C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00008A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040261-ENSDARG00000075993 CGP 7955 17:5094172-5325595
GeneTranscriptPositionBiotype
ENSDARG00000002776 (supt3h)
suppressor of Ty 3 homolog (S. cerevisiae) 		ENSDART00000026904 (supt3h-201) 4951306-4998460 protein_coding
ENSDART00000141251 (supt3h-002) 4963581-5095174 protein_coding
ENSDART00000141598 (supt3h-001) 4963581-5166425 protein_coding
ENSDART00000143104 (supt3h-003) 4985590-5038811 processed_transcript
ENSDARG00000075993 (clic5a)
chloride intracellular channel 5a 		ENSDART00000035944 (clic5a-001) 5308388-5325595 protein_coding
CIL_00008A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059233-ENSDARG00000077625 CGP 7955 20:44022921-44194973
GeneTranscriptPositionBiotype
ENSDARG00000077625 (clic5b)
chloride intracellular channel 5b 		ENSDART00000001136 (clic5b-201) 44155093-44175444 protein_coding
ENSDART00000108654 (clic5b-202) 44155093-44194973 protein_coding
CIL_00008A_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124813-ENSG00000112782 CGP 9606 6:45328157-46080395
GeneTranscriptPositionBiotype
ENSG00000112782 (CLIC5)
chloride intracellular channel 5 		ENST00000185206 (CLIC5-002) 45898451-46080395 protein_coding
ENST00000339561 (CLIC5-003) 45901761-46015849 protein_coding
ENST00000464137 (CLIC5-007) 46014283-46015546 processed_transcript
ENST00000476852 (CLIC5-006) 45932694-45937464 processed_transcript
ENST00000484572 (CLIC5-004) 45903066-45920714 processed_transcript
ENST00000486570 (CLIC5-005) 45914245-45937597 processed_transcript
ENST00000487396 (CLIC5-001) 45900308-45903179 processed_transcript
ENST00000544153 (CLIC5-201) 45911624-46015889 protein_coding
ENSG00000124813 (RUNX2)
runt-related transcription factor 2 		ENST00000359524 (RUNX2-001) 45422485-45551079 protein_coding
ENST00000371432 (RUNX2-201) 45328317-45551082 protein_coding
ENST00000371436 (RUNX2-004) 45328727-45547393 protein_coding
ENST00000371438 (RUNX2-003) 45328369-45551079 protein_coding
ENST00000465038 (RUNX2-002) 45328323-45547305 protein_coding
ENST00000473041 (RUNX2-006) 45361573-45372055 processed_transcript
ENST00000478660 (RUNX2-009) 45422036-45663872 nonsense_mediated_decay
ENST00000483243 (RUNX2-005) 45328323-45372055 processed_transcript
ENST00000483377 (RUNX2-007) 45328157-45547209 nonsense_mediated_decay
ENST00000576263 (RUNX2-008) 45328727-45664349 protein_coding
ENSG00000196284 (SUPT3H)
suppressor of Ty 3 homolog (S. cerevisiae) 		ENST00000306867 (SUPT3H-201) 44826730-45106015 protein_coding
ENST00000371458 (SUPT3H-004) 44829767-44955510 protein_coding
ENST00000371459 (SUPT3H-006) 44828845-45377933 protein_coding
ENST00000371460 (SUPT3H-005) 44828732-45377933 protein_coding
ENST00000459689 (SUPT3H-003) 45250955-45377423 processed_transcript
ENST00000475057 (SUPT3H-001) 44809317-45377953 nonsense_mediated_decay
ENSG00000261080 (RP1-166H4.2)
 ENST00000563807 (RP1-166H4.2-001) 45573346-45576770 lincRNA
ENSG00000271857 (RP1-244F24.1)
 ENST00000606796 (RP1-244F24.1-001) 45421079-45422005 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008A_0001ENSDARG00000002776ENSDART00000026904ENSDART00000141251ENSDART00000141598ENSDART00000143104ENSDARG00000075993ENSDART00000035944CIL_00008A_0002ENSDARG00000077625ENSDART00000001136ENSDART00000108654CIL_00008A_0003ENSG00000112782ENST00000185206ENST00000339561ENST00000464137ENST00000476852ENST00000484572ENST00000486570ENST00000487396ENST00000544153ENSG00000124813ENST00000359524ENST00000371432ENST00000371436ENST00000371438ENST00000465038ENST00000473041ENST00000478660ENST00000483243ENST00000483377ENST00000576263ENSG00000196284ENST00000306867ENST00000371458ENST00000371459ENST00000371460ENST00000459689ENST00000475057ENSG00000261080ENST00000563807ENSG00000271857ENST00000606796
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008A_0001ENSDARG00000002776ENSDART00000026904ENSDART00000141598ENSDARG00000075993ENSDART00000035944CIL_00008A_0002ENSDARG00000077625ENSDART00000001136ENSDART00000108654CIL_00008A_0003ENSG00000112782ENST00000185206ENST00000339561ENST00000484572ENST00000544153ENSG00000124813ENST00000359524ENST00000371432ENST00000371436ENST00000371438ENST00000465038ENST00000478660ENST00000483243ENST00000576263ENSG00000196284ENST00000306867ENST00000371458ENST00000371459ENST00000371460ENST00000475057ENSG00000261080ENST00000563807ENSG00000271857ENST00000606796
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002776 ENSDART00000026904 N/A N/A N/A 4.195±0.00 N/A N/A 5.628±0.00 3.016±0.00 1.126±0.00 N/A N/A N/A N/A N/A
ENSDART00000141251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141598 N/A N/A N/A 1.958±0.41 N/A N/A 4.552±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075993 ENSDART00000035944 N/A N/A N/A 0.164±0.08 N/A N/A 7.830±3.08 2.333±0.67 N/A N/A 54.975±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000077625 ENSDART00000001136 N/A N/A N/A 0.625±0.13 N/A N/A 0.264±0.20 2.701±0.00 1.267±0.00 N/A 0.138±0.00 N/A N/A N/A
ENSDART00000108654 N/A N/A N/A N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112782 ENST00000185206 N/A N/A N/A 0.113±0.00 0.966±0.00 N/A N/A N/A 0.028±0.00 N/A N/A 0.157±0.00 N/A 0.360±0.00
ENST00000339561 N/A N/A N/A N/A N/A 1.602±0.00 4.899±0.00 0.027±0.00 0.627±0.00 N/A N/A 0.887±0.00 N/A N/A
ENST00000464137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484572 N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A 1.627±0.00
ENST00000486570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.514±0.00 N/A
ENSG00000124813 ENST00000359524 0.458±0.00 0.436±0.00 N/A 0.348±0.00 0.515±0.00 0.495±0.00 N/A 0.376±0.27 0.159±0.00 0.692±0.09 N/A 0.299±0.10 0.152±0.05 N/A
ENST00000371432 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 N/A 0.807±0.55 0.131±0.00 0.215±0.12
ENST00000371436 N/A N/A 0.222±0.00 0.486±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371438 N/A N/A N/A N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A 0.244±0.00 N/A N/A
ENST00000465038 N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A 0.571±0.00
ENST00000473041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478660 N/A N/A N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A 0.393±0.00
ENST00000483243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.928±0.00
ENST00000483377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.00 N/A N/A N/A
ENSG00000196284 ENST00000306867 N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A 0.070±0.00 N/A N/A 0.558±0.00 N/A N/A
ENST00000371458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A
ENST00000371459 N/A 0.362±0.00 N/A 0.402±0.00 0.388±0.10 0.700±0.24 0.119±0.00 0.779±0.00 0.089±0.00 0.506±0.17 N/A 0.783±0.29 1.183±0.40 2.609±0.31
ENST00000371460 0.160±0.00 N/A 0.878±0.00 N/A N/A N/A 0.067±0.00 N/A 0.631±0.00 N/A N/A 0.579±0.00 0.512±0.00 N/A
ENST00000459689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475057 1.766±0.00 0.873±0.00 0.410±0.00 4.624±3.40 1.742±0.24 3.794±0.00 0.214±0.02 2.325±0.00 0.660±0.43 1.050±0.07 0.860±0.00 2.129±2.37 1.349±0.18 5.050±0.00
ENSG00000261080 ENST00000563807 0.055±0.00 0.280±0.00 N/A 0.080±0.00 0.112±0.00 0.096±0.00 0.061±0.00 0.056±0.00 0.114±0.00 0.125±0.00 0.008±0.00 0.052±0.02 0.024±0.00 N/A
ENSG00000271857 ENST00000606796 N/A 0.034±0.00 0.139±0.00 0.159±0.03 0.017±0.00 0.177±0.07 0.016±0.00 0.050±0.00 0.015±0.00 0.344±0.00 0.320±0.00 0.259±0.10 0.058±0.00 0.064±0.00

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