C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000026_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069318-ENSDARG00000069307 CGP 7955 20:42922636-43004362
GeneTranscriptPositionBiotype
ENSDARG00000069307 (pomcb)
proopiomelanocortin b 		ENSDART00000100751 (pomcb-001) 43000548-43004362 protein_coding
ENSDARG00000069318 (efr3bb)
EFR3 homolog Bb (S. cerevisiae) 		ENSDART00000100761 (efr3bb-201) 42923265-42991542 protein_coding
ENSDART00000134855 (efr3bb-001) 42922636-42991668 protein_coding
ENSDART00000153240 (efr3bb-002) 42922636-42951586 retained_intron
CIL_000026_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000084710-ENSG00000115138 CGP 9606 2:25042130-25168903
GeneTranscriptPositionBiotype
ENSG00000084710 (EFR3B)
EFR3 homolog B (S. cerevisiae) 		ENST00000264719 (EFR3B-005) 25121673-25154361 protein_coding
ENST00000401432 (EFR3B-002) 25042130-25147888 protein_coding
ENST00000402191 (EFR3B-001) 25042463-25155374 protein_coding
ENST00000403714 (EFR3B-003) 25042130-25159137 protein_coding
ENST00000405108 (EFR3B-004) 25115988-25154565 protein_coding
ENSG00000115138 (POMC)
proopiomelanocortin 		ENST00000264708 (POMC-002) 25160985-25168571 protein_coding
ENST00000380794 (POMC-201) 25160853-25168690 protein_coding
ENST00000395826 (POMC-004) 25161053-25168604 protein_coding
ENST00000405623 (POMC-001) 25160915-25168903 protein_coding
ENST00000449220 (POMC-003) 25161146-25168571 protein_coding
ENSG00000229593 (SUCLA2P3)
succinate-CoA ligase, ADP-forming, beta subunit pseudogene 3 		ENST00000458157 (SUCLA2P3-001) 25079901-25081689 processed_pseudogene
ENSG00000276653 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000461754 (Metazoa_SRP.1-382) 25058032-25058329 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000026_0001ENSDARG00000069307ENSDART00000100751ENSDARG00000069318ENSDART00000100761ENSDART00000134855ENSDART00000153240CIL_000026_0002ENSG00000084710ENST00000264719ENST00000401432ENST00000402191ENST00000403714ENST00000405108ENSG00000115138ENST00000264708ENST00000380794ENST00000395826ENST00000405623ENST00000449220ENSG00000229593ENST00000458157ENSG00000276653ENST00000461754
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000026_0001ENSDARG00000069307ENSDART00000100751ENSDARG00000069318ENSDART00000100761ENSDART00000134855CIL_000026_0002ENSG00000084710ENST00000264719ENST00000401432ENST00000402191ENST00000403714ENST00000405108ENSG00000115138ENST00000264708ENST00000380794ENST00000395826ENST00000405623ENST00000449220ENSG00000229593ENST00000458157ENSG00000276653ENST00000461754
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069307 ENSDART00000100751 N/A N/A N/A 2.523±0.00 N/A N/A 0.253±0.00 0.304±0.00 N/A N/A 0.099±0.00 N/A N/A N/A
ENSDARG00000069318 ENSDART00000100761 N/A N/A N/A 5.402±0.00 N/A N/A 0.281±0.00 N/A N/A N/A 0.173±0.00 N/A N/A N/A
ENSDART00000134855 N/A N/A N/A N/A N/A N/A 0.707±0.58 1.007±0.00 0.568±0.00 N/A 0.185±0.00 N/A N/A N/A
ENSDART00000153240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000084710 ENST00000264719 N/A N/A 0.164±0.00 N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A 1.431±0.00
ENST00000401432 N/A 0.145±0.00 N/A N/A 0.120±0.00 0.118±0.00 N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A
ENST00000402191 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 0.043±0.00 N/A N/A N/A N/A N/A
ENST00000403714 0.153±0.00 0.466±0.00 N/A 10.015±3.38 0.292±0.00 0.210±0.05 0.794±0.41 N/A 0.314±0.00 1.019±0.34 1.125±0.00 0.236±0.00 N/A N/A
ENST00000405108 N/A N/A N/A 4.482±0.00 0.531±0.00 N/A N/A N/A N/A N/A 1.116±0.00 0.333±0.00 N/A N/A
ENSG00000115138 ENST00000264708 N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 0.602±0.00 0.403±0.00 N/A N/A 1.071±0.00
ENST00000380794 N/A 0.125±0.00 N/A 0.025±0.00 0.698±0.00 0.391±0.00 0.281±0.00 N/A N/A 0.500±0.00 N/A 0.312±0.12 3.733±2.66 1.529±0.00
ENST00000395826 0.492±0.00 0.939±0.00 N/A 1.394±0.00 4.124±0.00 0.857±0.00 0.558±0.00 N/A N/A 0.302±0.00 0.481±0.00 N/A 5.550±3.09 3.626±3.20
ENST00000405623 0.331±0.00 0.275±0.00 N/A 0.054±0.00 0.526±0.00 N/A 0.218±0.00 N/A 0.230±0.00 N/A N/A N/A 1.508±0.41 2.062±0.00
ENST00000449220 N/A N/A N/A N/A N/A 0.805±0.00 0.321±0.00 0.347±0.00 N/A N/A N/A 0.166±0.06 N/A N/A
ENSG00000229593 ENST00000458157 0.009±0.00 N/A N/A 0.027±0.00 0.043±0.03 N/A 0.025±0.00 0.018±0.00 N/A N/A N/A N/A N/A 0.027±0.01
ENSG00000276653 ENST00000461754 N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00

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