C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000BP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170509-ENSG00000198189 CGP 9606 4:87303789-87391386
GeneTranscriptPositionBiotype
ENSG00000170509 (HSD17B13)
hydroxysteroid (17-beta) dehydrogenase 13 		ENST00000302219 (HSD17B13-002) 87303789-87322886 protein_coding
ENST00000328546 (HSD17B13-001) 87303789-87322906 protein_coding
ENSG00000198189 (HSD17B11)
hydroxysteroid (17-beta) dehydrogenase 11 		ENST00000358290 (HSD17B11-001) 87336610-87391386 protein_coding
ENST00000502576 (HSD17B11-007) 87337212-87374414 processed_transcript
ENST00000507286 (HSD17B11-003) 87337275-87391149 protein_coding
ENST00000507518 (HSD17B11-004) 87336950-87373278 processed_transcript
ENST00000508413 (HSD17B11-008) 87374822-87391188 processed_transcript
ENST00000512344 (HSD17B11-006) 87337049-87366000 processed_transcript
ENST00000513854 (HSD17B11-005) 87340311-87366067 retained_intron
ENSG00000240966 (RN7SL681P)
RNA, 7SL, cytoplasmic 681, pseudogene 		ENST00000482763 (RN7SL681P-201) 87386883-87387174 misc_RNA
CIL_0000BP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034528-ENSMUSG00000029311 CGP 10090 5:103955440-104021919
GeneTranscriptPositionBiotype
ENSMUSG00000029311 (Hsd17b11)
hydroxysteroid (17-beta) dehydrogenase 11 		ENSMUST00000031251 (Hsd17b11-001) 103989762-104021919 protein_coding
ENSMUST00000119025 (Hsd17b11-002) 104001732-104021838 protein_coding
ENSMUSG00000034528 (Hsd17b13)
hydroxysteroid (17-beta) dehydrogenase 13 		ENSMUST00000048118 (Hsd17b13-002) 103955440-103977364 protein_coding
ENSMUST00000112803 (Hsd17b13-001) 103963461-103977410 protein_coding
ENSMUST00000120320 (Hsd17b13-003) 103963461-103977326 protein_coding
ENSMUSG00000082527 (Gm8200)
predicted gene 8200 		ENSMUST00000122390 (Gm8200-001) 103989370-103989591 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000BP_0001ENSG00000170509ENST00000302219ENST00000328546ENSG00000198189ENST00000358290ENST00000502576ENST00000507286ENST00000507518ENST00000508413ENST00000512344ENST00000513854ENSG00000240966ENST00000482763CIL_0000BP_0002ENSMUSG00000029311ENSMUST00000031251ENSMUST00000119025ENSMUSG00000034528ENSMUST00000048118ENSMUST00000112803ENSMUST00000120320ENSMUSG00000082527ENSMUST00000122390
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000BP_0001ENSG00000170509ENST00000302219ENST00000328546ENSG00000198189ENST00000358290ENST00000502576ENST00000507286ENSG00000240966ENST00000482763CIL_0000BP_0002ENSMUSG00000029311ENSMUST00000031251ENSMUSG00000034528ENSMUST00000048118ENSMUST00000112803ENSMUST00000120320ENSMUSG00000082527ENSMUST00000122390
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170509 ENST00000302219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A
ENST00000328546 N/A N/A N/A N/A 3.975±2.29 N/A N/A 119.897±0.00 29.350±0.00 N/A N/A N/A 2.305±0.00 N/A
ENSG00000198189 ENST00000358290 33.658±0.00 15.645±0.00 2.129±0.00 8.600±3.48 11.872±3.78 36.705±16.13 5.117±3.60 23.878±8.49 33.010±27.15 24.649±15.07 3.398±2.99 19.108±4.20 11.525±0.82 7.892±4.35
ENST00000502576 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.974±0.00 N/A N/A N/A N/A
ENST00000507286 12.307±0.00 N/A 2.298±0.00 N/A N/A N/A 0.657±0.00 N/A N/A N/A 2.107±0.00 28.956±0.00 7.810±0.00 1.816±0.00
ENST00000507518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240966 ENST00000482763 0.129±0.00 0.070±0.00 N/A N/A N/A 0.760±0.29 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029311 ENSMUST00000031251 26.914±7.94 21.447±1.80 39.469±0.31 5.520±3.12 18.083±2.16 36.971±4.36 6.840±1.31 38.660±3.95 37.135±22.22 37.064±0.96 3.716±0.40 34.899±8.42 41.711±10.45 2.874±0.94
ENSMUST00000119025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034528 ENSMUST00000048118 N/A N/A 0.070±0.00 0.024±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00
ENSMUST00000112803 0.180±0.00 N/A 0.624±0.00 0.162±0.00 0.345±0.00 6.728±4.58 0.113±0.00 N/A 118.096±84.28 0.104±0.00 N/A 0.418±0.18 0.034±0.01 0.161±0.00
ENSMUST00000120320 0.210±0.10 N/A N/A 0.014±0.00 0.382±0.27 N/A 0.035±0.00 0.065±0.03 N/A 0.097±0.00 N/A 0.238±0.06 0.040±0.00 0.080±0.04
ENSMUSG00000082527 ENSMUST00000122390 1.051±0.00 N/A 0.172±0.00 N/A N/A N/A N/A 0.753±0.00 0.210±0.04 1.169±0.00 N/A N/A 0.711±0.49 N/A

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