C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00003S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167548-ENSG00000167550 CGP 9606 12:49018975-49070025
GeneTranscriptPositionBiotype
ENSG00000167548 (KMT2D)
lysine (K)-specific methyltransferase 2D
ENST00000301067 (KMT2D-001) 49018975-49055324 protein_coding
ENST00000526209 (KMT2D-002) 49021578-49024624 protein_coding
ENST00000547610 (KMT2D-007) 49054380-49059774 protein_coding
ENST00000549743 (KMT2D-005) 49035575-49037296 processed_transcript
ENST00000549799 (KMT2D-006) 49038468-49039299 processed_transcript
ENST00000550356 (KMT2D-003) 49043078-49043698 retained_intron
ENST00000552391 (KMT2D-004) 49030280-49031404 retained_intron
ENSG00000167550 (RHEBL1)
Ras homolog enriched in brain like 1
ENST00000301068 (RHEBL1-001) 49064685-49070025 protein_coding
ENST00000420065 (RHEBL1-003) 49064686-49069947 nonsense_mediated_decay
ENST00000550675 (RHEBL1-004) 49066492-49069837 protein_coding
ENST00000550797 (RHEBL1-002) 49064702-49070025 nonsense_mediated_decay
ENSG00000181929 (PRKAG1)
protein kinase, AMP-activated, gamma 1 non-catalytic subunit
ENST00000316299 (PRKAG1-002) 49002278-49018779 protein_coding
ENST00000546531 (PRKAG1-008) 49002312-49018787 nonsense_mediated_decay
ENST00000547082 (PRKAG1-009) 49005311-49018807 protein_coding
ENST00000547125 (PRKAG1-018) 49005795-49018757 protein_coding
ENST00000547306 (PRKAG1-006) 49002278-49018764 protein_coding
ENST00000548065 (PRKAG1-001) 49002281-49019197 protein_coding
ENST00000548362 (PRKAG1-016) 49002274-49003593 protein_coding
ENST00000548605 (PRKAG1-014) 49005138-49018748 protein_coding
ENST00000548857 (PRKAG1-012) 49005131-49018775 protein_coding
ENST00000548950 (PRKAG1-020) 49003772-49018750 protein_coding
ENST00000549726 (PRKAG1-004) 49003810-49018764 retained_intron
ENST00000550125 (PRKAG1-013) 49003757-49018775 retained_intron
ENST00000550448 (PRKAG1-003) 49004224-49018764 retained_intron
ENST00000551121 (PRKAG1-019) 49003880-49018743 protein_coding
ENST00000551696 (PRKAG1-021) 49002969-49018777 protein_coding
ENST00000551770 (PRKAG1-017) 49002640-49005835 protein_coding
ENST00000552212 (PRKAG1-005) 49002614-49018748 protein_coding
ENST00000552463 (PRKAG1-010) 49004572-49018415 protein_coding
ENST00000552657 (PRKAG1-011) 49012613-49018786 retained_intron
ENST00000552793 (PRKAG1-015) 49003762-49005829 retained_intron

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_00003S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048154-ENSMUSG00000023755 CGP 10090 15:98831669-98881404
GeneTranscriptPositionBiotype
ENSMUSG00000023755 (Rhebl1)
Ras homolog enriched in brain like 1
ENSMUST00000024518 (Rhebl1-001) 98877778-98881404 protein_coding
ENSMUST00000147015 (Rhebl1-002) 98878046-98881090 processed_transcript
ENSMUST00000155699 (Rhebl1-003) 98879533-98880746 retained_intron
ENSMUSG00000048154 (Kmt2d)
lysine (K)-specific methyltransferase 2D
ENSMUST00000023741 (Kmt2d-001) 98831672-98871204 protein_coding
ENSMUST00000178486 (Kmt2d-201) 98831669-98871183 protein_coding
ENSMUST00000184363 (Kmt2d-002) 98854714-98856309 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00003S_0001ENSG00000167548ENST00000301067ENST00000526209ENSG00000167550ENST00000301068ENST00000420065ENST00000550675ENST00000550797ENSG00000181929ENST00000316299ENST00000546531ENST00000547306ENST00000548065CIL_00003S_0002ENSMUSG00000023755ENSMUST00000024518ENSMUST00000147015ENSMUSG00000048154ENSMUST00000023741ENSMUST00000178486
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167548 ENST00000301067 5.611±0.00 6.739±0.00 0.662±0.00 2.415±0.93 4.015±0.00 3.010±0.00 2.475±1.55 1.731±0.53 1.841±0.47 4.068±2.66 4.821±3.73 5.385±2.24 3.873±0.60 5.540±0.86
ENST00000526209 N/A N/A N/A N/A N/A N/A N/A 5.945±0.00 N/A N/A N/A 31.300±0.00 26.097±0.00 21.010±0.00
ENST00000547610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167550 ENST00000301068 N/A N/A N/A 1.414±0.00 N/A N/A N/A N/A N/A N/A N/A 0.694±0.09 0.061±0.00 0.861±0.06
ENST00000420065 0.052±0.00 N/A N/A N/A 0.185±0.00 0.274±0.00 0.103±0.00 0.130±0.00 0.116±0.00 0.190±0.08 0.127±0.00 0.251±0.00 0.376±0.03 N/A
ENST00000550675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.765±0.00 0.297±0.00 N/A
ENST00000550797 N/A 0.720±0.00 N/A N/A 0.289±0.00 N/A N/A N/A N/A 0.335±0.00 N/A 0.455±0.00 N/A N/A
ENSG00000181929 ENST00000316299 N/A N/A N/A N/A N/A 5.858±0.00 12.338±0.00 N/A 12.258±0.00 N/A N/A N/A 14.791±0.00 14.672±0.00
ENST00000546531 N/A N/A N/A N/A N/A N/A N/A 5.868±0.00 N/A N/A N/A N/A N/A N/A
ENST00000547082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547306 22.314±0.00 23.209±0.00 N/A 9.700±0.00 22.891±0.00 12.028±0.00 12.242±4.04 17.575±0.00 N/A N/A 10.156±0.00 13.945±0.00 13.280±0.00 28.119±0.00
ENST00000548065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.977±4.26 12.384±0.00 N/A
ENST00000548362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023755 ENSMUST00000024518 1.840±0.50 0.884±0.22 2.856±0.24 5.084±2.87 2.597±0.44 0.906±0.21 1.593±0.58 2.603±0.62 0.718±0.61 2.485±0.16 1.353±0.47 3.140±1.08 4.080±2.61 1.339±0.78
ENSMUST00000147015 N/A N/A N/A 3.054±0.00 N/A N/A N/A N/A 0.258±0.17 N/A 0.369±0.00 1.506±0.63 0.915±0.27 0.486±0.14
ENSMUST00000155699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048154 ENSMUST00000023741 2.819±1.25 5.570±2.02 4.591±2.08 5.939±2.91 4.853±3.48 3.122±1.23 2.022±0.47 2.648±0.80 1.700±0.79 6.651±1.60 3.041±1.35 7.152±4.13 3.918±1.58 2.884±1.08
ENSMUST00000178486 0.950±0.14 N/A 1.184±0.00 N/A 2.808±1.51 3.032±1.47 1.138±0.00 N/A 0.735±0.00 N/A 1.052±0.59 3.071±0.95 1.625±0.67 0.459±0.00
ENSMUST00000184363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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