C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00008K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058601-ENSDARG00000045378 CGP 7955 24:14617909-14714767
GeneTranscriptPositionBiotype
ENSDARG00000045378 (pi15a)
peptidase inhibitor 15a 		ENSDART00000012597 (pi15a-201) 14707860-14714555 protein_coding
ENSDART00000141620 (pi15a-001) 14705977-14714767 protein_coding
ENSDARG00000058601 (gdap1)
ganglioside-induced differentiation-associated protein 1 		ENSDART00000134475 (gdap1-001) 14617909-14629896 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00008K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104381-ENSG00000137558 CGP 9606 8:74321130-74855029
GeneTranscriptPositionBiotype
ENSG00000104369 (JPH1)
junctophilin 1 		ENST00000342232 (JPH1-001) 74234700-74321328 protein_coding
ENST00000518195 (JPH1-004) 74236803-74244788 processed_transcript
ENST00000519947 (JPH1-003) 74237233-74321327 nonsense_mediated_decay
ENSG00000104381 (GDAP1)
ganglioside induced differentiation associated protein 1 		ENST00000220822 (GDAP1-001) 74350382-74366876 protein_coding
ENST00000434412 (GDAP1-002) 74350418-74364604 protein_coding
ENST00000520797 (GDAP1-008) 74321514-74364260 processed_transcript
ENST00000521096 (GDAP1-007) 74321130-74364290 processed_transcript
ENST00000522568 (GDAP1-003) 74350444-74364741 nonsense_mediated_decay
ENST00000523640 (GDAP1-006) 74350434-74360248 processed_transcript
ENST00000524195 (GDAP1-005) 74362951-74488872 processed_transcript
ENST00000524366 (GDAP1-004) 74350444-74364029 processed_transcript
ENSG00000137558 (PI15)
peptidase inhibitor 15 		ENST00000260113 (PI15-002) 74824537-74855029 protein_coding
ENST00000523773 (PI15-001) 74824786-74849425 protein_coding
ENSG00000207417 (Y_RNA)
Y RNA 		ENST00000384686 (Y_RNA.1-761) 74376687-74376793 misc_RNA
ENSG00000253341 (RP11-730G20.2)
 ENST00000517662 (RP11-730G20.2-001) 74603244-74604244 processed_pseudogene
ENSG00000253596 (CTD-2320G14.2)
 ENST00000521872 (CTD-2320G14.2-001) 74347757-74350050 antisense
ENSG00000253706 (RP11-758M4.4)
 ENST00000518128 (RP11-758M4.4-001) 74816051-74866939 antisense
ENST00000522914 (RP11-758M4.4-003) 74844848-74866936 antisense
ENST00000523860 (RP11-758M4.4-002) 74798784-74866925 antisense
ENSG00000253777 (RP11-758M4.3)
 ENST00000523157 (RP11-758M4.3-001) 74804287-74804811 processed_pseudogene
ENSG00000254080 (RP11-730G20.1)
 ENST00000522127 (RP11-730G20.1-001) 74609698-74633320 antisense
ENSG00000254349 (FLJ39080)
uncharacterized LOC441355 		ENST00000518190 (FLJ39080-004) 74599775-74703679 lincRNA
ENST00000521762 (FLJ39080-002) 74702340-74768483 lincRNA
ENST00000523118 (FLJ39080-001) 74599866-74758352 lincRNA
ENST00000523442 (FLJ39080-003) 74599781-74823313 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00008K_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025777-ENSMUSG00000067780 CGP 10090 1:17145362-17630939
GeneTranscriptPositionBiotype
ENSMUSG00000025777 (Gdap1)
ganglioside-induced differentiation-associated-protein 1 		ENSMUST00000026879 (Gdap1-001) 17145362-17164271 protein_coding
ENSMUST00000150457 (Gdap1-002) 17145404-17158744 retained_intron
ENSMUST00000189465 (Gdap1-004) 17158370-17162049 retained_intron
ENSMUST00000189736 (Gdap1-003) 17145468-17161631 nonsense_mediated_decay
ENSMUSG00000067780 (Pi15)
peptidase inhibitor 15 		ENSMUST00000088476 (Pi15-001) 17601901-17630939 protein_coding
ENSMUSG00000099899 (RP24-317E22.1)
predicted gene 28784 		ENSMUST00000187817 (RP24-317E22.1-001) 17168403-17173103 lincRNA
ENSMUSG00000100053 (RP23-329F7.2)
predicted gene 28154 		ENSMUST00000186267 (RP23-329F7.2-001) 17615084-17641081 antisense
ENSMUSG00000100398 (RP23-215C21.1)
predicted gene 5251 		ENSMUST00000188959 (RP23-215C21.1-001) 17394958-17395429 processed_pseudogene
ENSMUSG00000101589 (RP23-215C21.2)
RNA binding motif protein 6, pseudogene 1 		ENSMUST00000186192 (RP23-215C21.2-001) 17397412-17400281 processed_pseudogene
ENSMUSG00000102048 (RP23-215C21.3)
predicted gene 6075 		ENSMUST00000186816 (RP23-215C21.3-001) 17429043-17429528 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008K_0001ENSDARG00000045378ENSDART00000012597ENSDART00000141620ENSDARG00000058601ENSDART00000134475CIL_00008K_0002ENSG00000104369ENST00000342232ENST00000518195ENST00000519947ENSG00000104381ENST00000220822ENST00000434412ENST00000520797ENST00000521096ENST00000522568ENST00000523640ENST00000524195ENST00000524366ENSG00000137558ENST00000260113ENST00000523773ENSG00000207417ENST00000384686ENSG00000253341ENST00000517662ENSG00000253596ENST00000521872ENSG00000253706ENST00000518128ENST00000522914ENST00000523860ENSG00000253777ENST00000523157ENSG00000254080ENST00000522127ENSG00000254349ENST00000518190ENST00000521762ENST00000523118ENST00000523442CIL_00008K_0003ENSMUSG00000025777ENSMUST00000026879ENSMUST00000150457ENSMUST00000189465ENSMUST00000189736ENSMUSG00000067780ENSMUST00000088476ENSMUSG00000099899ENSMUST00000187817ENSMUSG00000100053ENSMUST00000186267ENSMUSG00000100398ENSMUST00000188959ENSMUSG00000101589ENSMUST00000186192ENSMUSG00000102048ENSMUST00000186816
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008K_0001ENSDARG00000045378ENSDART00000012597ENSDART00000141620ENSDARG00000058601ENSDART00000134475CIL_00008K_0002ENSG00000104369ENST00000342232ENST00000519947ENSG00000104381ENST00000220822ENST00000434412ENST00000521096ENSG00000137558ENST00000260113ENST00000523773ENSG00000207417ENST00000384686ENSG00000253341ENST00000517662ENSG00000253596ENST00000521872ENSG00000253706ENST00000518128ENST00000522914ENST00000523860ENSG00000253777ENST00000523157ENSG00000254080ENST00000522127ENSG00000254349ENST00000518190ENST00000521762ENST00000523118ENST00000523442CIL_00008K_0003ENSMUSG00000025777ENSMUST00000026879ENSMUST00000150457ENSMUST00000189465ENSMUST00000189736ENSMUSG00000067780ENSMUST00000088476ENSMUSG00000099899ENSMUST00000187817ENSMUSG00000100053ENSMUST00000186267ENSMUSG00000100398ENSMUST00000188959ENSMUSG00000101589ENSMUST00000186192ENSMUSG00000102048ENSMUST00000186816
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045378 ENSDART00000012597 N/A N/A N/A 0.094±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141620 N/A N/A N/A 0.068±0.00 N/A N/A 0.168±0.00 1.083±0.00 0.046±0.00 N/A N/A N/A N/A N/A
ENSDARG00000058601 ENSDART00000134475 N/A N/A N/A 23.906±11.90 N/A N/A 2.011±0.68 2.144±0.79 N/A N/A 2.342±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104369 ENST00000342232 N/A 0.237±0.00 0.183±0.00 3.672±0.00 2.522±0.00 0.409±0.00 2.682±0.00 0.585±0.00 0.397±0.00 0.528±0.08 20.971±7.06 1.554±0.00 0.329±0.00 0.720±0.07
ENST00000518195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519947 N/A N/A N/A N/A N/A N/A 3.922±0.00 N/A N/A N/A 24.760±13.21 N/A N/A N/A
ENSG00000104381 ENST00000220822 0.223±0.00 N/A 0.895±0.00 17.060±0.78 N/A N/A 0.212±0.00 0.429±0.00 N/A 1.206±0.00 N/A 1.180±0.61 N/A 1.203±0.00
ENST00000434412 N/A N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A
ENST00000520797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.557±0.00 0.472±0.00 2.765±0.00
ENST00000522568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137558 ENST00000260113 0.703±0.00 1.027±0.00 N/A 0.246±0.00 1.961±0.99 2.056±0.19 0.041±0.02 0.118±0.10 1.255±1.25 0.707±0.41 0.005±0.00 1.006±0.62 0.061±0.01 0.442±0.42
ENST00000523773 N/A N/A 0.227±0.00 N/A N/A 2.367±0.00 0.063±0.00 N/A 0.028±0.00 N/A 0.079±0.00 N/A N/A N/A
ENSG00000207417 ENST00000384686 N/A N/A N/A N/A 30.628±0.00 N/A N/A N/A 164.561±0.00 257.943±0.00 N/A N/A N/A N/A
ENSG00000253341 ENST00000517662 0.109±0.00 0.082±0.00 0.136±0.00 0.170±0.03 0.288±0.00 0.093±0.00 0.060±0.00 0.068±0.00 0.088±0.00 0.095±0.00 0.085±0.00 0.056±0.04 0.123±0.04 0.123±0.02
ENSG00000253596 ENST00000521872 N/A N/A N/A 0.475±0.33 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00
ENSG00000253706 ENST00000518128 N/A N/A N/A 0.147±0.00 N/A 0.005±0.00 N/A N/A N/A N/A N/A 0.009±0.00 0.163±0.06 0.020±0.00
ENST00000522914 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 0.660±0.00 N/A N/A 0.081±0.00 N/A N/A
ENST00000523860 0.019±0.00 0.445±0.00 N/A 0.182±0.00 0.096±0.00 0.239±0.00 N/A 0.040±0.00 0.017±0.00 0.175±0.00 0.069±0.00 0.103±0.00 0.583±0.32 0.313±0.00
ENSG00000253777 ENST00000523157 N/A N/A N/A 0.254±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254080 ENST00000522127 0.088±0.00 0.125±0.00 N/A 0.014±0.00 N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A 0.047±0.00 0.322±0.00
ENSG00000254349 ENST00000518190 0.122±0.00 0.065±0.00 N/A 0.102±0.00 N/A N/A 0.116±0.00 0.098±0.00 N/A N/A 0.169±0.00 0.107±0.00 0.120±0.00 0.102±0.00
ENST00000521762 0.045±0.00 N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.075±0.02 N/A
ENST00000523118 N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A 0.037±0.00
ENST00000523442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025777 ENSMUST00000026879 0.051±0.00 0.310±0.15 0.126±0.03 14.089±3.65 0.170±0.06 0.255±0.15 0.032±0.02 0.040±0.01 0.010±0.01 0.024±0.01 1.885±0.59 0.236±0.05 0.023±0.01 0.318±0.08
ENSMUST00000150457 N/A 0.330±0.14 N/A N/A 0.068±0.00 0.158±0.09 N/A 0.031±0.00 N/A N/A N/A 0.171±0.00 N/A 0.245±0.15
ENSMUST00000189465 0.011±0.00 0.133±0.08 0.022±0.00 N/A 0.037±0.01 0.048±0.00 0.017±0.00 0.013±0.00 0.005±0.00 0.036±0.00 N/A N/A 0.006±0.00 0.304±0.00
ENSMUST00000189736 0.040±0.00 0.208±0.04 N/A 56.847±0.00 N/A N/A N/A 0.043±0.02 N/A N/A N/A 0.395±0.34 0.130±0.00 2.503±0.00
ENSMUSG00000067780 ENSMUST00000088476 3.435±2.23 0.387±0.17 2.532±0.35 0.094±0.04 2.051±0.34 0.337±0.08 0.897±0.04 0.761±0.20 0.098±0.03 2.431±0.23 0.135±0.05 3.950±1.90 0.431±0.82 0.139±0.07
ENSMUSG00000099899 ENSMUST00000187817 N/A N/A N/A 0.105±0.01 N/A N/A N/A N/A N/A N/A 0.036±0.01 0.050±0.03 N/A 0.166±0.06
ENSMUSG00000100053 ENSMUST00000186267 N/A N/A N/A 0.088±0.04 N/A N/A N/A N/A 0.016±0.00 N/A 0.041±0.00 N/A 0.005±0.00 0.038±0.00
ENSMUSG00000100398 ENSMUST00000188959 N/A N/A N/A 0.325±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.17
ENSMUSG00000101589 ENSMUST00000186192 0.034±0.00 N/A 0.022±0.00 0.015±0.00 N/A 0.087±0.00 N/A 0.033±0.03 0.006±0.00 0.029±0.00 0.011±0.00 0.073±0.05 0.009±0.00 0.316±0.42
ENSMUSG00000102048 ENSMUST00000186816 0.099±0.00 N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A

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