C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000E0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141034-ENSG00000108591 CGP 9606 17:18039292-18107971
GeneTranscriptPositionBiotype
ENSG00000108591 (DRG2)
developmentally regulated GTP binding protein 2 		ENST00000225729 (DRG2-001) 18087886-18107971 protein_coding
ENST00000395726 (DRG2-002) 18087925-18107959 protein_coding
ENST00000467099 (DRG2-009) 18087968-18107970 nonsense_mediated_decay
ENST00000473213 (DRG2-006) 18087961-18094280 retained_intron
ENST00000482564 (DRG2-004) 18105447-18107969 retained_intron
ENST00000496428 (DRG2-005) 18087921-18099937 nonsense_mediated_decay
ENST00000497744 (DRG2-007) 18104560-18107941 retained_intron
ENST00000577450 (DRG2-018) 18087974-18100605 nonsense_mediated_decay
ENST00000577771 (DRG2-022) 18087892-18099210 retained_intron
ENST00000578173 (DRG2-010) 18087927-18098482 retained_intron
ENST00000578767 (DRG2-021) 18087962-18099221 retained_intron
ENST00000579224 (DRG2-023) 18087972-18101500 nonsense_mediated_decay
ENST00000579601 (DRG2-020) 18087949-18099662 protein_coding
ENST00000580055 (DRG2-016) 18087966-18107927 nonsense_mediated_decay
ENST00000580929 (DRG2-011) 18087976-18101517 protein_coding
ENST00000582314 (DRG2-013) 18087941-18103807 nonsense_mediated_decay
ENST00000582419 (DRG2-019) 18087965-18099050 nonsense_mediated_decay
ENST00000582528 (DRG2-008) 18095722-18107970 retained_intron
ENST00000583162 (DRG2-017) 18087979-18100261 retained_intron
ENST00000583355 (DRG2-025) 18088007-18107600 protein_coding
ENST00000584212 (DRG2-024) 18087974-18098464 retained_intron
ENSG00000141034 (GID4)
GID complex subunit 4 		ENST00000268719 (GID4-001) 18039292-18068404 protein_coding
ENST00000376345 (GID4-003) 18039445-18057467 protein_coding
ENST00000459843 (GID4-004) 18054136-18062183 protein_coding
ENST00000481836 (GID4-002) 18054148-18065283 protein_coding
ENST00000579871 (GID4-005) 18066089-18067966 processed_transcript
ENSG00000279428 (RP11-258F1.2)
 ENST00000624514 (RP11-258F1.2-001) 18107334-18110463 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0000E0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018415-ENSMUSG00000020537 CGP 10090 11:60417145-60468754
GeneTranscriptPositionBiotype
ENSMUSG00000018415 (Gid4)
GID complex subunit 4, VID24 homolog (S. cerevisiae) 		ENSMUST00000070681 (Gid4-001) 60417262-60445277 protein_coding
ENSMUST00000139477 (Gid4-002) 60417145-60450927 nonsense_mediated_decay
ENSMUSG00000020537 (Drg2)
developmentally regulated GTP binding protein 2 		ENSMUST00000018568 (Drg2-001) 60454591-60468754 protein_coding
ENSMUST00000136484 (Drg2-004) 60459429-60460335 retained_intron
ENSMUST00000138713 (Drg2-003) 60454591-60461853 retained_intron
ENSMUST00000147745 (Drg2-002) 60454624-60462651 retained_intron
ENSMUST00000155731 (Drg2-005) 60461507-60463046 retained_intron
ENSMUSG00000042709 (Atpaf2)
ATP synthase mitochondrial F1 complex assembly factor 2 		ENSMUST00000108721 (Atpaf2-001) 60400626-60417051 protein_coding
ENSMUST00000138696 (Atpaf2-003) 60403837-60417042 processed_transcript
ENSMUST00000141987 (Atpaf2-002) 60407373-60418457 processed_transcript
ENSMUST00000145532 (Atpaf2-005) 60401478-60417018 nonsense_mediated_decay
ENSMUST00000154387 (Atpaf2-004) 60405794-60417035 processed_transcript
ENSMUST00000156966 (Atpaf2-006) 60409215-60417036 retained_intron
ENSMUSG00000083412 (Gm12268)
predicted gene 12268 		ENSMUST00000118398 (Gm12268-001) 60446743-60447184 processed_pseudogene
ENSMUSG00000084249 (Gm12267)
predicted gene 12267 		ENSMUST00000121609 (Gm12267-001) 60449210-60449970 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E0_0001ENSG00000108591ENST00000225729ENST00000395726ENST00000467099ENST00000473213ENST00000482564ENST00000496428ENST00000497744ENST00000577450ENST00000577771ENST00000578173ENST00000578767ENST00000579224ENST00000579601ENST00000580055ENST00000580929ENST00000582314ENST00000582419ENST00000582528ENST00000583162ENST00000583355ENST00000584212ENSG00000141034ENST00000268719ENST00000376345ENST00000459843ENST00000481836ENST00000579871ENSG00000279428ENST00000624514CIL_0000E0_0002ENSMUSG00000018415ENSMUST00000070681ENSMUST00000139477ENSMUSG00000020537ENSMUST00000018568ENSMUST00000136484ENSMUST00000138713ENSMUST00000147745ENSMUST00000155731ENSMUSG00000042709ENSMUST00000108721ENSMUST00000138696ENSMUST00000141987ENSMUST00000145532ENSMUST00000154387ENSMUST00000156966ENSMUSG00000083412ENSMUST00000118398ENSMUSG00000084249ENSMUST00000121609
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E0_0001ENSG00000108591ENST00000225729ENST00000395726ENST00000579224ENST00000579601ENST00000580055ENST00000580929ENST00000582314ENST00000582528ENST00000583355ENSG00000141034ENST00000268719ENST00000481836ENSG00000279428ENST00000624514CIL_0000E0_0002ENSMUSG00000018415ENSMUST00000070681ENSMUST00000139477ENSMUSG00000020537ENSMUST00000018568ENSMUST00000138713ENSMUST00000147745ENSMUSG00000042709ENSMUST00000108721ENSMUST00000138696ENSMUST00000145532ENSMUST00000156966ENSMUSG00000083412ENSMUST00000118398ENSMUSG00000084249ENSMUST00000121609
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108591 ENST00000225729 5.692±0.00 3.742±0.00 N/A 3.767±0.00 2.357±0.00 2.859±0.35 2.673±1.63 1.494±0.00 2.604±0.00 2.584±1.35 N/A 9.706±7.29 N/A N/A
ENST00000395726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.640±0.00 N/A N/A
ENST00000467099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579224 5.851±0.00 N/A N/A N/A N/A N/A 4.017±0.00 N/A 15.354±0.00 N/A N/A N/A N/A N/A
ENST00000579601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.334±0.00 N/A N/A
ENST00000580055 2.648±0.00 7.951±0.00 0.995±0.00 4.376±0.00 N/A 2.032±0.00 N/A N/A N/A N/A 4.240±0.00 N/A N/A N/A
ENST00000580929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.029±0.00 N/A
ENST00000582314 N/A 5.004±0.00 N/A N/A N/A 2.204±0.00 N/A N/A N/A 3.123±0.00 N/A N/A N/A N/A
ENST00000582419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582528 N/A N/A N/A 0.869±0.00 N/A N/A 0.230±0.00 N/A 0.687±0.00 N/A N/A 0.811±0.11 N/A N/A
ENST00000583162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.930±0.00 4.274±0.00 4.796±0.00 N/A
ENST00000584212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141034 ENST00000268719 6.049±0.00 1.081±0.00 0.749±0.00 2.245±0.49 4.130±3.01 4.233±2.55 2.955±2.22 2.051±1.20 2.205±0.78 2.147±1.14 6.126±4.86 2.792±1.07 2.226±0.12 9.165±0.69
ENST00000376345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.569±0.00
ENST00000579871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279428 ENST00000624514 1.511±0.00 3.287±0.00 N/A 1.181±0.67 2.395±0.00 1.642±0.00 1.108±0.00 3.159±0.00 4.730±0.00 2.499±0.00 2.827±0.00 4.770±0.22 3.048±1.22 3.144±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018415 ENSMUST00000070681 18.346±1.18 24.217±2.38 11.480±0.93 7.516±0.39 21.343±1.67 12.516±0.99 15.357±0.77 13.615±0.97 9.628±3.55 23.661±1.04 25.256±0.68 15.636±3.64 5.194±1.85 8.248±3.28
ENSMUST00000139477 N/A 24.194±10.33 N/A N/A 6.553±0.00 3.113±0.00 N/A N/A N/A 5.419±0.00 N/A 9.984±3.09 1.290±0.00 46.869±4.31
ENSMUSG00000020537 ENSMUST00000018568 28.547±1.12 22.736±3.70 19.728±0.30 25.441±5.97 18.965±2.60 17.298±2.39 13.159±1.24 28.145±1.70 20.591±3.44 18.004±0.60 10.914±0.43 32.467±6.28 20.601±10.97 12.064±3.49
ENSMUST00000136484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138713 N/A N/A N/A 5.241±0.00 N/A N/A N/A N/A N/A N/A N/A 8.576±0.00 8.548±0.89 2.112±0.00
ENSMUST00000147745 N/A N/A N/A N/A 9.890±0.00 N/A N/A N/A N/A N/A N/A N/A 8.929±0.00 3.869±0.00
ENSMUST00000155731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042709 ENSMUST00000108721 28.867±8.14 27.366±3.12 8.862±0.96 9.459±1.67 24.239±7.82 10.369±2.60 12.554±1.37 15.755±2.29 12.365±2.55 8.884±1.70 9.777±1.03 10.149±4.20 7.713±2.94 17.781±2.96
ENSMUST00000138696 N/A N/A N/A 16.026±0.00 N/A N/A N/A N/A N/A N/A N/A 14.823±6.47 15.371±9.17 25.031±11.85
ENSMUST00000141987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145532 N/A N/A N/A 7.528±0.00 N/A N/A N/A N/A N/A N/A N/A 10.675±0.00 10.368±1.77 22.739±19.86
ENSMUST00000154387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156966 N/A 12.745±3.22 N/A N/A N/A 7.270±1.07 N/A N/A N/A N/A N/A 13.272±0.00 N/A N/A
ENSMUSG00000083412 ENSMUST00000118398 N/A N/A 0.028±0.00 0.026±0.00 N/A N/A N/A N/A 0.033±0.00 N/A N/A 0.113±0.01 0.154±0.00 0.203±0.00
ENSMUSG00000084249 ENSMUST00000121609 0.073±0.03 0.143±0.01 0.090±0.03 0.058±0.02 0.113±0.01 0.121±0.00 N/A 0.052±0.00 0.096±0.06 0.062±0.00 N/A 0.307±0.12 0.074±0.04 0.588±0.25

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