C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151012-ENSG00000151014 CGP 9606 4:138164097-139045752
GeneTranscriptPositionBiotype
ENSG00000109381 (ELF2)
E74-like factor 2 (ets domain transcription factor) 		ENST00000358635 (ELF2-002) 139057855-139084496 protein_coding
ENST00000379549 (ELF2-201) 139057717-139084414 protein_coding
ENST00000379550 (ELF2-202) 139057717-139139476 protein_coding
ENST00000394235 (ELF2-001) 139057220-139177218 protein_coding
ENST00000420916 (ELF2-009) 139060479-139084337 protein_coding
ENST00000504314 (ELF2-010) 139061937-139072220 retained_intron
ENST00000510408 (ELF2-006) 139058719-139084325 protein_coding
ENST00000511006 (ELF2-003) 139136771-139177218 retained_intron
ENST00000511184 (ELF2-004) 139101591-139177199 nonsense_mediated_decay
ENST00000512627 (ELF2-008) 139060601-139084224 protein_coding
ENST00000514577 (ELF2-011) 139061867-139073719 retained_intron
ENST00000514606 (ELF2-005) 139066010-139084338 retained_intron
ENST00000515489 (ELF2-013) 139028112-139060595 processed_transcript
ENSG00000151012 (SLC7A11)
solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 		ENST00000280612 (SLC7A11-001) 138164097-138242349 protein_coding
ENST00000509248 (SLC7A11-002) 138171844-138223244 nonsense_mediated_decay
ENSG00000151014 (CCRN4L)
CCR4 carbon catabolite repression 4-like (S. cerevisiae) 		ENST00000280614 (CCRN4L-001) 139015789-139045752 protein_coding
ENST00000515616 (CCRN4L-003) 139043072-139045105 retained_intron
ENSG00000238971 (AC093766.1)
 ENST00000408086 (AC093766.1-201) 138811678-138811766 miRNA
ENSG00000248305 (RP11-310A13.2)
 ENST00000506991 (RP11-310A13.2-001) 138481255-138482096 processed_pseudogene
ENSG00000248397 (LINC00498)
long intergenic non-protein coding RNA 498 		ENST00000504369 (LINC00498-001) 138298856-138312658 lincRNA
ENSG00000248795 (RP11-173E2.1)
 ENST00000502915 (RP11-173E2.1-001) 138560704-138561941 processed_pseudogene
ENSG00000249091 (RP11-733C7.1)
 ENST00000507220 (RP11-733C7.1-001) 138277115-138281784 lincRNA
ENSG00000249381 (LINC00500)
long intergenic non-protein coding RNA 500 		ENST00000515860 (LINC00500-001) 138425523-138436869 lincRNA
ENSG00000250501 (RP11-98O2.1)
 ENST00000502606 (RP11-98O2.1-002) 138773550-138801639 lincRNA
ENST00000513400 (RP11-98O2.1-003) 138773588-138801329 lincRNA
ENSG00000250577 (RP11-577B7.1)
 ENST00000506416 (RP11-577B7.1-001) 138923930-138924232 lincRNA
ENSG00000250977 (RP11-173E2.2)
 ENST00000506232 (RP11-173E2.2-001) 138664725-138665569 lincRNA
ENSG00000251372 (LINC00499)
long intergenic non-protein coding RNA 499 		ENST00000502757 (LINC00499-002) 138309711-138313720 lincRNA
ENST00000507145 (LINC00499-004) 138309712-138424344 lincRNA
ENST00000510736 (LINC00499-003) 138309742-138424149 lincRNA
ENST00000515282 (LINC00499-001) 138309742-138349833 lincRNA
ENSG00000264953 (AC093602.1)
 ENST00000580602 (AC093602.1-201) 139017493-139017579 miRNA
CIL_00001Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027737-ENSMUSG00000023087 CGP 10090 3:50364936-51251644
GeneTranscriptPositionBiotype
ENSMUSG00000023087 (Ccrn4l)
CCR4 carbon catabolite repression 4-like (S. cerevisiae) 		ENSMUST00000023849 (Ccrn4l-001) 51224447-51251644 protein_coding
ENSMUST00000144826 (Ccrn4l-002) 51240206-51251624 retained_intron
ENSMUST00000167780 (Ccrn4l-201) 51224470-51251631 protein_coding
ENSMUSG00000027737 (Slc7a11)
solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 		ENSMUST00000029297 (Slc7a11-001) 50364936-50443613 protein_coding
ENSMUST00000142932 (Slc7a11-002) 50415970-50443613 retained_intron
ENSMUSG00000102067 (RP24-88F2.1)
predicted gene 29230 		ENSMUST00000189687 (RP24-88F2.1-001) 51058910-51074856 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001Q_0001ENSG00000109381ENST00000358635ENST00000379549ENST00000379550ENST00000394235ENST00000420916ENST00000504314ENST00000510408ENST00000511006ENST00000511184ENST00000512627ENST00000514577ENST00000514606ENST00000515489ENSG00000151012ENST00000280612ENST00000509248ENSG00000151014ENST00000280614ENST00000515616ENSG00000238971ENST00000408086ENSG00000248305ENST00000506991ENSG00000248397ENST00000504369ENSG00000248795ENST00000502915ENSG00000249091ENST00000507220ENSG00000249381ENST00000515860ENSG00000250501ENST00000502606ENST00000513400ENSG00000250577ENST00000506416ENSG00000250977ENST00000506232ENSG00000251372ENST00000502757ENST00000507145ENST00000510736ENST00000515282ENSG00000264953ENST00000580602CIL_00001Q_0002ENSMUSG00000023087ENSMUST00000023849ENSMUST00000144826ENSMUST00000167780ENSMUSG00000027737ENSMUST00000029297ENSMUST00000142932ENSMUSG00000102067ENSMUST00000189687
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001Q_0001ENSG00000109381ENST00000358635ENST00000379549ENST00000379550ENST00000394235ENST00000510408ENST00000511184ENST00000512627ENST00000514577ENSG00000151012ENST00000280612ENSG00000151014ENST00000280614ENST00000515616ENSG00000238971ENST00000408086ENSG00000248305ENST00000506991ENSG00000248397ENST00000504369ENSG00000248795ENST00000502915ENSG00000249091ENST00000507220ENSG00000249381ENST00000515860ENSG00000250501ENST00000502606ENSG00000250577ENST00000506416ENSG00000250977ENST00000506232ENSG00000251372ENST00000502757ENST00000510736ENST00000515282ENSG00000264953ENST00000580602CIL_00001Q_0002ENSMUSG00000023087ENSMUST00000023849ENSMUST00000144826ENSMUST00000167780ENSMUSG00000027737ENSMUST00000029297ENSMUST00000142932ENSMUSG00000102067ENSMUST00000189687
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109381 ENST00000358635 2.322±0.00 5.414±0.00 N/A 1.480±0.00 3.849±0.00 3.180±0.00 2.222±0.00 1.876±0.00 1.261±0.00 3.868±0.00 2.227±0.00 4.366±2.08 2.671±0.31 5.111±0.00
ENST00000379549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.121±0.00 N/A N/A
ENST00000379550 2.908±0.00 1.529±0.00 1.797±0.00 2.269±0.57 2.779±1.71 2.560±0.52 1.649±0.14 2.889±0.99 5.053±4.58 5.803±0.74 2.239±0.04 2.503±0.63 3.386±2.27 15.100±9.79
ENST00000394235 1.007±0.00 N/A 1.542±0.00 N/A 1.389±0.00 N/A 0.456±0.00 0.722±0.00 0.252±0.00 2.908±0.00 N/A 1.122±0.07 N/A N/A
ENST00000420916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510408 4.496±0.00 6.562±0.00 N/A 2.150±0.00 3.477±0.00 2.807±0.00 1.398±0.51 2.771±0.00 N/A N/A 1.283±0.00 3.038±0.38 2.972±0.34 6.366±0.00
ENST00000511006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511184 N/A N/A 1.810±0.00 N/A 2.916±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.857±0.00
ENST00000514577 N/A N/A N/A N/A N/A N/A 2.897±0.00 5.163±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151012 ENST00000280612 0.253±0.00 0.165±0.00 0.006±0.00 2.778±0.31 0.060±0.00 N/A 0.036±0.00 0.020±0.00 0.009±0.00 0.501±0.00 0.004±0.00 1.675±1.47 0.128±0.00 0.613±0.06
ENST00000509248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151014 ENST00000280614 N/A 0.807±0.00 1.533±0.00 1.788±0.00 0.950±0.00 N/A 1.033±0.10 2.330±1.54 1.224±0.43 1.353±0.76 2.848±2.37 0.880±0.28 1.924±0.25 1.262±0.00
ENST00000515616 N/A 1.505±0.00 N/A N/A N/A 0.375±0.00 N/A N/A N/A 2.593±0.00 1.112±0.00 N/A N/A N/A
ENSG00000238971 ENST00000408086 N/A N/A N/A 0.231±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.862±0.00
ENSG00000248305 ENST00000506991 N/A N/A N/A N/A 0.068±0.04 0.028±0.00 0.014±0.00 0.015±0.00 N/A N/A N/A 0.014±0.00 N/A 0.027±0.00
ENSG00000248397 ENST00000504369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.36
ENSG00000248795 ENST00000502915 0.051±0.00 0.037±0.00 N/A 0.021±0.00 0.020±0.00 N/A N/A 0.020±0.00 N/A 0.080±0.00 0.016±0.00 0.072±0.00 N/A 0.231±0.15
ENSG00000249091 ENST00000507220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.02
ENSG00000249381 ENST00000515860 0.037±0.00 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A 0.096±0.02
ENSG00000250501 ENST00000502606 0.178±0.00 0.284±0.00 N/A 0.221±0.00 0.103±0.00 0.060±0.00 0.086±0.00 0.222±0.00 0.080±0.00 0.022±0.00 0.023±0.00 0.047±0.00 0.045±0.00 0.127±0.02
ENST00000513400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250577 ENST00000506416 0.183±0.00 0.304±0.00 N/A 0.092±0.00 0.042±0.00 0.192±0.00 0.038±0.00 0.127±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000250977 ENST00000506232 N/A N/A N/A 0.181±0.00 N/A N/A N/A 0.146±0.00 N/A 0.782±0.00 N/A N/A N/A N/A
ENSG00000251372 ENST00000502757 N/A 0.152±0.00 N/A 0.684±0.08 N/A N/A 0.057±0.04 N/A 0.019±0.00 0.149±0.00 N/A N/A 0.050±0.00 0.100±0.00
ENST00000507145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510736 N/A N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A 0.148±0.00
ENST00000515282 N/A N/A N/A 0.712±0.35 N/A 0.151±0.00 N/A N/A N/A N/A N/A N/A N/A 0.067±0.03
ENSG00000264953 ENST00000580602 N/A N/A N/A N/A N/A N/A 0.415±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023087 ENSMUST00000023849 N/A 1.542±0.04 N/A N/A N/A N/A N/A N/A 0.967±0.00 N/A N/A 3.126±1.63 N/A N/A
ENSMUST00000144826 8.420±0.63 2.998±0.83 10.147±1.59 3.848±1.16 7.317±1.80 8.901±0.70 4.743±0.32 6.100±0.70 8.196±6.63 6.995±0.37 6.914±0.82 5.983±2.99 73.784±25.75 4.495±1.33
ENSMUST00000167780 3.525±1.16 6.199±2.36 N/A N/A 4.518±1.07 18.495±3.11 5.826±0.86 1.891±0.00 5.883±5.19 2.016±0.18 N/A 4.386±1.82 N/A N/A
ENSMUSG00000027737 ENSMUST00000029297 1.470±1.44 0.087±0.05 0.116±0.04 0.660±0.33 0.499±0.21 0.193±0.05 0.009±0.01 0.035±0.01 0.049±0.05 0.341±0.24 0.011±0.01 1.638±0.52 0.181±0.18 0.598±0.32
ENSMUST00000142932 0.023±0.00 N/A N/A N/A N/A 0.069±0.00 0.009±0.00 0.029±0.00 0.037±0.02 N/A 0.007±0.00 N/A N/A N/A
ENSMUSG00000102067 ENSMUST00000189687 N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 0.411±0.27

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