C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00005P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076499-ENSDARG00000037266 CGP 7955 1:24711569-24794079
GeneTranscriptPositionBiotype
ENSDARG00000076499 (usp53b)
ubiquitin specific peptidase 53b 		ENSDART00000109714 (usp53b-201) 24711569-24768692 protein_coding
ENSDART00000145012 (usp53b-001) 24743837-24768692 protein_coding
CIL_00005P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078615-ENSDARG00000012311 CGP 7955 7:72489000-72561522
GeneTranscriptPositionBiotype
ENSDARG00000012311 (myoz2a)
myozenin 2a 		ENSDART00000049928 (myoz2a-201) 72545897-72561522 protein_coding
ENSDART00000124764 (myoz2a-202) 72545914-72561522 protein_coding
ENSDARG00000078615 (USP53 (2 of 2))
ubiquitin specific peptidase 53 		ENSDART00000112621 (USP53 (2 of 2)-201) 72489000-72511552 protein_coding
CIL_00005P_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039701-ENSMUSG00000028116 CGP 10090 3:122933601-123034990
GeneTranscriptPositionBiotype
ENSMUSG00000028116 (Myoz2)
myozenin 2 		ENSMUST00000029761 (Myoz2-001) 123006206-123034990 protein_coding
ENSMUST00000140231 (Myoz2-002) 123024043-123034951 retained_intron
ENSMUST00000141588 (Myoz2-004) 123013599-123034844 nonsense_mediated_decay
ENSMUST00000143464 (Myoz2-003) 123013599-123034969 processed_transcript
ENSMUSG00000039701 (Usp53)
ubiquitin specific peptidase 53 		ENSMUST00000090379 (Usp53-201) 122933601-122984447 protein_coding
ENSMUSG00000076949 (Gm22066)
predicted gene, 22066 		ENSMUST00000103761 (Gm22066-201) 123015259-123015368 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00005P_0001ENSDARG00000076499ENSDART00000109714ENSDART00000145012CIL_00005P_0002ENSDARG00000012311ENSDART00000049928ENSDART00000124764ENSDARG00000078615ENSDART00000112621CIL_00005P_0003ENSMUSG00000028116ENSMUST00000029761ENSMUST00000140231ENSMUST00000141588ENSMUST00000143464ENSMUSG00000039701ENSMUST00000090379ENSMUSG00000076949ENSMUST00000103761
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00005P_0001ENSDARG00000076499ENSDART00000109714CIL_00005P_0002ENSDARG00000012311ENSDART00000049928ENSDART00000124764ENSDARG00000078615ENSDART00000112621CIL_00005P_0003ENSMUSG00000028116ENSMUST00000029761ENSMUST00000140231ENSMUST00000141588ENSMUST00000143464ENSMUSG00000039701ENSMUST00000090379ENSMUSG00000076949ENSMUST00000103761
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076499 ENSDART00000109714 N/A N/A N/A 5.803±3.21 N/A N/A 0.735±0.28 0.391±0.00 N/A N/A 1.150±0.00 N/A N/A N/A
ENSDART00000145012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012311 ENSDART00000049928 N/A N/A N/A 0.082±0.00 N/A N/A 6.981±0.00 4.371±0.00 0.019±0.00 N/A N/A N/A N/A N/A
ENSDART00000124764 N/A N/A N/A 0.101±0.04 N/A N/A 19.367±11.55 2.542±0.79 0.019±0.00 N/A 69.851±0.00 N/A N/A N/A
ENSDARG00000078615 ENSDART00000112621 N/A N/A N/A 2.147±0.00 N/A N/A 3.077±1.91 N/A 0.376±0.00 N/A 1.928±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028116 ENSMUST00000029761 0.033±0.00 N/A 0.035±0.01 0.045±0.02 3.038±0.57 N/A 299.909±13.32 1.242±0.70 0.203±0.29 3.658±1.13 82.484±38.74 0.112±0.05 0.274±0.32 0.416±0.13
ENSMUST00000140231 0.055±0.00 N/A 0.003±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00
ENSMUST00000141588 0.046±0.00 N/A N/A 0.027±0.00 N/A 0.194±0.08 N/A N/A N/A 1.647±0.00 N/A N/A N/A 0.165±0.00
ENSMUST00000143464 0.012±0.00 N/A N/A N/A 1.319±0.00 0.257±0.13 67.213±1.76 0.508±0.00 N/A 1.301±0.18 N/A N/A 0.132±0.06 N/A
ENSMUSG00000039701 ENSMUST00000090379 0.917±0.29 1.659±0.31 1.756±0.64 1.275±0.91 1.874±0.74 6.456±1.65 1.139±0.08 1.750±0.35 0.492±0.23 1.772±0.61 0.396±0.06 3.224±2.39 3.140±1.45 2.505±1.08
ENSMUSG00000076949 ENSMUST00000103761 N/A N/A N/A 0.886±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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