C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000B6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061461-ENSDARG00000038894 CGP 7955 2:27460033-27478351
GeneTranscriptPositionBiotype
ENSDARG00000038894 (tmx3)
thioredoxin-related transmembrane protein 3
ENSDART00000137053 (tmx3-002) 27473495-27478351 protein_coding
ENSDART00000141289 (tmx3-003) 27467316-27475710 retained_intron
ENSDART00000145835 (tmx3-001) 27466576-27477384 protein_coding
ENSDARG00000061461 (dsela)
dermatan sulfate epimerase-like a
ENSDART00000087687 (dsela-001) 27460033-27463608 protein_coding
ENSDART00000155771 (dsela-201) 27460051-27463482 protein_coding
ENSDARG00000092151 (si:dkey-40i22.5)
si:dkey-40i22.5
ENSDART00000137517 (si:dkey-40i22.5-001) 27469184-27472351 processed_transcript
CIL_0000B6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171451-ENSG00000166479 CGP 9606 18:67506582-68715298
GeneTranscriptPositionBiotype
ENSG00000150636 (CCDC102B)
coiled-coil domain containing 102B
ENST00000319445 (CCDC102B-201) 68734732-69055189 protein_coding
ENST00000358653 (CCDC102B-202) 68837351-68897617 protein_coding
ENST00000360242 (CCDC102B-001) 68798080-69055189 protein_coding
ENST00000577772 (CCDC102B-003) 68823374-68897793 processed_transcript
ENST00000577800 (CCDC102B-009) 68846364-68897632 retained_intron
ENST00000578970 (CCDC102B-012) 68715235-68837040 protein_coding
ENST00000580292 (CCDC102B-006) 68715313-68755005 processed_transcript
ENST00000581103 (CCDC102B-010) 68846395-68874965 retained_intron
ENST00000581520 (CCDC102B-011) 68798415-68837175 protein_coding
ENST00000582077 (CCDC102B-007) 68715209-68718130 processed_transcript
ENST00000582371 (CCDC102B-008) 68715275-68837135 protein_coding
ENST00000584156 (CCDC102B-005) 68836764-69011224 protein_coding
ENST00000584775 (CCDC102B-002) 68715275-68874709 protein_coding
ENSG00000166479 (TMX3)
thioredoxin-related transmembrane protein 3
ENST00000299608 (TMX3-001) 68673688-68715298 protein_coding
ENST00000443099 (TMX3-004) 68691014-68715057 protein_coding
ENST00000544714 (TMX3-014) 68706280-68715092 protein_coding
ENST00000562706 (TMX3-003) 68696936-68715058 protein_coding
ENST00000564008 (TMX3-008) 68697226-68715065 nonsense_mediated_decay
ENST00000564631 (TMX3-002) 68676839-68715077 nonsense_mediated_decay
ENST00000565918 (TMX3-006) 68697226-68715069 nonsense_mediated_decay
ENST00000566135 (TMX3-010) 68677028-68681322 processed_transcript
ENST00000566887 (TMX3-009) 68688417-68691353 processed_transcript
ENST00000569053 (TMX3-005) 68689687-68715035 nonsense_mediated_decay
ENST00000569982 (TMX3-007) 68697931-68714443 nonsense_mediated_decay
ENST00000578765 (TMX3-011) 68682925-68687977 retained_intron
ENST00000578816 (TMX3-012) 68676710-68679577 retained_intron
ENST00000580785 (TMX3-013) 68697376-68700423 retained_intron
ENSG00000171451 (DSEL)
dermatan sulfate epimerase-like
ENST00000310045 (DSEL-001) 67506582-67516980 protein_coding
ENSG00000260747 (RP11-421N8.1)
ENST00000567372 (RP11-421N8.1-001) 68277802-68278243 processed_pseudogene
ENSG00000263355 (AKR1B10P2)
aldo-keto reductase family 1, member B10 pseudogene 2
ENST00000577332 (AKR1B10P2-001) 68455951-68456877 processed_pseudogene
ENSG00000263424 (CTD-2541J13.2)
ENST00000581951 (CTD-2541J13.2-002) 67506589-67511296 antisense
ENST00000583493 (CTD-2541J13.2-001) 67506589-67514030 antisense
ENSG00000263594 (RP11-28O3.2)
ENST00000578039 (RP11-28O3.2-001) 67672221-67676078 lincRNA
ENSG00000264697 (RP11-585K6.2)
ENST00000583846 (RP11-585K6.2-001) 68527970-68528123 processed_pseudogene
ENSG00000264699 (RP11-421N8.2)
ENST00000581844 (RP11-421N8.2-001) 68258339-68264827 lincRNA
ENSG00000264869 (RP11-526H11.1)
ENST00000580057 (RP11-526H11.1-001) 68102116-68114377 lincRNA
ENSG00000265425 (RP11-128D14.1)
ENST00000577835 (RP11-128D14.1-001) 68427030-68436918 lincRNA
ENSG00000265472 (RP11-28O3.1)
ENST00000577280 (RP11-28O3.1-001) 67707929-67708246 processed_pseudogene
ENSG00000265555 (RP11-638L3.3)
ENST00000580659 (RP11-638L3.3-001) 67808505-67814822 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B6_0001ENSDARG00000038894ENSDART00000137053ENSDART00000141289ENSDART00000145835ENSDARG00000061461ENSDART00000087687ENSDART00000155771ENSDARG00000092151ENSDART00000137517CIL_0000B6_0002ENSG00000150636ENST00000319445ENST00000358653ENST00000360242ENST00000577772ENST00000577800ENST00000578970ENST00000580292ENST00000581103ENST00000581520ENST00000582077ENST00000582371ENST00000584156ENST00000584775ENSG00000166479ENST00000299608ENST00000443099ENST00000544714ENST00000562706ENST00000564008ENST00000564631ENST00000565918ENST00000566135ENST00000566887ENST00000569053ENST00000569982ENST00000578765ENST00000578816ENST00000580785ENSG00000171451ENST00000310045ENSG00000260747ENST00000567372ENSG00000263355ENST00000577332ENSG00000263424ENST00000581951ENST00000583493ENSG00000263594ENST00000578039ENSG00000264697ENST00000583846ENSG00000264699ENST00000581844ENSG00000264869ENST00000580057ENSG00000265425ENST00000577835ENSG00000265472ENST00000577280ENSG00000265555ENST00000580659
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B6_0001ENSDARG00000038894ENSDART00000137053ENSDART00000145835ENSDARG00000061461ENSDART00000087687ENSDART00000155771ENSDARG00000092151ENSDART00000137517CIL_0000B6_0002ENSG00000150636ENST00000319445ENST00000360242ENST00000577772ENST00000584156ENST00000584775ENSG00000166479ENST00000299608ENST00000562706ENST00000564631ENST00000566887ENST00000578816ENSG00000171451ENST00000310045ENSG00000260747ENST00000567372ENSG00000263355ENST00000577332ENSG00000263424ENST00000581951ENST00000583493ENSG00000263594ENST00000578039ENSG00000264697ENST00000583846ENSG00000264699ENST00000581844ENSG00000264869ENST00000580057ENSG00000265425ENST00000577835ENSG00000265472ENST00000577280ENSG00000265555ENST00000580659
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038894 ENSDART00000137053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00 N/A N/A N/A
ENSDART00000141289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145835 N/A N/A N/A 0.212±0.12 N/A N/A 0.285±0.35 0.233±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000061461 ENSDART00000087687 N/A N/A N/A 0.290±0.00 N/A N/A 1.082±0.00 N/A N/A N/A 0.383±0.00 N/A N/A N/A
ENSDART00000155771 N/A N/A N/A 0.191±0.12 N/A N/A 0.765±0.41 0.252±0.00 0.118±0.00 N/A N/A N/A N/A N/A
ENSDARG00000092151 ENSDART00000137517 N/A N/A N/A 0.687±0.14 N/A N/A 0.606±0.36 2.183±1.55 N/A N/A 0.171±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150636 ENST00000319445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.574±0.00 N/A N/A
ENST00000358653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000360242 N/A 4.121±0.00 N/A N/A N/A N/A N/A N/A 1.607±0.00 3.595±0.79 N/A N/A 1.923±0.26 N/A
ENST00000577772 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.808±0.00 N/A 3.171±0.00 N/A N/A
ENST00000577800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.441±0.00 N/A
ENST00000584775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.746±0.00
ENSG00000166479 ENST00000299608 5.289±0.00 4.772±0.00 2.971±0.00 6.571±2.07 3.213±0.61 4.388±0.63 3.454±1.30 5.619±0.00 1.302±0.88 6.396±2.37 0.585±0.08 2.791±0.43 2.661±0.77 4.086±0.06
ENST00000443099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.642±0.00 N/A N/A N/A
ENST00000564008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564631 N/A N/A N/A N/A 5.456±0.00 N/A 2.191±0.00 N/A 5.766±0.00 N/A N/A 3.214±0.00 5.057±0.00 N/A
ENST00000565918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566887 N/A N/A 61.096±0.00 N/A N/A N/A N/A 11.137±0.00 N/A N/A N/A N/A N/A N/A
ENST00000569053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.406±0.00 15.363±0.00 22.413±0.00
ENST00000580785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171451 ENST00000310045 1.351±0.00 0.585±0.00 0.998±0.00 1.461±0.31 1.659±0.82 0.950±0.16 0.320±0.03 0.624±0.15 1.004±0.17 0.651±0.00 0.134±0.03 0.674±0.36 0.884±0.17 0.886±0.44
ENSG00000260747 ENST00000567372 0.028±0.00 0.029±0.00 N/A 0.057±0.00 N/A 0.079±0.00 0.296±0.00 0.171±0.00 0.094±0.07 1.287±0.00 0.129±0.00 0.079±0.00 0.171±0.04 0.099±0.00
ENSG00000263355 ENST00000577332 N/A N/A N/A N/A 0.024±0.00 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A 0.011±0.00
ENSG00000263424 ENST00000581951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.958±0.00 N/A N/A N/A
ENST00000583493 N/A 0.417±0.00 2.819±0.00 3.723±0.36 1.670±0.33 1.379±0.00 0.265±0.11 0.887±0.17 1.824±1.38 2.053±1.04 0.099±0.02 1.258±0.86 1.258±0.00 0.605±0.00
ENSG00000263594 ENST00000578039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.172±0.00
ENSG00000264697 ENST00000583846 N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A
ENSG00000264699 ENST00000581844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00
ENSG00000264869 ENST00000580057 N/A N/A N/A N/A N/A 1.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265425 ENST00000577835 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A 0.024±0.00
ENSG00000265472 ENST00000577280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.357±0.92
ENSG00000265555 ENST00000580659 0.019±0.00 0.084±0.00 N/A 0.019±0.00 0.009±0.00 0.008±0.00 0.042±0.00 0.013±0.00 0.004±0.00 0.033±0.00 N/A 0.009±0.01 N/A 0.050±0.01

Loading