C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000051_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078675-ENSDARG00000078675 CGP 7955 6:32018244-32096803
GeneTranscriptPositionBiotype
ENSDARG00000044365 (angptl3)
angiopoietin-like 3 		ENSDART00000065146 (angptl3-201) 32037395-32041277 protein_coding
ENSDART00000104538 (angptl3-202) 32037389-32041214 protein_coding
ENSDART00000140004 (angptl3-001) 32036367-32041323 protein_coding
ENSDARG00000056414 (usp1)
ubiquitin specific protease 1 		ENSDART00000078908 (usp1-001) 32096841-32103897 protein_coding
ENSDART00000126242 (usp1-201) 32096959-32103362 protein_coding
ENSDART00000133162 (usp1-002) 32086672-32098011 processed_transcript
ENSDART00000151002 (usp1-003) 32101282-32103873 protein_coding
ENSDARG00000078675 (dock7)
dedicator of cytokinesis 7 		ENSDART00000042134 (dock7-001) 32018244-32096803 protein_coding
ENSDART00000065149 (dock7-003) 32030504-32049449 protein_coding
ENSDART00000130932 (dock7-004) 32028471-32029224 processed_transcript
ENSDART00000135347 (dock7-002) 32085227-32095269 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_000051_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116641-ENSG00000116641 CGP 9606 1:62454728-62688368
GeneTranscriptPositionBiotype
ENSG00000116641 (DOCK7)
dedicator of cytokinesis 7 		ENST00000251157 (DOCK7-201) 62454728-62688368 protein_coding
ENST00000340370 (DOCK7-004) 62454898-62688282 protein_coding
ENST00000404627 (DOCK7-001) 62584106-62688282 protein_coding
ENST00000454575 (DOCK7-002) 62454898-62555934 protein_coding
ENST00000464312 (DOCK7-006) 62625098-62633546 processed_transcript
ENST00000467758 (DOCK7-007) 62475212-62476189 processed_transcript
ENST00000479983 (DOCK7-003) 62492306-62495298 processed_transcript
ENST00000489185 (DOCK7-005) 62474010-62479004 processed_transcript
ENST00000614472 (DOCK7-202) 62543726-62653789 protein_coding
ENSG00000132855 (ANGPTL3)
angiopoietin-like 3 		ENST00000371129 (ANGPTL3-001) 62597487-62606159 protein_coding
ENST00000482591 (ANGPTL3-002) 62601034-62602380 processed_transcript
ENST00000493994 (ANGPTL3-003) 62602320-62604658 processed_transcript
ENSG00000213703 (RP5-849H19.2)
 ENST00000258651 (RP5-849H19.2-001) 62641122-62641667 processed_pseudogene
ENSG00000270549 (RP11-293K19.1)
 ENST00000604867 (RP11-293K19.1-001) 62530636-62530873 processed_pseudogene
ENSG00000278967 (RP5-849H19.3)
 ENST00000624477 (RP5-849H19.3-001) 62607766-62609584 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_000051_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028556-ENSMUSG00000028556 CGP 10090 4:98936665-99120915
GeneTranscriptPositionBiotype
ENSMUSG00000028553 (Angptl3)
angiopoietin-like 3 		ENSMUST00000030280 (Angptl3-001) 99030954-99038065 protein_coding
ENSMUST00000125546 (Angptl3-002) 99033203-99046111 processed_transcript
ENSMUST00000136091 (Angptl3-003) 99033179-99037959 processed_transcript
ENSMUSG00000028556 (Dock7)
dedicator of cytokinesis 7 		ENSMUST00000030286 (Dock7-001) 98936675-99120860 protein_coding
ENSMUST00000075836 (Dock7-201) 98936665-99120915 protein_coding
ENSMUST00000124040 (Dock7-011) 98944658-98954846 processed_transcript
ENSMUST00000124466 (Dock7-002) 98936857-99023390 processed_transcript
ENSMUST00000127417 (Dock7-007) 98936857-98973169 protein_coding
ENSMUST00000127946 (Dock7-005) 98991393-99008163 protein_coding
ENSMUST00000131386 (Dock7-003) 99007941-99023463 processed_transcript
ENSMUST00000139152 (Dock7-008) 98955212-98962216 processed_transcript
ENSMUST00000140225 (Dock7-009) 98944253-98945205 processed_transcript
ENSMUST00000140848 (Dock7-010) 98958988-98960314 processed_transcript
ENSMUST00000150254 (Dock7-004) 98989309-99009305 protein_coding
ENSMUST00000153362 (Dock7-006) 99003750-99008480 processed_transcript
ENSMUSG00000081733 (Gm12852)
predicted gene 12852 		ENSMUST00000119478 (Gm12852-001) 99103060-99103778 processed_pseudogene
ENSMUSG00000087395 (Gm12705)
predicted gene 12705 		ENSMUST00000129460 (Gm12705-001) 99116414-99118301 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000051_0001ENSDARG00000044365ENSDART00000065146ENSDART00000104538ENSDART00000140004ENSDARG00000056414ENSDART00000078908ENSDART00000126242ENSDART00000133162ENSDART00000151002ENSDARG00000078675ENSDART00000042134ENSDART00000065149ENSDART00000130932ENSDART00000135347CIL_000051_0002ENSG00000116641ENST00000251157ENST00000340370ENST00000404627ENST00000454575ENST00000464312ENST00000467758ENST00000479983ENST00000489185ENST00000614472ENSG00000132855ENST00000371129ENST00000482591ENST00000493994ENSG00000213703ENST00000258651ENSG00000270549ENST00000604867ENSG00000278967ENST00000624477CIL_000051_0003ENSMUSG00000028553ENSMUST00000030280ENSMUST00000125546ENSMUST00000136091ENSMUSG00000028556ENSMUST00000030286ENSMUST00000075836ENSMUST00000124040ENSMUST00000124466ENSMUST00000127417ENSMUST00000127946ENSMUST00000131386ENSMUST00000139152ENSMUST00000140225ENSMUST00000140848ENSMUST00000150254ENSMUST00000153362ENSMUSG00000081733ENSMUST00000119478ENSMUSG00000087395ENSMUST00000129460
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000051_0001ENSDARG00000044365ENSDART00000065146ENSDART00000104538ENSDART00000140004ENSDARG00000056414ENSDART00000078908ENSDARG00000078675ENSDART00000042134ENSDART00000135347CIL_000051_0002ENSG00000116641ENST00000251157ENST00000340370ENST00000404627ENST00000454575ENST00000614472ENSG00000132855ENST00000371129ENST00000482591ENST00000493994ENSG00000213703ENST00000258651ENSG00000270549ENST00000604867ENSG00000278967ENST00000624477CIL_000051_0003ENSMUSG00000028553ENSMUST00000030280ENSMUST00000125546ENSMUST00000136091ENSMUSG00000028556ENSMUST00000030286ENSMUST00000075836ENSMUST00000124466ENSMUST00000127417ENSMUST00000139152ENSMUSG00000081733ENSMUST00000119478ENSMUSG00000087395ENSMUST00000129460
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044365 ENSDART00000065146 N/A N/A N/A 1.314±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000104538 N/A N/A N/A 1.179±0.00 N/A N/A 0.154±0.00 3.239±0.00 1.051±0.00 N/A N/A N/A N/A N/A
ENSDART00000140004 N/A N/A N/A 3.619±1.93 N/A N/A 0.673±0.46 3.964±1.97 0.575±0.00 N/A 0.389±0.00 N/A N/A N/A
ENSDARG00000056414 ENSDART00000078908 N/A N/A N/A 8.266±0.64 N/A N/A 2.161±0.34 11.256±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000126242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078675 ENSDART00000042134 N/A N/A N/A 11.751±0.90 N/A N/A 5.354±0.56 6.457±3.23 0.351±0.00 N/A 1.615±0.00 N/A N/A N/A
ENSDART00000065149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135347 N/A N/A N/A 5.397±0.00 N/A N/A 5.894±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116641 ENST00000251157 N/A 0.369±0.00 N/A 0.696±0.00 1.188±0.00 1.309±0.00 N/A N/A 0.208±0.00 0.486±0.23 N/A 1.706±0.00 N/A N/A
ENST00000340370 0.737±0.00 0.443±0.00 N/A 1.112±0.00 1.369±0.08 N/A 0.292±0.00 N/A 1.176±0.75 N/A N/A 0.940±0.00 1.381±0.00 2.413±0.00
ENST00000404627 N/A N/A N/A 2.500±0.71 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454575 1.590±0.00 1.524±0.00 N/A 2.496±0.76 3.155±1.20 2.438±0.44 0.833±0.50 2.325±0.00 1.524±0.67 1.179±0.13 1.069±0.71 3.347±1.02 2.050±0.91 5.975±0.71
ENST00000464312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614472 N/A N/A N/A N/A 2.028±0.00 N/A 0.638±0.00 N/A N/A N/A 0.579±0.00 N/A N/A N/A
ENSG00000132855 ENST00000371129 N/A 0.035±0.00 2.583±0.00 0.095±0.07 0.166±0.15 0.002±0.00 0.005±0.00 38.486±35.50 54.323±0.00 0.046±0.00 0.009±0.00 0.014±0.01 0.011±0.00 0.070±0.00
ENST00000482591 N/A 0.145±0.00 N/A 0.114±0.00 N/A 1.579±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493994 0.101±0.00 0.024±0.00 N/A N/A N/A 0.693±0.64 0.332±0.00 N/A N/A N/A N/A 0.080±0.01 N/A N/A
ENSG00000213703 ENST00000258651 N/A N/A 0.125±0.00 0.905±0.00 0.841±0.00 3.422±0.00 0.145±0.12 N/A 0.156±0.10 0.999±0.00 0.026±0.00 0.508±0.61 N/A 0.271±0.00
ENSG00000270549 ENST00000604867 N/A N/A N/A N/A N/A 1.595±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000278967 ENST00000624477 0.016±0.00 0.107±0.00 2.114±0.00 0.095±0.02 0.344±0.31 0.170±0.15 0.134±0.12 1.712±1.26 0.729±0.00 0.122±0.07 0.026±0.00 0.277±0.40 0.020±0.00 0.101±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028553 ENSMUST00000030280 0.092±0.04 0.448±0.00 0.038±0.00 0.089±0.00 0.197±0.03 0.090±0.00 0.053±0.00 2.551±0.41 80.501±51.51 0.078±0.00 0.049±0.03 0.280±0.22 0.750±0.67 0.015±0.00
ENSMUST00000125546 0.063±0.03 0.064±0.03 0.085±0.00 0.199±0.14 0.091±0.07 0.037±0.00 0.047±0.01 N/A N/A 0.052±0.01 N/A 0.101±0.06 0.026±0.00 0.022±0.01
ENSMUST00000136091 0.324±0.11 0.410±0.20 N/A 0.599±0.00 0.400±0.00 N/A 0.384±0.18 3.564±0.35 77.224±9.29 0.327±0.15 N/A 0.459±0.17 0.232±0.05 N/A
ENSMUSG00000028556 ENSMUST00000030286 1.666±0.96 N/A 3.143±0.19 15.676±3.49 1.017±0.00 N/A 0.712±0.25 N/A N/A N/A 0.393±0.06 5.589±2.54 2.729±0.00 1.475±0.07
ENSMUST00000075836 5.255±3.04 5.564±0.87 3.471±0.12 3.270±0.00 2.797±1.47 4.005±0.66 0.570±0.00 2.267±1.01 1.608±1.09 6.563±1.93 0.314±0.12 5.924±3.21 4.747±2.12 2.393±0.13
ENSMUST00000124040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124466 1.386±0.00 2.620±0.36 N/A N/A 2.292±0.20 N/A 0.761±0.24 N/A 1.429±0.69 N/A 0.300±0.07 5.887±0.24 2.688±0.63 1.014±0.00
ENSMUST00000127417 N/A N/A 7.481±1.81 10.556±4.21 N/A N/A N/A N/A 1.793±0.37 N/A 0.810±0.17 10.541±0.00 6.209±2.04 2.664±0.00
ENSMUST00000127946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139152 N/A N/A N/A N/A N/A 9.487±0.00 3.195±0.00 7.647±0.20 2.160±0.00 13.319±0.00 N/A 19.724±0.00 N/A 10.005±0.93
ENSMUST00000140225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081733 ENSMUST00000119478 0.066±0.01 N/A 0.050±0.00 0.445±0.00 0.134±0.00 0.185±0.06 0.054±0.00 N/A 0.053±0.03 0.107±0.00 N/A 0.163±0.15 0.124±0.01 0.074±0.02
ENSMUSG00000087395 ENSMUST00000129460 0.210±0.05 N/A 0.087±0.00 0.209±0.11 0.196±0.03 N/A 0.043±0.00 0.128±0.03 0.041±0.02 0.164±0.10 0.053±0.01 0.221±0.05 0.100±0.00 0.085±0.03

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