C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109381-ENSG00000137463 CGP 9606 4:139028112-139280338
GeneTranscriptPositionBiotype
ENSG00000109381 (ELF2)
E74-like factor 2 (ets domain transcription factor) 		ENST00000358635 (ELF2-002) 139057855-139084496 protein_coding
ENST00000379549 (ELF2-201) 139057717-139084414 protein_coding
ENST00000379550 (ELF2-202) 139057717-139139476 protein_coding
ENST00000394235 (ELF2-001) 139057220-139177218 protein_coding
ENST00000420916 (ELF2-009) 139060479-139084337 protein_coding
ENST00000504314 (ELF2-010) 139061937-139072220 retained_intron
ENST00000510408 (ELF2-006) 139058719-139084325 protein_coding
ENST00000511006 (ELF2-003) 139136771-139177218 retained_intron
ENST00000511184 (ELF2-004) 139101591-139177199 nonsense_mediated_decay
ENST00000512627 (ELF2-008) 139060601-139084224 protein_coding
ENST00000514577 (ELF2-011) 139061867-139073719 retained_intron
ENST00000514606 (ELF2-005) 139066010-139084338 retained_intron
ENST00000515489 (ELF2-013) 139028112-139060595 processed_transcript
ENSG00000109390 (NDUFC1)
NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 		ENST00000394223 (NDUFC1-004) 139290031-139302479 protein_coding
ENST00000394225 (NDUFC1-005) 139289953-139302526 processed_transcript
ENST00000394228 (NDUFC1-001) 139289917-139302551 protein_coding
ENST00000503453 (NDUFC1-009) 139289953-139301420 processed_transcript
ENST00000503997 (NDUFC1-002) 139266880-139295815 nonsense_mediated_decay
ENST00000505036 (NDUFC1-003) 139289938-139301204 protein_coding
ENST00000507764 (NDUFC1-007) 139295732-139301210 processed_transcript
ENST00000513022 (NDUFC1-006) 139295118-139301233 processed_transcript
ENST00000539002 (NDUFC1-201) 139289917-139301210 protein_coding
ENST00000539387 (NDUFC1-202) 139289917-139302551 protein_coding
ENST00000544855 (NDUFC1-203) 139289917-139301210 protein_coding
ENSG00000137463 (MGARP)
mitochondria-localized glutamic acid-rich protein 		ENST00000398955 (MGARP-001) 139266163-139280338 protein_coding
ENSG00000151014 (CCRN4L)
CCR4 carbon catabolite repression 4-like (S. cerevisiae) 		ENST00000280614 (CCRN4L-001) 139015789-139045752 protein_coding
ENST00000515616 (CCRN4L-003) 139043072-139045105 retained_intron
ENSG00000179967 (PPP1R14BP3)
protein phosphatase 1, regulatory (inhibitor) subunit 14B pseudogene 3 		ENST00000509033 (PPP1R14BP3-001) 139114930-139115374 processed_pseudogene
ENSG00000207384 (Y_RNA)
Y RNA 		ENST00000384654 (Y_RNA.1-749) 139200395-139200513 misc_RNA
ENSG00000240723 (RN7SL382P)
RNA, 7SL, cytoplasmic 382, pseudogene 		ENST00000482631 (RN7SL382P-201) 139100377-139100658 misc_RNA
ENSG00000252362 (RNU6-506P)
RNA, U6 small nuclear 506, pseudogene 		ENST00000516553 (RNU6-506P-201) 139231026-139231119 snRNA
ENSG00000252503 (RNU6-531P)
RNA, U6 small nuclear 531, pseudogene 		ENST00000516694 (RNU6-531P-201) 139055475-139055578 snRNA
ENSG00000265892 (RN7SL311P)
RNA, 7SL, cytoplasmic 311, pseudogene 		ENST00000579858 (RN7SL311P-201) 139185441-139185746 misc_RNA
ENSG00000276396 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000615106 (Metazoa_SRP.1-369) 139155153-139155444 misc_RNA
CIL_00001P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037174-ENSMUSG00000037161 CGP 10090 3:51255665-51396738
GeneTranscriptPositionBiotype
ENSMUSG00000037161 (Mgarp)
mitochondria localized glutamic acid rich protein 		ENSMUST00000038154 (Mgarp-001) 51388415-51396548 protein_coding
ENSMUST00000108046 (Mgarp-002) 51388415-51396502 protein_coding
ENSMUST00000141156 (Mgarp-003) 51388772-51396738 protein_coding
ENSMUST00000145938 (Mgarp-005) 51391261-51396488 processed_transcript
ENSMUST00000157054 (Mgarp-004) 51390820-51396503 retained_intron
ENSMUSG00000037174 (Elf2)
E74-like factor 2 		ENSMUST00000062009 (Elf2-002) 51255665-51340644 protein_coding
ENSMUST00000091144 (Elf2-001) 51255665-51340566 protein_coding
ENSMUST00000108051 (Elf2-004) 51255665-51277514 protein_coding
ENSMUST00000108053 (Elf2-003) 51255665-51277514 protein_coding
ENSMUST00000156983 (Elf2-008) 51266510-51277365 retained_intron
ENSMUST00000163748 (Elf2-201) 51255685-51325987 protein_coding
ENSMUST00000183338 (Elf2-005) 51264869-51340658 nonsense_mediated_decay
ENSMUST00000183463 (Elf2-006) 51255665-51340566 nonsense_mediated_decay
ENSMUST00000184677 (Elf2-007) 51264886-51277424 nonsense_mediated_decay
ENSMUSG00000087440 (4930577N17Rik)
RIKEN cDNA 4930577N17 gene 		ENSMUST00000139771 (4930577N17Rik-001) 51277571-51279805 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001P_0001ENSG00000109381ENST00000358635ENST00000379549ENST00000379550ENST00000394235ENST00000510408ENST00000511184ENST00000512627ENST00000514577ENSG00000109390ENST00000394223ENST00000394225ENST00000503453ENST00000505036ENST00000507764ENST00000539002ENST00000539387ENSG00000137463ENST00000398955ENSG00000151014ENST00000280614ENST00000515616ENSG00000179967ENST00000509033ENSG00000207384ENST00000384654ENSG00000240723ENST00000482631ENSG00000252362ENST00000516553ENSG00000252503ENST00000516694ENSG00000265892ENST00000579858ENSG00000276396ENST00000615106CIL_00001P_0002ENSMUSG00000037161ENSMUST00000038154ENSMUST00000108046ENSMUST00000141156ENSMUST00000145938ENSMUST00000157054ENSMUSG00000037174ENSMUST00000062009ENSMUST00000091144ENSMUST00000108051ENSMUST00000108053ENSMUST00000163748ENSMUST00000183338ENSMUSG00000087440ENSMUST00000139771
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109381 ENST00000358635 2.322±0.00 5.414±0.00 N/A 1.480±0.00 3.849±0.00 3.180±0.00 2.222±0.00 1.876±0.00 1.261±0.00 3.868±0.00 2.227±0.00 4.366±2.08 2.671±0.31 5.111±0.00
ENST00000379549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.121±0.00 N/A N/A
ENST00000379550 2.908±0.00 1.529±0.00 1.797±0.00 2.269±0.57 2.779±1.71 2.560±0.52 1.649±0.14 2.889±0.99 5.053±4.58 5.803±0.74 2.239±0.04 2.503±0.63 3.386±2.27 15.100±9.79
ENST00000394235 1.007±0.00 N/A 1.542±0.00 N/A 1.389±0.00 N/A 0.456±0.00 0.722±0.00 0.252±0.00 2.908±0.00 N/A 1.122±0.07 N/A N/A
ENST00000420916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510408 4.496±0.00 6.562±0.00 N/A 2.150±0.00 3.477±0.00 2.807±0.00 1.398±0.51 2.771±0.00 N/A N/A 1.283±0.00 3.038±0.38 2.972±0.34 6.366±0.00
ENST00000511006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511184 N/A N/A 1.810±0.00 N/A 2.916±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.857±0.00
ENST00000514577 N/A N/A N/A N/A N/A N/A 2.897±0.00 5.163±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000109390 ENST00000394223 N/A N/A 3.900±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 62.853±0.00 41.401±0.00 112.458±0.00
ENST00000394225 4.363±0.00 4.439±0.00 N/A 8.120±0.00 N/A 2.856±0.00 2.717±0.00 N/A N/A N/A N/A 24.593±0.00 N/A N/A
ENST00000394228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503453 11.717±0.00 18.271±0.00 N/A 23.723±0.00 14.355±0.00 16.192±13.46 81.468±0.00 28.648±23.21 37.269±0.00 26.643±0.00 23.781±16.53 38.592±8.09 23.957±3.90 41.281±0.00
ENST00000503997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505036 N/A N/A N/A 1.913±0.00 1.742±0.87 N/A 1.739±0.00 N/A N/A 4.701±0.00 9.681±0.00 N/A N/A 23.909±0.00
ENST00000507764 1.740±0.00 N/A N/A 7.548±0.00 3.062±0.00 6.336±0.00 N/A 8.781±0.00 N/A N/A N/A 1.519±0.00 N/A N/A
ENST00000513022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539002 N/A N/A 1.543±0.00 2.643±0.00 0.675±0.00 0.711±0.00 10.842±4.78 2.697±0.00 1.538±0.00 1.657±0.00 3.537±0.52 N/A N/A N/A
ENST00000539387 N/A N/A N/A N/A N/A N/A N/A N/A 2.893±0.00 N/A N/A N/A 13.774±3.86 N/A
ENST00000544855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137463 ENST00000398955 N/A N/A N/A N/A N/A N/A N/A N/A 0.848±0.00 N/A N/A 16.786±11.61 N/A 7.188±0.00
ENSG00000151014 ENST00000280614 N/A 0.807±0.00 1.533±0.00 1.788±0.00 0.950±0.00 N/A 1.033±0.10 2.330±1.54 1.224±0.43 1.353±0.76 2.848±2.37 0.880±0.28 1.924±0.25 1.262±0.00
ENST00000515616 N/A 1.505±0.00 N/A N/A N/A 0.375±0.00 N/A N/A N/A 2.593±0.00 1.112±0.00 N/A N/A N/A
ENSG00000179967 ENST00000509033 0.735±0.00 0.967±0.00 0.262±0.00 0.449±0.01 1.336±0.18 1.043±0.15 0.293±0.22 0.868±0.20 0.262±0.04 2.469±1.04 0.965±0.16 0.793±0.45 0.566±0.12 0.883±0.26
ENSG00000207384 ENST00000384654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.537±0.00
ENSG00000240723 ENST00000482631 0.313±0.00 N/A N/A N/A 0.069±0.00 N/A 0.062±0.00 N/A N/A 0.265±0.00 N/A N/A N/A N/A
ENSG00000252362 ENST00000516553 N/A 1.513±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252503 ENST00000516694 N/A N/A N/A N/A 2.879±0.00 0.633±0.00 N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A
ENSG00000265892 ENST00000579858 N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000276396 ENST00000615106 0.211±0.00 0.168±0.00 N/A 0.293±0.00 N/A N/A 0.206±0.00 0.373±0.00 N/A N/A N/A 0.964±0.00 N/A 0.168±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037161 ENSMUST00000038154 0.205±0.04 209.962±33.77 1.162±0.26 0.380±0.12 0.206±0.12 0.727±0.35 N/A 0.236±0.14 0.292±0.23 N/A 0.112±0.07 118.679±40.04 0.632±0.15 6.612±0.80
ENSMUST00000108046 N/A N/A 0.111±0.00 0.049±0.00 N/A N/A 0.099±0.03 N/A 0.162±0.02 N/A 0.095±0.00 N/A 0.349±0.28 1.388±0.00
ENSMUST00000141156 0.169±0.00 108.834±7.56 0.541±0.00 0.284±0.06 0.197±0.05 0.215±0.00 0.134±0.04 0.244±0.11 0.152±0.00 0.080±0.02 0.105±0.00 153.611±134.10 1.147±1.24 9.107±5.33
ENSMUST00000145938 N/A 198.916±35.18 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A
ENSMUST00000157054 N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000037174 ENSMUST00000062009 6.231±2.71 5.085±0.00 5.326±0.81 4.875±1.11 3.912±0.00 4.601±0.30 N/A 2.428±0.32 6.703±2.01 7.129±1.52 1.985±0.46 7.878±3.01 6.396±0.20 21.044±6.50
ENSMUST00000091144 N/A N/A N/A N/A 4.362±0.00 N/A N/A N/A N/A N/A 2.067±0.00 N/A N/A N/A
ENSMUST00000108051 5.367±1.89 8.920±2.95 9.197±0.00 5.056±0.00 6.321±2.30 8.143±1.90 4.356±0.00 4.011±1.32 3.188±0.62 6.201±0.72 2.857±1.30 10.731±3.39 7.107±2.50 N/A
ENSMUST00000108053 2.547±0.44 4.317±0.35 4.517±0.00 N/A 5.864±2.18 3.197±0.36 N/A 2.400±0.68 1.929±0.57 6.801±0.00 N/A 7.609±2.06 3.371±0.34 N/A
ENSMUST00000156983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163748 2.610±0.22 N/A 3.195±0.58 6.985±0.81 N/A N/A 3.175±0.01 1.592±0.18 6.070±2.60 N/A 2.092±0.31 19.950±7.83 16.529±10.87 25.738±13.28
ENSMUST00000183338 N/A N/A N/A N/A N/A 7.668±0.00 N/A N/A N/A N/A N/A 14.148±0.00 N/A 53.976±0.00
ENSMUST00000183463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087440 ENSMUST00000139771 0.531±0.49 N/A 0.824±0.07 0.369±0.01 0.589±0.06 0.536±0.34 0.320±0.13 0.338±0.11 0.382±0.18 0.483±0.21 0.617±0.04 0.649±0.14 0.629±0.43 0.310±0.19

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