00000575722 (RP11-849I19.1-001) 78976555-78978843 lincRNA
ENST00000583511 (RP11-849I19.1-004) 78977095-78978843 lincRNA
ENSG00000264015 (RP11-176N18.2)
 ENST00000583629 (RP11-176N18.2-001) 77421619-77560763 lincRNA
ENSG00000264334 (RP11-671C19.2)
 ENST00000579480 (RP11-671C19.2-001) 77983020-77986610 lincRNA
ENSG00000264736 (BDP1P)
B double prime 1 pseudogene 		ENST00000582658 (BDP1P-001) 77435253-77437242 processed_pseudogene
ENSG00000265101 (CTD-2382H12.1)
 ENST00000580639 (CTD-2382H12.1-001) 78925064-78927441 lincRNA
ENSG00000265843 (LINC01029)
long intergenic non-protein coding RNA 1029 		ENST00000577408 (LINC01029-002) 77971294-77972542 lincRNA
ENST00000578833 (LINC01029-004) 77986874-77993698 lincRNA
ENST00000582805 (LINC01029-003) 77971814-77993722 lincRNA
ENST00000583106 (LINC01029-001) 77971504-77982839 lincRNA
ENSG00000266213 (RP11-100K18.1)
 ENST00000577382 (RP11-100K18.1-001) 78137223-78140887 lincRNA
ENSG00000266273 (RP11-715C4.1)
 ENST00000580487 (RP11-715C4.1-001) 78795612-78796672 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000018_0001ENSDARG00000005522ENSDART00000044943ENSDART00000138544ENSDARG00000057586ENSDART00000080294ENSDART00000100181ENSDARG00000096383ENSDART00000151492CIL_000018_0002ENSG00000166573ENST00000299727ENST00000582943ENSG00000201723ENST00000364853ENSG00000263146ENST00000572007ENST00000573860ENST00000575722ENST00000583511ENSG00000264015ENST00000583629ENSG00000264334ENST00000579480ENSG00000264736ENST00000582658ENSG00000265101ENST00000580639ENSG00000265843ENST00000577408ENST00000578833ENST00000582805ENST00000583106ENSG00000266213ENST00000577382ENSG00000266273ENST00000580487
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000018_0001ENSDARG00000005522ENSDART00000044943ENSDART00000138544ENSDARG00000057586ENSDART00000080294ENSDART00000100181ENSDARG00000096383ENSDART00000151492CIL_000018_0002ENSG00000166573ENST00000299727ENSG00000201723ENST00000364853ENSG00000263146ENST00000572007ENST00000573860ENST00000575722ENST00000583511ENSG00000264015ENST00000583629ENSG00000264334ENST00000579480ENSG00000264736ENST00000582658ENSG00000265101ENST00000580639ENSG00000265843ENST00000577408ENST00000578833ENST00000582805ENSG00000266213ENST00000577382ENSG00000266273ENST00000580487
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005522 ENSDART00000044943 N/A N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000138544 N/A N/A N/A 1.108±0.48 N/A N/A N/A 0.122±0.04 N/A N/A 0.087±0.00 N/A N/A N/A
ENSDARG00000057586 ENSDART00000080294 N/A N/A N/A 0.646±0.21 N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A
ENSDART00000100181 N/A N/A N/A 0.810±0.33 N/A N/A 0.081±0.07 0.053±0.02 N/A N/A 0.081±0.00 N/A N/A N/A
ENSDARG00000096383 ENSDART00000151492 N/A N/A N/A 0.234±0.14 N/A N/A 0.199±0.00 0.075±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166573 ENST00000299727 0.114±0.00 0.048±0.00 0.029±0.00 0.204±0.09 0.080±0.00 0.098±0.00 0.014±0.01 0.016±0.01 0.022±0.02 0.031±0.00 0.001±0.00 0.010±0.01 0.003±0.00 0.078±0.01
ENST00000582943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201723 ENST00000364853 N/A N/A N/A N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000263146 ENST00000572007 N/A N/A N/A 2.378±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 2.093±0.00
ENST00000573860 N/A N/A N/A N/A N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000575722 N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A
ENST00000583511 N/A N/A 0.412±0.00 5.707±0.00 N/A N/A N/A 1.688±0.00 N/A N/A N/A N/A N/A 1.756±0.10
ENSG00000264015 ENST00000583629 N/A 0.193±0.00 0.186±0.00 0.136±0.00 0.159±0.00 0.148±0.00 N/A N/A 0.199±0.00 0.062±0.03 N/A 0.517±0.00 N/A 0.248±0.00
ENSG00000264334 ENST00000579480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.142±0.01
ENSG00000264736 ENST00000582658 N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A 0.005±0.00
ENSG00000265101 ENST00000580639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.07
ENSG00000265843 ENST00000577408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.494±0.30
ENST00000578833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.218±0.00
ENST00000582805 N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.142±0.00
ENST00000583106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266213 ENST00000577382 N/A N/A N/A 0.006±0.00 N/A 0.267±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266273 ENST00000580487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.997±0.42

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