C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00008J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197540-ENSG00000172270 CGP 9606 19:544034-583493
GeneTranscriptPositionBiotype
ENSG00000197540 (GZMM)
granzyme M (lymphocyte met-ase 1) 		ENST00000264553 (GZMM-001) 544035-549924 protein_coding
ENST00000592501 (GZMM-002) 544034-549924 protein_coding
CIL_00008J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054206-ENSMUSG00000023175 CGP 10090 10:79689020-79711969
GeneTranscriptPositionBiotype
ENSMUSG00000023175 (Bsg)
basigin 		ENSMUST00000067036 (Bsg-001) 79704500-79711895 protein_coding
ENSMUST00000105381 (Bsg-006) 79709598-79711969 protein_coding
ENSMUST00000178383 (Bsg-005) 79704570-79711823 protein_coding
ENSMUST00000179201 (Bsg-004) 79704508-79710728 processed_transcript
ENSMUST00000179781 (Bsg-002) 79704491-79711969 protein_coding
ENSMUST00000180235 (Bsg-003) 79710105-79711710 retained_intron
ENSMUSG00000054206 (Gzmm)
granzyme M (lymphocyte met-ase 1) 		ENSMUST00000020549 (Gzmm-001) 79689020-79695261 protein_coding
ENSMUST00000151213 (Gzmm-002) 79693758-79695260 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008J_0001ENSG00000197540ENST00000264553ENST00000592501CIL_00008J_0002ENSMUSG00000023175ENSMUST00000067036ENSMUST00000105381ENSMUST00000178383ENSMUST00000179201ENSMUST00000179781ENSMUST00000180235ENSMUSG00000054206ENSMUST00000020549ENSMUST00000151213
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008J_0001ENSG00000197540ENST00000264553ENST00000592501CIL_00008J_0002ENSMUSG00000023175ENSMUST00000067036ENSMUST00000105381ENSMUST00000178383ENSMUST00000179201ENSMUST00000179781ENSMUSG00000054206ENSMUST00000020549ENSMUST00000151213
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000197540 ENST00000264553 0.039±0.00 11.612±0.00 N/A 0.107±0.00 0.711±0.56 0.044±0.00 0.036±0.00 0.041±0.02 0.098±0.00 4.029±3.22 0.053±0.00 0.963±0.66 0.457±0.40 0.206±0.14
ENST00000592501 0.180±0.00 N/A N/A 0.108±0.00 N/A 0.078±0.00 0.204±0.00 0.206±0.05 0.558±0.00 N/A 0.053±0.00 0.070±0.00 1.373±1.32 0.068±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023175 ENSMUST00000067036 N/A 27.115±6.74 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105381 N/A N/A N/A N/A 27.648±0.00 N/A N/A N/A N/A N/A N/A 246.717±25.67 N/A N/A
ENSMUST00000178383 N/A N/A N/A 293.634±0.00 N/A N/A N/A N/A N/A N/A N/A 299.593±0.00 993.451±336.76 173.777±0.00
ENSMUST00000179201 184.027±40.89 209.272±82.87 N/A 101.498±3.39 174.059±34.42 287.568±64.06 263.923±42.89 221.277±0.00 227.405±0.00 204.644±31.38 N/A 279.363±143.16 566.111±0.00 57.835±0.00
ENSMUST00000179781 247.932±33.03 140.498±29.63 274.396±17.09 165.726±81.03 188.648±46.95 544.507±46.18 545.545±72.00 390.905±32.36 419.187±106.68 289.047±15.91 297.828±13.23 309.638±121.86 521.326±287.08 353.952±162.32
ENSMUST00000180235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054206 ENSMUST00000020549 0.359±0.12 0.288±0.11 0.600±0.08 0.477±0.21 0.555±0.20 0.238±0.06 1.548±0.24 0.332±0.14 0.145±0.08 0.611±0.30 3.600±0.52 0.300±0.12 1.108±0.84 0.267±0.01
ENSMUST00000151213 0.188±0.00 0.179±0.12 N/A N/A N/A 0.267±0.12 1.677±0.25 N/A N/A N/A N/A 0.293±0.13 3.479±2.69 N/A

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