C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000026_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069318-ENSDARG00000069307 CGP 7955 20:42922636-43004362
GeneTranscriptPositionBiotype
ENSDARG00000069307 (pomcb)
proopiomelanocortin b 		ENSDART00000100751 (pomcb-001) 43000548-43004362 protein_coding
ENSDARG00000069318 (efr3bb)
EFR3 homolog Bb (S. cerevisiae) 		ENSDART00000100761 (efr3bb-201) 42923265-42991542 protein_coding
ENSDART00000134855 (efr3bb-001) 42922636-42991668 protein_coding
ENSDART00000153240 (efr3bb-002) 42922636-42951586 retained_intron

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000026_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000084710-ENSG00000115138 CGP 9606 2:25042130-25168903
GeneTranscriptPositionBiotype
ENSG00000084710 (EFR3B)
EFR3 homolog B (S. cerevisiae) 		ENST00000264719 (EFR3B-005) 25121673-25154361 protein_coding
ENST00000401432 (EFR3B-002) 25042130-25147888 protein_coding
ENST00000402191 (EFR3B-001) 25042463-25155374 protein_coding
ENST00000403714 (EFR3B-003) 25042130-25159137 protein_coding
ENST00000405108 (EFR3B-004) 25115988-25154565 protein_coding
ENSG00000115138 (POMC)
proopiomelanocortin 		ENST00000264708 (POMC-002) 25160985-25168571 protein_coding
ENST00000380794 (POMC-201) 25160853-25168690 protein_coding
ENST00000395826 (POMC-004) 25161053-25168604 protein_coding
ENST00000405623 (POMC-001) 25160915-25168903 protein_coding
ENST00000449220 (POMC-003) 25161146-25168571 protein_coding
ENSG00000229593 (SUCLA2P3)
succinate-CoA ligase, ADP-forming, beta subunit pseudogene 3 		ENST00000458157 (SUCLA2P3-001) 25079901-25081689 processed_pseudogene
ENSG00000276653 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000461754 (Metazoa_SRP.1-382) 25058032-25058329 misc_RNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000026_0001ENSDARG00000069307ENSDART00000100751ENSDARG00000069318ENSDART00000100761ENSDART00000134855ENSDART00000153240CIL_000026_0002ENSG00000084710ENST00000264719ENST00000401432ENST00000402191ENST00000403714ENST00000405108ENSG00000115138ENST00000264708ENST00000380794ENST00000395826ENST00000405623ENST00000449220ENSG00000229593ENST00000458157ENSG00000276653ENST00000461754
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000026_0001ENSDARG00000069307ENSDART00000100751ENSDARG00000069318ENSDART00000100761ENSDART00000134855CIL_000026_0002ENSG00000084710ENST00000264719ENST00000401432ENST00000402191ENST00000403714ENST00000405108ENSG00000115138ENST00000264708ENST00000380794ENST00000395826ENST00000405623ENST00000449220ENSG00000229593ENST00000458157ENSG00000276653ENST00000461754
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069307 ENSDART00000100751 N/A N/A N/A 2.523±0.00 N/A N/A 0.253±0.00 0.304±0.00 N/A N/A 0.099±0.00 N/A N/A N/A
ENSDARG00000069318 ENSDART00000100761 N/A N/A N/A 5.402±0.00 N/A N/A 0.281±0.00 N/A N/A N/A 0.173±0.00 N/A N/A N/A
ENSDART00000134855 N/A N/A N/A N/A N/A N/A 0.707±0.58 1.007±0.00 0.568±0.00 N/A 0.185±0.00 N/A N/A N/A
ENSDART00000153240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000084710 ENST00000264719 N/A N/A 0.164±0.00 N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A 1.431±0.00
ENST00000401432 N/A 0.145±0.00 N/A N/A 0.120±0.00 0.118±0.00 N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A
ENST00000402191 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 0.043±0.00 N/A N/A N/A N/A N/A
ENST00000403714 0.153±0.00 0.466±0.00 N/A 10.015±3.38 0.292±0.00 0.210±0.05 0.794±0.41 N/A 0.314±0.00 1.019±0.34 1.125±0.00 0.236±0.00 N/A N/A
ENST00000405108 N/A N/A N/A 4.482±0.00 0.531±0.00 N/A N/A N/A N/A N/A 1.116±0.00 0.333±0.00 N/A N/A
ENSG00000115138 ENST00000264708 N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 0.602±0.00 0.403±0.00 N/A N/A 1.071±0.00
ENST00000380794 N/A 0.125±0.00 N/A 0.025±0.00 0.698±0.00 0.391±0.00 0.281±0.00 N/A N/A 0.500±0.00 N/A 0.312±0.12 3.733±2.66 1.529±0.00
ENST00000395826 0.492±0.00 0.939±0.00 N/A 1.394±0.00 4.124±0.00 0.857±0.00 0.558±0.00 N/A N/A 0.302±0.00 0.481±0.00 N/A 5.550±3.09 3.626±3.20
ENST00000405623 0.331±0.00 0.275±0.00 N/A 0.054±0.00 0.526±0.00 N/A 0.218±0.00 N/A 0.230±0.00 N/A N/A N/A 1.508±0.41 2.062±0.00
ENST00000449220 N/A N/A N/A N/A N/A 0.805±0.00 0.321±0.00 0.347±0.00 N/A N/A N/A 0.166±0.06 N/A N/A
ENSG00000229593 ENST00000458157 0.009±0.00 N/A N/A 0.027±0.00 0.043±0.03 N/A 0.025±0.00 0.018±0.00 N/A N/A N/A N/A N/A 0.027±0.01
ENSG00000276653 ENST00000461754 N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00

Loading