C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000D1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163626-ENSG00000132466 CGP 9606 4:73056080-73258798
GeneTranscriptPositionBiotype
ENSG00000132466 (ANKRD17)
ankyrin repeat domain 17 		ENST00000330838 (ANKRD17-002) 73075686-73258798 protein_coding
ENST00000358602 (ANKRD17-001) 73073376-73258785 protein_coding
ENST00000509867 (ANKRD17-003) 73075686-73223114 protein_coding
ENST00000510127 (ANKRD17-009) 73077369-73080810 processed_transcript
ENST00000513908 (ANKRD17-010) 73098073-73102779 retained_intron
ENST00000514252 (ANKRD17-004) 73113084-73153935 processed_transcript
ENST00000558247 (ANKRD17-012) 73075238-73258322 protein_coding
ENST00000559367 (ANKRD17-015) 73161192-73223039 processed_transcript
ENST00000560507 (ANKRD17-014) 73100861-73104080 processed_transcript
ENST00000561029 (ANKRD17-011) 73102463-73258798 protein_coding
ENSG00000163626 (COX18)
COX18 cytochrome C oxidase assembly factor 		ENST00000295890 (COX18-001) 73056080-73069741 protein_coding
ENST00000421792 (COX18-002) 73068551-73069755 processed_transcript
ENST00000449739 (COX18-003) 73056080-73069741 nonsense_mediated_decay
ENST00000507544 (COX18-006) 73058076-73069692 protein_coding
ENST00000510031 (COX18-004) 73058114-73069726 nonsense_mediated_decay
ENSG00000248641 (HMGA1P2)
high mobility group AT-hook 1 pseudogene 2 		ENST00000430198 (HMGA1P2-001) 73098822-73099145 processed_pseudogene
CIL_0000D1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035505-ENSMUSG00000055204 CGP 10090 5:90214724-90366185
GeneTranscriptPositionBiotype
ENSMUSG00000035505 (Cox18)
cytochrome c oxidase assembly protein 18 		ENSMUST00000048363 (Cox18-001) 90214724-90224001 protein_coding
ENSMUST00000118816 (Cox18-002) 90214724-90223972 protein_coding
ENSMUST00000131068 (Cox18-004) 90217534-90219791 retained_intron
ENSMUST00000133905 (Cox18-006) 90214727-90215581 processed_transcript
ENSMUST00000144898 (Cox18-005) 90214727-90217879 retained_intron
ENSMUST00000148480 (Cox18-003) 90218935-90223939 nonsense_mediated_decay
ENSMUSG00000055204 (Ankrd17)
ankyrin repeat domain 17 		ENSMUST00000014421 (Ankrd17-201) 90227190-90366185 protein_coding
ENSMUST00000081914 (Ankrd17-202) 90227190-90366185 protein_coding
ENSMUST00000168058 (Ankrd17-203) 90253193-90366185 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D1_0001ENSG00000132466ENST00000330838ENST00000358602ENST00000509867ENST00000510127ENST00000513908ENST00000514252ENST00000558247ENST00000559367ENST00000560507ENST00000561029ENSG00000163626ENST00000295890ENST00000421792ENST00000449739ENST00000507544ENST00000510031ENSG00000248641ENST00000430198CIL_0000D1_0002ENSMUSG00000035505ENSMUST00000048363ENSMUST00000118816ENSMUST00000131068ENSMUST00000133905ENSMUST00000144898ENSMUST00000148480ENSMUSG00000055204ENSMUST00000014421ENSMUST00000081914ENSMUST00000168058
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D1_0001ENSG00000132466ENST00000330838ENST00000358602ENST00000509867ENST00000514252ENST00000558247ENST00000561029ENSG00000163626ENST00000295890ENST00000421792ENST00000449739ENST00000507544ENST00000510031ENSG00000248641ENST00000430198CIL_0000D1_0002ENSMUSG00000035505ENSMUST00000048363ENSMUST00000118816ENSMUST00000131068ENSMUST00000133905ENSMUST00000144898ENSMUST00000148480ENSMUSG00000055204ENSMUST00000014421ENSMUST00000081914ENSMUST00000168058
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132466 ENST00000330838 4.057±0.00 3.301±0.00 1.688±0.00 3.925±0.00 3.873±0.00 6.013±1.83 2.739±0.00 3.793±0.00 2.875±0.86 2.785±0.79 2.112±0.42 3.132±1.11 1.366±0.06 2.946±0.72
ENST00000358602 N/A N/A N/A 0.874±0.00 N/A N/A N/A N/A N/A N/A N/A 0.891±0.00 0.640±0.00 N/A
ENST00000509867 N/A N/A 3.232±0.00 4.081±2.52 4.316±0.00 N/A 2.422±0.73 4.597±0.00 3.141±0.00 6.217±0.00 2.710±0.92 3.248±0.91 3.406±0.00 N/A
ENST00000510127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514252 N/A N/A N/A N/A N/A 7.846±0.00 N/A N/A N/A 3.631±0.00 N/A 5.109±0.00 N/A N/A
ENST00000558247 2.516±0.00 1.483±0.00 1.158±0.00 4.193±0.00 2.338±0.53 N/A 1.754±0.11 2.569±0.00 2.630±0.00 2.736±0.00 N/A 4.078±1.90 3.358±2.51 3.826±1.80
ENST00000559367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.954±0.00 7.800±0.00
ENSG00000163626 ENST00000295890 1.040±0.00 3.770±0.00 0.404±0.00 1.854±0.03 0.658±0.18 0.871±0.00 1.125±0.43 1.829±0.57 1.545±0.74 0.524±0.26 N/A 2.149±1.30 N/A 2.649±0.00
ENST00000421792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.596±0.00 N/A N/A N/A
ENST00000449739 2.203±0.00 0.610±0.00 N/A 1.673±0.00 4.205±0.00 0.375±0.00 1.272±0.00 2.359±0.00 1.940±0.00 N/A 0.408±0.00 1.415±0.00 2.314±0.00 1.150±0.20
ENST00000507544 N/A N/A 1.294±0.00 N/A N/A N/A 1.435±0.67 N/A N/A N/A N/A N/A N/A N/A
ENST00000510031 1.757±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248641 ENST00000430198 0.133±0.00 N/A N/A 0.167±0.00 0.081±0.00 N/A N/A 0.079±0.00 N/A N/A 0.066±0.00 0.194±0.02 0.193±0.00 0.133±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035505 ENSMUST00000048363 3.720±1.43 33.486±8.57 4.251±0.74 2.423±0.03 4.540±3.23 4.246±1.89 1.856±0.00 2.400±0.99 3.287±1.59 4.302±0.89 1.586±0.58 6.484±3.68 4.185±1.37 1.811±0.68
ENSMUST00000118816 5.697±0.97 25.540±7.61 1.582±0.34 2.010±0.11 3.438±0.32 5.425±2.30 3.018±0.33 3.673±1.19 2.991±1.60 2.878±0.68 1.540±0.43 6.238±1.68 3.344±2.96 2.611±0.91
ENSMUST00000131068 N/A N/A N/A N/A 2.727±0.00 N/A N/A N/A N/A N/A N/A N/A 0.847±0.00 N/A
ENSMUST00000133905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.552±1.15 N/A
ENSMUST00000144898 N/A N/A N/A 1.768±0.00 7.444±0.00 N/A N/A N/A N/A N/A 0.554±0.00 2.033±0.00 1.022±0.27 N/A
ENSMUST00000148480 N/A N/A 2.212±0.00 N/A N/A N/A N/A N/A 1.517±0.00 N/A 0.914±0.00 2.393±0.00 1.741±0.00 0.651±0.00
ENSMUSG00000055204 ENSMUST00000014421 3.630±0.42 3.640±0.55 1.804±0.20 6.425±2.66 3.877±1.35 3.155±0.55 2.456±0.68 2.950±0.41 1.992±0.40 3.225±0.37 2.120±0.39 5.195±2.94 13.179±5.88 2.285±0.29
ENSMUST00000081914 13.632±3.01 9.623±0.47 6.209±0.96 9.489±2.58 10.905±3.18 9.401±1.51 6.715±1.35 9.863±0.98 5.520±1.97 8.386±0.96 3.000±0.37 15.879±3.42 14.989±2.77 5.861±0.41
ENSMUST00000168058 N/A N/A N/A 6.700±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.362±0.00

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