C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000AJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017441-ENSDARG00000013741 CGP 7955 1:6504059-6541073
GeneTranscriptPositionBiotype
ENSDARG00000013741 (lancl1)
LanC antibiotic synthetase component C-like 1 (bacterial) 		ENSDART00000016139 (lancl1-001) 6518806-6541068 protein_coding
ENSDART00000123563 (lancl1-003) 6534592-6541073 retained_intron
ENSDART00000132217 (lancl1-004) 6519130-6520114 retained_intron
ENSDART00000135112 (lancl1-002) 6518806-6528669 retained_intron
ENSDARG00000017441 (mylz3)
myosin, light polypeptide 3, skeletal muscle 		ENSDART00000015732 (mylz3-001) 6504059-6512263 protein_coding
ENSDART00000145445 (mylz3-010) 6504307-6511839 retained_intron
ENSDART00000147770 (mylz3-003) 6507623-6517544 protein_coding
ENSDART00000148276 (mylz3-002) 6507868-6519613 protein_coding
CIL_0000AJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168530-ENSG00000115365 CGP 9606 2:210290150-210477652
GeneTranscriptPositionBiotype
ENSG00000168530 (MYL1)
myosin, light chain 1, alkali; skeletal, fast 		ENST00000341685 (MYL1-002) 210290150-210303629 protein_coding
ENST00000352451 (MYL1-001) 210290150-210315190 protein_coding
ENST00000484290 (MYL1-004) 210293723-210303615 processed_transcript
ENST00000496436 (MYL1-003) 210291032-210303615 processed_transcript
ENSG00000234281 (LANCL1-AS1)
LANCL1 antisense RNA 1 		ENST00000416344 (LANCL1-AS1-003) 210460475-210469246 antisense
ENST00000420418 (LANCL1-AS1-001) 210324766-210468694 antisense
ENST00000433296 (LANCL1-AS1-002) 210324759-210460882 antisense
CIL_0000AJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061816-ENSMUSG00000026000 CGP 10090 1:66924295-67038872
GeneTranscriptPositionBiotype
ENSMUSG00000026000 (Lancl1)
LanC (bacterial lantibiotic synthetase component C)-like 1 		ENSMUST00000027149 (Lancl1-001) 67000517-67038865 protein_coding
ENSMUST00000113979 (Lancl1-002) 67000517-67038872 protein_coding
ENSMUST00000119559 (Lancl1-003) 67003375-67038834 protein_coding
ENSMUST00000133508 (Lancl1-005) 67007018-67021065 processed_transcript
ENSMUST00000149996 (Lancl1-004) 67009933-67038834 protein_coding
ENSMUST00000189210 (Lancl1-006) 67019609-67022218 retained_intron
ENSMUSG00000061816 (Myl1)
myosin, light polypeptide 1 		ENSMUST00000027151 (Myl1-001) 66924295-66945143 protein_coding
ENSMUST00000119429 (Myl1-002) 66924298-66935354 protein_coding
ENSMUST00000120415 (Myl1-004) 66926066-66935333 protein_coding
ENSMUST00000150542 (Myl1-003) 66925023-66935350 processed_transcript
ENSMUST00000151328 (Myl1-006) 66944463-66945404 retained_intron
ENSMUST00000160100 (Myl1-005) 66926622-66945384 protein_coding
ENSMUST00000186202 (Myl1-007) 66924295-66935637 protein_coding
ENSMUST00000186346 (Myl1-008) 66930192-66934698 retained_intron
ENSMUSG00000082212 (Gm15826)
predicted gene 15826 		ENSMUST00000121328 (Gm15826-001) 66951829-66953469 processed_pseudogene
ENSMUSG00000094191 (Rpl31-ps14)
ribosomal protein L31, pseudogene 14 		ENSMUST00000143596 (Rpl31-ps14-001) 66948563-66948940 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AJ_0001ENSDARG00000013741ENSDART00000016139ENSDART00000123563ENSDART00000132217ENSDART00000135112ENSDARG00000017441ENSDART00000015732ENSDART00000145445ENSDART00000147770ENSDART00000148276CIL_0000AJ_0002ENSG00000168530ENST00000341685ENST00000352451ENST00000484290ENST00000496436ENSG00000234281ENST00000416344ENST00000420418ENST00000433296CIL_0000AJ_0003ENSMUSG00000026000ENSMUST00000027149ENSMUST00000113979ENSMUST00000119559ENSMUST00000133508ENSMUST00000149996ENSMUST00000189210ENSMUSG00000061816ENSMUST00000027151ENSMUST00000119429ENSMUST00000120415ENSMUST00000150542ENSMUST00000151328ENSMUST00000160100ENSMUST00000186202ENSMUST00000186346ENSMUSG00000082212ENSMUST00000121328ENSMUSG00000094191ENSMUST00000143596
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AJ_0001ENSDARG00000013741ENSDART00000016139ENSDART00000135112ENSDARG00000017441ENSDART00000015732ENSDART00000145445CIL_0000AJ_0002ENSG00000168530ENST00000341685ENST00000352451ENST00000484290ENST00000496436ENSG00000234281ENST00000416344ENST00000420418ENST00000433296CIL_0000AJ_0003ENSMUSG00000026000ENSMUST00000027149ENSMUST00000113979ENSMUST00000119559ENSMUST00000149996ENSMUSG00000061816ENSMUST00000027151ENSMUST00000119429ENSMUST00000120415ENSMUST00000150542ENSMUST00000151328ENSMUST00000160100ENSMUST00000186202ENSMUST00000186346ENSMUSG00000082212ENSMUST00000121328ENSMUSG00000094191ENSMUST00000143596
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013741 ENSDART00000016139 N/A N/A N/A 58.301±3.71 N/A N/A 11.610±7.26 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000123563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135112 N/A N/A N/A 21.259±2.44 N/A N/A 21.475±5.78 7.467±3.10 N/A N/A N/A N/A N/A N/A
ENSDARG00000017441 ENSDART00000015732 N/A N/A N/A 15.463±0.00 N/A N/A 4.057±0.00 176.387±0.00 2.492±0.00 N/A 10295.600±0.00 N/A N/A N/A
ENSDART00000145445 N/A N/A N/A N/A N/A N/A N/A N/A 2.632±0.00 N/A 3292.810±0.00 N/A N/A N/A
ENSDART00000147770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168530 ENST00000341685 N/A 0.016±0.00 0.055±0.00 0.047±0.00 61.578±59.86 0.121±0.08 0.200±0.00 N/A 1.988±0.00 N/A 605.475±358.85 0.030±0.00 N/A 10.009±9.98
ENST00000352451 N/A N/A N/A 0.045±0.00 16.008±15.86 N/A N/A 0.076±0.00 2.807±0.00 N/A 803.170±0.00 0.161±0.01 N/A 1.915±0.00
ENST00000484290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A
ENST00000496436 N/A N/A N/A 0.257±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234281 ENST00000416344 0.028±0.00 N/A N/A 0.565±0.00 N/A N/A N/A N/A 0.167±0.00 0.233±0.00 1.840±0.00 0.215±0.16 0.035±0.00 0.101±0.00
ENST00000420418 N/A 0.204±0.00 N/A N/A N/A 0.139±0.00 0.047±0.00 N/A N/A N/A 1.505±1.15 0.063±0.03 0.107±0.00 0.216±0.12
ENST00000433296 0.039±0.00 0.065±0.00 0.548±0.00 0.651±0.00 0.111±0.00 N/A 0.097±0.02 0.088±0.00 0.078±0.04 0.078±0.00 N/A 0.041±0.01 N/A 0.069±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026000 ENSMUST00000027149 N/A N/A 3.012±0.53 2.226±0.00 N/A N/A N/A N/A 1.337±0.29 N/A N/A 1.084±0.00 N/A N/A
ENSMUST00000113979 5.398±2.83 30.601±7.12 2.283±0.00 2.918±0.52 9.434±5.64 9.626±0.55 2.063±0.54 4.932±1.95 2.443±1.04 8.489±3.34 1.315±0.18 11.570±7.78 0.999±0.31 28.938±3.95
ENSMUST00000119559 11.703±0.83 N/A 33.106±11.56 43.531±10.11 18.265±8.46 5.827±0.88 9.712±2.42 15.322±2.53 9.538±3.37 7.035±1.56 19.258±2.23 18.299±6.07 13.787±1.40 231.751±85.41
ENSMUST00000133508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149996 17.649±1.97 22.542±2.40 N/A N/A 17.615±2.64 13.118±1.95 N/A 16.090±0.00 N/A N/A N/A 27.316±5.09 N/A N/A
ENSMUST00000189210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061816 ENSMUST00000027151 1.066±0.04 0.184±0.08 N/A 0.174±0.00 1.206±0.00 0.084±0.00 N/A N/A 0.466±0.45 N/A 1368.990±55.86 N/A 0.151±0.00 0.392±0.00
ENSMUST00000119429 4.125±3.88 0.331±0.22 0.463±0.29 0.351±0.10 431.905±389.27 0.111±0.00 34.648±14.40 13.500±13.19 0.839±1.42 20.206±18.10 9807.496±762.85 2.922±1.72 0.199±0.10 0.380±0.27
ENSMUST00000120415 N/A 0.304±0.00 N/A N/A N/A 0.269±0.00 12.264±1.52 N/A N/A 1.478±0.00 N/A 0.811±0.14 0.082±0.00 N/A
ENSMUST00000150542 N/A 0.725±0.00 N/A 0.541±0.40 127.984±0.00 0.400±0.20 N/A 0.310±0.02 N/A 7.013±6.17 N/A 1.284±1.39 0.176±0.09 0.295±0.10
ENSMUST00000151328 N/A 0.242±0.00 N/A N/A N/A 0.356±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160100 5.489±0.00 0.611±0.10 N/A N/A 2.357±0.69 N/A N/A 0.106±0.00 0.048±0.00 N/A N/A 0.353±0.00 0.147±0.00 0.066±0.00
ENSMUST00000186202 N/A 0.241±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186346 N/A 1.415±0.00 N/A N/A N/A N/A N/A N/A 0.208±0.00 N/A N/A N/A 0.965±0.00 N/A
ENSMUSG00000082212 ENSMUST00000121328 0.037±0.00 N/A 0.012±0.00 0.039±0.01 N/A N/A N/A N/A 0.005±0.00 N/A 0.016±0.00 N/A N/A 0.071±0.00
ENSMUSG00000094191 ENSMUST00000143596 0.390±0.18 N/A 17.655±5.23 5.231±3.74 0.283±0.05 0.302±0.00 0.246±0.16 0.281±0.11 7.449±10.53 0.388±0.12 0.298±0.05 0.372±0.05 0.537±0.27 0.152±0.00

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