C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000C8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026333-ENSDARG00000063089 CGP 7955 23:8976008-9188283
GeneTranscriptPositionBiotype
ENSDARG00000026333 (xkr7)
XK, Kell blood group complex subunit-related family, member 7 		ENSDART00000034380 (xkr7-001) 9096057-9121915 protein_coding
ENSDART00000125279 (xkr7-201) 8976008-9121089 protein_coding
ENSDARG00000063089 (ccm2l)
cerebral cavernous malformation 2-like 		ENSDART00000091899 (ccm2l-201) 9142490-9188283 protein_coding
ENSDART00000140455 (ccm2l-002) 9142467-9161837 protein_coding
ENSDART00000144533 (ccm2l-001) 9174020-9183050 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000C8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000260903-ENSG00000101331 CGP 9606 20:31968002-32032180
GeneTranscriptPositionBiotype
ENSG00000101331 (CCM2L)
cerebral cavernous malformation 2-like 		ENST00000262659 (CCM2L-001) 32010450-32032180 protein_coding
ENST00000452892 (CCM2L-003) 32019218-32032180 protein_coding
ENSG00000226239 (RP1-310O13.7)
 ENST00000449519 (RP1-310O13.7-001) 32027753-32031575 antisense
ENSG00000252623 (RNA5SP481)
RNA, 5S ribosomal pseudogene 481 		ENST00000516814 (RNA5SP481-201) 32008351-32008472 rRNA
ENSG00000260903 (XKR7)
XK, Kell blood group complex subunit-related family, member 7 		ENST00000562532 (XKR7-001) 31968002-32003387 protein_coding
ENSG00000278012 (RP1-310O13.13)
 ENST00000616850 (RP1-310O13.13-001) 31970181-31970831 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0000C8_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042631-ENSMUSG00000027474 CGP 10090 2:153031852-153081735
GeneTranscriptPositionBiotype
ENSMUSG00000027474 (Ccm2l)
cerebral cavernous malformation 2-like 		ENSMUST00000109800 (Ccm2l-002) 153066002-153081735 protein_coding
ENSMUST00000127549 (Ccm2l-003) 153065984-153071143 processed_transcript
ENSMUST00000127898 (Ccm2l-001) 153065955-153081735 processed_transcript
ENSMUST00000129377 (Ccm2l-004) 153065998-153070950 protein_coding
ENSMUSG00000042631 (Xkr7)
X Kell blood group precursor related family member 7 homolog 		ENSMUST00000037235 (Xkr7-001) 153031852-153055775 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000C8_0001ENSDARG00000026333ENSDART00000034380ENSDART00000125279ENSDARG00000063089ENSDART00000091899ENSDART00000140455ENSDART00000144533CIL_0000C8_0002ENSG00000101331ENST00000262659ENST00000452892ENSG00000226239ENST00000449519ENSG00000252623ENST00000516814ENSG00000260903ENST00000562532ENSG00000278012ENST00000616850CIL_0000C8_0003ENSMUSG00000027474ENSMUST00000109800ENSMUST00000127549ENSMUST00000127898ENSMUST00000129377ENSMUSG00000042631ENSMUST00000037235
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000C8_0001ENSDARG00000026333ENSDART00000034380ENSDART00000125279ENSDARG00000063089ENSDART00000091899ENSDART00000144533CIL_0000C8_0002ENSG00000101331ENST00000262659ENST00000452892ENSG00000226239ENST00000449519ENSG00000252623ENST00000516814ENSG00000260903ENST00000562532ENSG00000278012ENST00000616850CIL_0000C8_0003ENSMUSG00000027474ENSMUST00000109800ENSMUST00000127549ENSMUST00000127898ENSMUSG00000042631ENSMUST00000037235
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026333 ENSDART00000034380 N/A N/A N/A 3.221±1.80 N/A N/A 0.063±0.01 0.027±0.00 0.020±0.00 N/A 0.172±0.00 N/A N/A N/A
ENSDART00000125279 N/A N/A N/A 3.678±0.00 N/A N/A N/A N/A N/A N/A 0.340±0.00 N/A N/A N/A
ENSDARG00000063089 ENSDART00000091899 N/A N/A N/A 2.056±0.00 N/A N/A 5.614±0.00 1.057±0.00 0.188±0.00 N/A 1.072±0.00 N/A N/A N/A
ENSDART00000140455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144533 N/A N/A N/A N/A N/A N/A N/A 0.520±0.00 0.807±0.00 N/A 3.074±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101331 ENST00000262659 N/A N/A 0.181±0.00 0.296±0.00 2.095±0.00 0.736±0.00 1.473±0.00 N/A N/A N/A 0.975±0.00 0.782±0.20 2.889±0.58 0.381±0.00
ENST00000452892 1.131±0.00 N/A N/A N/A 5.032±0.00 N/A 0.856±0.00 0.903±0.08 0.328±0.04 N/A 0.782±0.00 1.826±1.17 2.454±0.00 1.229±0.00
ENSG00000226239 ENST00000449519 1.579±0.00 3.156±0.00 N/A 0.605±0.00 0.628±0.44 0.505±0.00 0.501±0.32 0.752±0.00 0.222±0.09 0.864±0.00 0.399±0.00 0.564±0.23 2.141±0.00 0.954±0.07
ENSG00000252623 ENST00000516814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A
ENSG00000260903 ENST00000562532 N/A 0.011±0.00 N/A 0.608±0.16 0.006±0.00 0.015±0.00 0.008±0.01 0.015±0.01 N/A 0.028±0.00 N/A 0.008±0.00 0.037±0.00 0.108±0.01
ENSG00000278012 ENST00000616850 N/A N/A N/A 0.292±0.09 N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A 0.189±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027474 ENSMUST00000109800 1.333±0.00 3.556±0.80 1.308±0.37 0.676±0.11 2.771±0.01 1.003±0.00 N/A 1.721±0.00 0.665±0.00 14.665±3.70 N/A 2.466±1.26 3.428±0.00 0.079±0.01
ENSMUST00000127549 5.001±0.44 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.590±2.27 N/A 0.499±0.20
ENSMUST00000127898 16.291±10.23 5.967±2.38 4.042±0.00 0.839±0.25 3.850±0.85 1.391±0.43 3.704±1.26 3.450±2.26 0.775±0.35 31.190±10.91 1.608±0.51 3.487±1.27 0.527±0.17 0.100±0.05
ENSMUST00000129377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042631 ENSMUST00000037235 N/A 0.481±0.17 0.019±0.00 3.233±2.76 0.033±0.00 0.170±0.06 0.027±0.02 0.014±0.00 0.005±0.00 0.022±0.00 0.029±0.00 0.024±0.00 0.008±0.00 0.487±0.20

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