C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000D9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000080493-ENSG00000145321 CGP 9606 4:71187286-71804041
GeneTranscriptPositionBiotype
ENSG00000080493 (SLC4A4)
solute carrier family 4 (sodium bicarbonate cotransporter), member 4 		ENST00000264485 (SLC4A4-002) 71187286-71569717 protein_coding
ENST00000340595 (SLC4A4-001) 71339053-71572087 protein_coding
ENST00000351898 (SLC4A4-003) 71187327-71568458 protein_coding
ENST00000425175 (SLC4A4-201) 71187286-71572087 protein_coding
ENST00000512686 (SLC4A4-004) 71339053-71473319 protein_coding
ENST00000514331 (SLC4A4-005) 71255218-71473307 processed_transcript
ENSG00000145321 (GC)
group-specific component (vitamin D binding protein) 		ENST00000273951 (GC-001) 71741693-71784362 protein_coding
ENST00000503364 (GC-009) 71741708-71754478 processed_transcript
ENST00000503472 (GC-005) 71741739-71769400 processed_transcript
ENST00000504199 (GC-006) 71741696-71804041 protein_coding
ENST00000505234 (GC-008) 71763804-71769602 retained_intron
ENST00000506245 (GC-007) 71765470-71786010 protein_coding
ENST00000509740 (GC-003) 71741728-71784065 nonsense_mediated_decay
ENST00000513476 (GC-004) 71741727-71784046 protein_coding
ENSG00000249170 (RP11-1J11.1)
 ENST00000514650 (RP11-1J11.1-001) 71300258-71301235 processed_pseudogene
ENSG00000270098 (LDHAL6EP)
lactate dehydrogenase A-like 6E, pseudogene 		ENST00000602428 (LDHAL6EP-001) 71434405-71437924 processed_pseudogene
CIL_0000D9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060961-ENSMUSG00000035540 CGP 10090 5:88886818-89457898
GeneTranscriptPositionBiotype
ENSMUSG00000035540 (Gc)
group specific component 		ENSMUST00000049209 (Gc-201) 89417511-89457898 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D9_0001ENSG00000080493ENST00000264485ENST00000340595ENST00000351898ENST00000425175ENST00000512686ENST00000514331ENSG00000145321ENST00000273951ENST00000503364ENST00000503472ENST00000504199ENST00000505234ENST00000506245ENST00000509740ENST00000513476ENSG00000249170ENST00000514650ENSG00000270098ENST00000602428CIL_0000D9_0002ENSMUSG00000035540ENSMUST00000049209
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D9_0001ENSG00000080493ENST00000264485ENST00000340595ENST00000351898ENST00000425175ENST00000512686ENST00000514331ENSG00000145321ENST00000273951ENST00000503364ENST00000503472ENST00000504199ENST00000506245ENST00000509740ENST00000513476ENSG00000249170ENST00000514650ENSG00000270098ENST00000602428CIL_0000D9_0002ENSMUSG00000035540ENSMUST00000049209
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080493 ENST00000264485 N/A N/A N/A N/A N/A 6.698±0.00 0.504±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000340595 N/A N/A 11.138±0.00 2.135±0.00 0.611±0.00 N/A 1.036±0.00 18.165±0.00 N/A 0.673±0.00 0.129±0.00 N/A N/A 0.068±0.00
ENST00000351898 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.780±0.00 N/A N/A N/A 0.038±0.00
ENST00000425175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.271±0.00 N/A 0.343±0.00
ENST00000512686 N/A N/A 24.305±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENST00000514331 N/A N/A N/A 4.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.223±0.00 0.325±0.02
ENSG00000145321 ENST00000273951 N/A N/A 1.348±0.00 N/A N/A N/A N/A 190.353±0.00 N/A N/A 0.086±0.00 N/A N/A N/A
ENST00000503364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A
ENST00000503472 0.004±0.00 N/A N/A N/A 0.017±0.00 N/A N/A 1.833±0.00 975.179±0.00 N/A N/A N/A N/A 0.081±0.00
ENST00000504199 N/A N/A N/A N/A 1.892±0.00 N/A N/A 480.954±480.31 150.581±150.52 N/A N/A N/A N/A N/A
ENST00000505234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00
ENST00000509740 0.005±0.00 N/A N/A 0.194±0.00 N/A N/A N/A 0.584±0.00 133.689±133.60 N/A N/A 0.008±0.00 0.048±0.00 N/A
ENST00000513476 N/A N/A N/A N/A N/A N/A N/A N/A 494.991±0.00 N/A N/A N/A N/A N/A
ENSG00000249170 ENST00000514650 N/A N/A 0.867±0.00 0.682±0.00 0.379±0.00 N/A 0.244±0.22 0.241±0.22 0.202±0.00 0.995±0.00 N/A N/A N/A N/A
ENSG00000270098 ENST00000602428 0.031±0.00 N/A N/A 0.260±0.00 0.172±0.00 0.808±0.00 N/A 0.322±0.00 0.018±0.00 0.371±0.00 N/A N/A N/A 0.025±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035540 ENSMUST00000049209 0.195±0.10 0.470±0.13 0.032±0.00 0.050±0.01 4.573±0.32 0.178±0.17 0.303±0.28 35.701±1.99 987.168±691.11 0.669±0.24 0.137±0.19 0.750±0.59 29.889±33.25 0.030±0.01

Loading