C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000EV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153048-ENSG00000187555 CGP 9606 16:8852942-8964514
GeneTranscriptPositionBiotype
ENSG00000153048 (CARHSP1)
calcium regulated heat stable protein 1, 24kDa 		ENST00000311052 (CARHSP1-002) 8854913-8869009 protein_coding
ENST00000396593 (CARHSP1-001) 8852942-8868401 protein_coding
ENST00000561530 (CARHSP1-007) 8854921-8868361 protein_coding
ENST00000562586 (CARHSP1-014) 8859064-8868354 retained_intron
ENST00000562843 (CARHSP1-015) 8858090-8868343 protein_coding
ENST00000563815 (CARHSP1-003) 8857464-8869006 retained_intron
ENST00000565287 (CARHSP1-004) 8855214-8869006 protein_coding
ENST00000567554 (CARHSP1-012) 8855065-8861713 protein_coding
ENST00000567626 (CARHSP1-009) 8859331-8861781 processed_transcript
ENST00000567908 (CARHSP1-008) 8855231-8867887 protein_coding
ENST00000568117 (CARHSP1-010) 8855271-8867428 protein_coding
ENST00000568968 (CARHSP1-013) 8855290-8861777 protein_coding
ENST00000569398 (CARHSP1-011) 8858418-8861773 protein_coding
ENST00000569572 (CARHSP1-005) 8858913-8869006 retained_intron
ENST00000570125 (CARHSP1-006) 8855234-8868719 protein_coding
ENST00000610831 (CARHSP1-201) 8852943-8861810 protein_coding
ENST00000611932 (CARHSP1-202) 8852943-8869012 protein_coding
ENST00000614449 (CARHSP1-203) 8852943-8861810 protein_coding
ENST00000618335 (CARHSP1-204) 8852943-8868719 protein_coding
ENST00000619881 (CARHSP1-205) 8852943-8867428 protein_coding
ENSG00000187555 (USP7)
ubiquitin specific peptidase 7 (herpes virus-associated) 		ENST00000344836 (USP7-001) 8892094-8963484 protein_coding
ENST00000381886 (USP7-004) 8893788-8936729 protein_coding
ENST00000542333 (USP7-003) 8902143-8949653 nonsense_mediated_decay
ENST00000562051 (USP7-016) 8899150-8900131 retained_intron
ENST00000562615 (USP7-018) 8897064-8898720 retained_intron
ENST00000563043 (USP7-022) 8898594-8901205 nonsense_mediated_decay
ENST00000563085 (USP7-002) 8895045-8956380 protein_coding
ENST00000563961 (USP7-006) 8892772-8963422 nonsense_mediated_decay
ENST00000564117 (USP7-011) 8921177-8935856 protein_coding
ENST00000565455 (USP7-005) 8893940-8936673 nonsense_mediated_decay
ENST00000565883 (USP7-019) 8895084-8898544 retained_intron
ENST00000566004 (USP7-010) 8920405-8956380 protein_coding
ENST00000566131 (USP7-015) 8899580-8900920 retained_intron
ENST00000566224 (USP7-012) 8923307-8935758 processed_transcript
ENST00000566273 (USP7-009) 8921160-8962612 protein_coding
ENST00000567113 (USP7-020) 8895059-8897254 retained_intron
ENST00000567329 (USP7-013) 8902139-8904522 retained_intron
ENST00000567692 (USP7-021) 8899175-8901185 nonsense_mediated_decay
ENST00000569230 (USP7-008) 8920443-8964514 protein_coding
ENST00000569448 (USP7-017) 8899307-8901219 retained_intron
ENST00000570256 (USP7-014) 8901933-8904533 retained_intron
ENSG00000260979 (RP11-77H9.8)
 ENST00000564485 (RP11-77H9.8-001) 8962706-8966990 lincRNA
ENSG00000261481 (RP11-77H9.6)
 ENST00000570290 (RP11-77H9.6-001) 8869251-8870032 antisense

Homo sapiens Ensembl (GRCh38)

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0000EV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000008393-ENSMUSG00000022710 CGP 10090 16:8658587-8792308
GeneTranscriptPositionBiotype
ENSMUSG00000008393 (Carhsp1)
calcium regulated heat stable protein 1 		ENSMUST00000008537 (Carhsp1-201) 8658587-8672153 protein_coding
ENSMUSG00000084737 (Gm25805)
predicted gene, 25805 		ENSMUST00000122788 (Gm25805-201) 8766169-8766276 snRNA

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000EV_0001ENSG00000153048ENST00000311052ENST00000396593ENST00000561530ENST00000562586ENST00000562843ENST00000563815ENST00000565287ENST00000567554ENST00000567626ENST00000567908ENST00000568117ENST00000568968ENST00000569398ENST00000569572ENST00000570125ENST00000610831ENST00000611932ENST00000614449ENST00000618335ENST00000619881ENSG00000187555ENST00000344836ENST00000381886ENST00000542333ENST00000562051ENST00000562615ENST00000563043ENST00000563085ENST00000563961ENST00000564117ENST00000565455ENST00000565883ENST00000566004ENST00000566131ENST00000566224ENST00000566273ENST00000567113ENST00000567329ENST00000567692ENST00000569230ENST00000569448ENST00000570256ENSG00000260979ENST00000564485ENSG00000261481ENST00000570290CIL_0000EV_0002ENSMUSG00000008393ENSMUST00000008537ENSMUSG00000084737ENSMUST00000122788
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000EV_0001ENSG00000153048ENST00000311052ENST00000396593ENST00000561530ENST00000563815ENST00000567554ENST00000611932ENST00000614449ENST00000618335ENSG00000187555ENST00000344836ENST00000381886ENST00000542333ENST00000563961ENSG00000260979ENST00000564485ENSG00000261481ENST00000570290CIL_0000EV_0002ENSMUSG00000008393ENSMUST00000008537ENSMUSG00000084737ENSMUST00000122788
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153048 ENST00000311052 72.164±0.00 157.405±0.00 N/A N/A 95.271±0.00 98.301±0.00 4.279±0.00 127.393±0.00 N/A 86.330±0.00 N/A 51.379±0.00 115.101±19.74 78.171±0.00
ENST00000396593 8.659±0.00 N/A N/A N/A N/A N/A 0.976±0.00 N/A 2.595±0.00 15.644±0.00 1.804±0.00 7.983±0.00 11.494±0.00 N/A
ENST00000561530 N/A N/A N/A N/A N/A N/A N/A N/A N/A 106.632±0.00 N/A N/A N/A N/A
ENST00000562586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A
ENST00000565287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567554 N/A N/A N/A N/A N/A N/A N/A N/A 17.581±0.00 N/A 1.451±0.00 71.388±0.00 95.509±0.00 125.107±47.65
ENST00000567626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611932 N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.611±0.00 N/A N/A N/A N/A
ENST00000614449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.419±0.00
ENST00000618335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.963±0.00 N/A N/A
ENST00000619881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187555 ENST00000344836 4.192±0.00 6.097±0.00 1.943±0.00 4.554±2.46 3.667±0.61 5.204±0.00 2.367±0.00 2.761±0.00 3.880±2.50 1.946±0.46 2.973±1.36 6.862±3.36 4.385±0.88 4.602±0.00
ENST00000381886 8.910±0.00 5.608±0.00 0.984±0.00 5.179±2.83 5.476±1.44 6.608±0.00 6.526±0.00 2.853±1.09 4.031±0.00 2.920±0.00 9.959±0.00 5.589±0.81 4.227±0.46 20.181±3.21
ENST00000542333 N/A N/A N/A N/A 3.864±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 46.491±0.00
ENST00000562051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563961 10.338±0.00 10.881±0.00 1.038±0.00 12.672±0.00 5.885±3.53 8.446±3.05 4.310±3.19 10.911±0.00 6.285±0.00 5.719±0.00 7.927±5.26 12.425±7.55 12.831±8.34 30.549±12.53
ENST00000564117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260979 ENST00000564485 N/A 1.810±0.00 0.177±0.00 0.072±0.00 0.135±0.00 0.146±0.00 N/A N/A N/A 0.334±0.00 N/A 0.275±0.00 0.285±0.12 0.290±0.00
ENSG00000261481 ENST00000570290 0.324±0.00 3.453±0.00 N/A N/A 0.242±0.00 0.364±0.00 N/A N/A 6.487±0.00 N/A 0.063±0.00 N/A N/A 0.400±0.27
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008393 ENSMUST00000008537 70.480±14.62 243.030±54.35 23.891±1.86 44.877±27.14 67.910±13.29 108.950±4.85 11.398±1.93 29.005±1.74 56.863±19.83 60.179±8.78 2.935±0.75 142.124±49.72 28.830±8.91 25.155±13.14
ENSMUSG00000084737 ENSMUST00000122788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 178.714±103.95 14.004±0.00

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