Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000A9_0001 (Click to Hide/Show)

Source ID		Type	Tax ID	Position
ENSG00000141524-ENSG00000167895		CGP	9606	17:78110458-78142968
Gene		Transcript	Position	Biotype
ENSG00000167895 (TMC8) transmembrane channel-like 8		ENST00000318430 (TMC8-002)	78130786-78142968	protein_coding
		ENST00000589691 (TMC8-003)	78130788-78142967	protein_coding
		ENST00000590184 (TMC8-013)	78134949-78138071	processed_transcript
		ENST00000590426 (TMC8-012)	78130770-78131595	protein_coding
		ENST00000590799 (TMC8-006)	78130778-78132465	protein_coding
		ENST00000591003 (TMC8-009)	78137654-78138167	processed_transcript
		ENST00000591144 (TMC8-014)	78138363-78141229	processed_transcript
		ENST00000591983 (TMC8-008)	78134868-78138071	retained_intron
		ENST00000592399 (TMC8-007)	78134868-78137047	processed_transcript

Genome

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Genes

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Transcripts

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CIL_0000A9_0002 (Click to Hide/Show)

Source ID		Type	Tax ID	Position
ENSMUSG00000025572-ENSMUSG00000050106		CGP	10090	11:117765988-117793110
Gene		Transcript	Position	Biotype
ENSMUSG00000025572 (Tmc6) transmembrane channel-like gene family 6		ENSMUST00000026659 (Tmc6-001)	117765988-117780639	protein_coding
		ENSMUST00000103025 (Tmc6-002)	117775357-117780621	protein_coding
		ENSMUST00000127227 (Tmc6-007)	117779192-117780658	protein_coding
		ENSMUST00000131606 (Tmc6-003)	117765988-117779648	nonsense_mediated_decay
		ENSMUST00000136729 (Tmc6-005)	117778742-117780944	protein_coding
		ENSMUST00000143406 (Tmc6-006)	117775717-117779650	protein_coding
		ENSMUST00000148220 (Tmc6-009)	117766060-117769073	retained_intron
		ENSMUST00000149589 (Tmc6-008)	117770078-117773043	nonsense_mediated_decay
		ENSMUST00000152304 (Tmc6-004)	117778938-117782198	protein_coding
ENSMUSG00000050106 (Tmc8) transmembrane channel-like gene family 8		ENSMUST00000050874 (Tmc8-001)	117782297-117793028	protein_coding
		ENSMUST00000106334 (Tmc8-004)	117782315-117793110	protein_coding
		ENSMUST00000117781 (Tmc8-005)	117782385-117792883	protein_coding
		ENSMUST00000119455 (Tmc8-006)	117782658-117793083	protein_coding
		ENSMUST00000127080 (Tmc8-002)	117782076-117784150	protein_coding
		ENSMUST00000156458 (Tmc8-003)	117791188-117792613	retained_intron

Genome

Exciting message

Genes

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Transcripts

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Expression Patterns

Heat Map (Expressed Only)

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000167895

ENST00000318430

N/A

40.259±0.00

N/A

N/A

1.773±0.00

N/A

N/A

N/A

N/A

4.811±1.58

N/A

N/A

3.758±0.74

N/A

ENST00000589691

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

5.733±0.00

N/A

5.194±0.00

N/A

N/A

ENST00000590184

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENST00000590426

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENST00000590799

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENST00000591003

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENST00000591144

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENST00000591983

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENST00000592399

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000025572

ENSMUST00000026659

15.693±5.11

18.279±5.81

21.899±2.59

1.025±0.04

20.376±9.44

46.375±2.36

3.716±1.27

13.044±2.01

14.523±13.15

26.545±3.05

0.875±0.41

15.658±4.97

5.136±1.27

2.466±1.15

ENSMUST00000103025

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSMUST00000127227

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSMUST00000131606

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSMUST00000136729

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSMUST00000143406

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSMUST00000148220

N/A

N/A

N/A

2.897±0.00

N/A

N/A

N/A

N/A

N/A

N/A

1.571±0.00

20.216±0.00

13.654±0.00

1.615±0.00

ENSMUST00000149589

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSMUST00000152304

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSMUSG00000050106

ENSMUST00000050874

4.057±0.00

2.378±0.00

N/A

0.467±0.06

6.541±0.26

N/A

0.874±0.13

N/A

10.891±5.55

N/A

N/A

N/A

N/A

0.634±0.00

ENSMUST00000106334

1.913±0.00

N/A

N/A

N/A

11.050±2.21

8.170±0.86

1.188±0.41

N/A

9.018±4.05

N/A

0.521±0.16

N/A

2.041±0.20

0.623±0.00

ENSMUST00000117781

N/A

N/A

N/A

N/A

2.207±0.00

N/A

2.338±0.00

N/A

0.950±0.14

N/A

N/A

N/A

N/A

N/A

ENSMUST00000119455

N/A

N/A

N/A

N/A

N/A

9.121±0.00

N/A

N/A

N/A

N/A

0.268±0.00

3.192±0.00

3.671±0.32

N/A

ENSMUST00000127080

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSMUST00000156458

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

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