C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000DU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000249459-ENSG00000108448 CGP 9606 17:18658429-18736118
GeneTranscriptPositionBiotype
ENSG00000108448 (TRIM16L)
tripartite motif containing 16-like 		ENST00000395671 (TRIM16L-001) 18722023-18736118 protein_coding
ENST00000414850 (TRIM16L-014) 18722119-18735427 protein_coding
ENST00000424146 (TRIM16L-003) 18722121-18734922 protein_coding
ENST00000449552 (TRIM16L-012) 18698010-18736118 protein_coding
ENST00000449697 (TRIM16L-010) 18698028-18704547 processed_transcript
ENST00000571542 (TRIM16L-007) 18722118-18735087 protein_coding
ENST00000571708 (TRIM16L-011) 18699215-18735490 protein_coding
ENST00000571733 (TRIM16L-008) 18722123-18731219 processed_transcript
ENST00000572555 (TRIM16L-009) 18697998-18735667 protein_coding
ENST00000573443 (TRIM16L-005) 18721777-18731213 protein_coding
ENST00000574042 (TRIM16L-019) 18727651-18736112 protein_coding
ENST00000577969 (TRIM16L-018) 18722247-18732134 nonsense_mediated_decay
ENST00000578086 (TRIM16L-016) 18701357-18704765 processed_transcript
ENST00000581904 (TRIM16L-015) 18698008-18722245 processed_transcript
ENSG00000189375 (TBC1D28)
TBC1 domain family, member 28 		ENST00000345096 (TBC1D28-001) 18635006-18642424 protein_coding
ENST00000405044 (TBC1D28-201) 18635529-18644427 protein_coding
ENST00000570881 (TBC1D28-010) 18638861-18661950 retained_intron
ENST00000572213 (TBC1D28-005) 18641022-18644427 protein_coding
ENST00000573652 (TBC1D28-003) 18641306-18644427 protein_coding
ENST00000575211 (TBC1D28-007) 18641312-18642838 protein_coding
ENST00000575220 (TBC1D28-004) 18639176-18644418 protein_coding
ENST00000575570 (TBC1D28-008) 18641665-18642829 processed_transcript
ENST00000575970 (TBC1D28-006) 18641669-18644366 processed_transcript
ENST00000579178 (TBC1D28-009) 18641839-18644417 processed_transcript
ENSG00000224126 (UBE2SP2)
ubiquitin-conjugating enzyme E2S pseudogene 2 		ENST00000428091 (UBE2SP2-001) 18677261-18677757 processed_pseudogene
ENSG00000240445 (FOXO3B)
forkhead box O3B pseudogene 		ENST00000395675 (FOXO3B-001) 18670946-18672873 processed_pseudogene
ENSG00000249459 (ZNF286B)
zinc finger protein 286B 		ENST00000285274 (ZNF286B-003) 18658429-18682228 protein_coding
ENST00000442380 (ZNF286B-007) 18681321-18682241 retained_intron
ENST00000443457 (ZNF286B-005) 18680751-18681818 protein_coding
ENST00000454745 (ZNF286B-006) 18681442-18682262 retained_intron
ENST00000545289 (ZNF286B-201) 18658429-18682259 protein_coding
ENST00000580145 (ZNF286B-009) 18672793-18682259 protein_coding
ENST00000583002 (ZNF286B-010) 18672864-18681858 protein_coding
ENSG00000264885 (RP11-815I9.4)
 ENST00000578214 (RP11-815I9.4-001) 18667629-18669461 sense_intronic
CIL_0000DU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047342-ENSMUSG00000047821 CGP 10090 11:62753377-62850808
GeneTranscriptPositionBiotype
ENSMUSG00000047342 (Zfp286)
zinc finger protein 286 		ENSMUST00000054654 (Zfp286-001) 62778387-62789462 protein_coding
ENSMUST00000108705 (Zfp286-002) 62779605-62789423 protein_coding
ENSMUST00000139798 (Zfp286-004) 62753377-62788980 processed_transcript
ENSMUST00000140072 (Zfp286-007) 62783516-62789386 processed_transcript
ENSMUST00000145474 (Zfp286-003) 62783516-62789409 processed_transcript
ENSMUST00000149215 (Zfp286-008) 62787575-62789423 processed_transcript
ENSMUST00000149230 (Zfp286-005) 62780739-62784151 processed_transcript
ENSMUST00000152602 (Zfp286-006) 62780730-62789417 processed_transcript
ENSMUSG00000047821 (Trim16)
tripartite motif-containing 16 		ENSMUST00000055006 (Trim16-001) 62820231-62842936 protein_coding
ENSMUST00000072639 (Trim16-004) 62820253-62850808 protein_coding
ENSMUST00000108703 (Trim16-002) 62820469-62842936 protein_coding
ENSMUST00000128623 (Trim16-005) 62833800-62841457 processed_transcript
ENSMUST00000147942 (Trim16-003) 62820440-62821245 processed_transcript
ENSMUSG00000064692 (Gm24151)
predicted gene, 24151 		ENSMUST00000082758 (Gm24151-201) 62776985-62777125 snoRNA
ENSMUSG00000085045 (Zfp286it)
zinc finger protein 286, intronic transcript 		ENSMUST00000138105 (Zfp286it-001) 62757178-62760558 antisense
ENSMUSG00000086674 (Zfp286os)
zinc finger protein 286, opposite strand 		ENSMUST00000128292 (Zfp286os-001) 62761236-62765554 antisense
ENSMUSG00000090173 (Fbxw10)
F-box and WD-40 domain protein 10 		ENSMUST00000036085 (Fbxw10-002) 62847069-62877465 protein_coding
ENSMUST00000127646 (Fbxw10-003) 62874859-62876753 processed_transcript
ENSMUST00000150989 (Fbxw10-201) 62847123-62877462 protein_coding
ENSMUST00000175804 (Fbxw10-005) 62847128-62851315 retained_intron
ENSMUST00000176577 (Fbxw10-001) 62847132-62877443 protein_coding
ENSMUST00000177336 (Fbxw10-004) 62847123-62877462 nonsense_mediated_decay
ENSMUSG00000096083 (Gm10428)
predicted gene 10428 		ENSMUST00000178750 (Gm10428-201) 62753100-62753498 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DU_0001ENSG00000108448ENST00000395671ENST00000414850ENST00000424146ENST00000449552ENST00000449697ENST00000571542ENST00000571708ENST00000571733ENST00000572555ENST00000573443ENST00000574042ENST00000577969ENST00000578086ENST00000581904ENSG00000189375ENST00000345096ENST00000405044ENST00000570881ENST00000572213ENST00000573652ENST00000575211ENST00000575220ENST00000575570ENST00000575970ENST00000579178ENSG00000224126ENST00000428091ENSG00000240445ENST00000395675ENSG00000249459ENST00000285274ENST00000442380ENST00000443457ENST00000454745ENST00000545289ENST00000580145ENST00000583002ENSG00000264885ENST00000578214CIL_0000DU_0002ENSMUSG00000047342ENSMUST00000054654ENSMUST00000108705ENSMUST00000139798ENSMUST00000140072ENSMUST00000145474ENSMUST00000149215ENSMUST00000149230ENSMUST00000152602ENSMUSG00000047821ENSMUST00000055006ENSMUST00000072639ENSMUST00000108703ENSMUST00000128623ENSMUST00000147942ENSMUSG00000064692ENSMUST00000082758ENSMUSG00000085045ENSMUST00000138105ENSMUSG00000086674ENSMUST00000128292ENSMUSG00000090173ENSMUST00000036085ENSMUST00000127646ENSMUST00000150989ENSMUST00000175804ENSMUST00000176577ENSMUST00000177336ENSMUSG00000096083ENSMUST00000178750
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DU_0001ENSG00000108448ENST00000395671ENST00000414850ENST00000449552ENST00000449697ENST00000571708ENST00000571733ENST00000572555ENST00000573443ENST00000574042ENST00000577969ENST00000581904ENSG00000189375ENST00000345096ENST00000405044ENSG00000224126ENST00000428091ENSG00000240445ENST00000395675ENSG00000249459ENST00000285274ENST00000545289ENST00000583002ENSG00000264885ENST00000578214CIL_0000DU_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108448 ENST00000395671 0.780±0.00 0.469±0.00 0.046±0.00 0.652±0.00 3.431±0.00 1.196±0.00 0.399±0.01 2.745±0.00 0.976±0.00 0.387±0.00 1.832±0.00 0.649±0.28 0.722±0.13 0.957±0.20
ENST00000414850 N/A N/A N/A N/A N/A 1.344±0.00 0.874±0.00 N/A N/A 0.590±0.13 1.563±0.00 N/A N/A 1.488±0.00
ENST00000424146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449552 N/A N/A N/A 0.240±0.00 N/A N/A N/A N/A N/A N/A N/A 0.111±0.00 N/A N/A
ENST00000449697 0.667±0.00 0.568±0.00 0.091±0.00 0.912±0.00 N/A N/A N/A 0.713±0.00 N/A 0.413±0.00 N/A 0.632±0.00 1.044±0.00 0.683±0.00
ENST00000571542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571708 0.340±0.00 0.399±0.00 0.051±0.00 0.487±0.00 N/A 0.229±0.11 N/A 0.582±0.00 0.224±0.00 0.357±0.00 N/A 0.313±0.11 0.268±0.00 0.476±0.00
ENST00000571733 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.592±0.00 N/A N/A 0.641±0.00 N/A
ENST00000572555 N/A N/A N/A N/A 2.018±0.00 N/A 0.386±0.00 N/A N/A N/A 1.250±0.00 0.255±0.01 N/A N/A
ENST00000573443 N/A N/A N/A N/A N/A N/A 1.132±0.00 N/A N/A 1.594±0.00 N/A 1.013±0.00 N/A N/A
ENST00000574042 N/A N/A N/A N/A 0.816±0.00 N/A 0.565±0.01 N/A 0.532±0.00 N/A N/A N/A N/A N/A
ENST00000577969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.182±0.00 N/A N/A
ENST00000578086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581904 N/A N/A 0.422±0.00 1.342±0.00 0.823±0.00 N/A N/A N/A N/A N/A 2.007±0.00 0.892±0.20 0.792±0.00 1.763±0.00
ENSG00000189375 ENST00000345096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 1.310±0.98
ENST00000405044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.240±0.00
ENST00000570881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224126 ENST00000428091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A
ENSG00000240445 ENST00000395675 0.182±0.00 0.145±0.00 N/A 0.214±0.00 0.121±0.00 0.217±0.01 0.155±0.08 0.104±0.00 0.203±0.00 0.481±0.10 0.266±0.05 0.431±0.06 0.304±0.02 0.365±0.00
ENSG00000249459 ENST00000285274 N/A 0.149±0.00 N/A 0.252±0.00 0.068±0.04 0.072±0.03 0.057±0.01 0.097±0.00 0.099±0.08 0.143±0.00 0.019±0.01 0.198±0.04 0.034±0.03 0.064±0.00
ENST00000442380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545289 0.116±0.00 N/A 0.049±0.00 0.155±0.00 0.027±0.00 0.013±0.00 N/A N/A 0.045±0.00 0.237±0.00 N/A 0.303±0.04 0.093±0.00 0.203±0.08
ENST00000580145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583002 N/A N/A N/A 0.348±0.00 N/A N/A N/A 0.632±0.00 0.211±0.00 N/A N/A 0.577±0.00 N/A N/A
ENSG00000264885 ENST00000578214 0.252±0.00 0.415±0.00 0.622±0.00 0.312±0.07 0.165±0.03 0.390±0.02 0.054±0.02 0.255±0.04 0.346±0.28 0.286±0.28 0.031±0.00 0.750±0.26 0.221±0.05 0.492±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000047342 ENSMUST00000054654 0.099±0.09 0.123±0.06 0.502±0.07 1.742±0.93 0.074±0.01 0.096±0.04 0.072±0.02 0.099±0.03 0.074±0.02 0.174±0.02 0.195±0.07 0.345±0.15 0.158±0.12 0.517±0.15
ENSMUST00000108705 0.226±0.09 N/A 0.481±0.13 1.899±0.09 0.143±0.03 0.159±0.10 0.106±0.00 0.086±0.04 0.112±0.04 0.291±0.05 0.353±0.06 0.743±0.40 0.166±0.04 0.556±0.22
ENSMUST00000139798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.536±0.00 N/A 22.730±0.00
ENSMUST00000140072 N/A N/A N/A N/A 0.157±0.01 0.155±0.01 0.150±0.00 N/A N/A N/A N/A 0.346±0.00 N/A N/A
ENSMUST00000145474 0.821±0.46 0.135±0.00 1.227±0.00 3.308±0.00 0.195±0.00 0.192±0.03 N/A 0.407±0.06 0.243±0.12 0.305±0.00 N/A 0.631±0.15 N/A 1.237±0.00
ENSMUST00000149215 0.170±0.02 0.342±0.00 N/A N/A 0.105±0.00 0.286±0.17 0.117±0.01 0.209±0.00 0.225±0.00 N/A N/A 0.535±0.08 N/A N/A
ENSMUST00000149230 0.559±0.25 0.192±0.00 N/A N/A 0.138±0.00 0.191±0.00 0.140±0.02 0.166±0.06 N/A 0.393±0.27 N/A 0.330±0.00 0.221±0.00 N/A
ENSMUST00000152602 N/A N/A N/A N/A N/A 0.227±0.00 N/A 0.212±0.00 N/A N/A N/A N/A 0.180±0.02 N/A
ENSMUSG00000047821 ENSMUST00000055006 3.904±0.59 1.055±0.32 7.987±1.13 1.190±0.27 2.865±0.89 18.164±4.33 1.740±0.30 1.228±0.41 0.246±0.12 13.113±3.82 7.780±1.66 1.654±0.75 1.155±0.83 N/A
ENSMUST00000072639 N/A 0.667±0.35 N/A N/A N/A 9.648±3.62 N/A N/A 0.040±0.00 N/A N/A 0.762±0.01 0.293±0.00 N/A
ENSMUST00000108703 1.848±0.00 N/A 2.275±0.43 0.146±0.00 2.570±2.55 5.300±1.03 0.568±0.19 0.417±0.00 0.098±0.04 5.525±1.69 3.822±0.46 1.091±0.52 0.819±0.30 N/A
ENSMUST00000128623 N/A 0.324±0.00 N/A 0.479±0.00 N/A N/A N/A N/A 0.024±0.00 N/A N/A 1.400±0.00 1.166±0.41 N/A
ENSMUST00000147942 N/A 0.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064692 ENSMUST00000082758 N/A N/A N/A 4.841±0.00 N/A N/A N/A N/A N/A N/A N/A 4.895±0.00 N/A N/A
ENSMUSG00000085045 ENSMUST00000138105 N/A N/A 0.007±0.00 0.011±0.00 0.035±0.00 0.044±0.01 0.013±0.00 0.029±0.00 N/A 0.020±0.00 N/A 0.042±0.03 0.007±0.00 1.215±0.46
ENSMUSG00000086674 ENSMUST00000128292 N/A 0.104±0.00 N/A 0.036±0.01 N/A 2.391±0.50 N/A 0.030±0.00 0.015±0.00 0.040±0.00 0.100±0.00 0.086±0.01 0.011±0.00 0.908±0.42
ENSMUSG00000090173 ENSMUST00000036085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.062±0.93
ENSMUST00000127646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 188.529±0.00
ENSMUST00000150989 N/A N/A N/A 0.263±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.923±7.83
ENSMUST00000175804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.640±0.00 N/A N/A
ENSMUST00000177336 N/A N/A N/A N/A 0.528±0.00 N/A N/A N/A 0.037±0.02 N/A N/A 0.535±0.22 N/A 7.873±1.87
ENSMUSG00000096083 ENSMUST00000178750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.084±0.00

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