C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000F1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074356-ENSDARG00000006508 CGP 7955 8:11367222-11472661
GeneTranscriptPositionBiotype
ENSDARG00000006508 (pip5k1bb)
phosphatidylinositol-4-phosphate 5-kinase, type I, beta b 		ENSDART00000008215 (pip5k1bb-001) 11382686-11472661 protein_coding
ENSDARG00000074356 (fxn)
frataxin 		ENSDART00000142577 (fxn-001) 11367222-11381519 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000F1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059363-ENSMUSG00000024867 CGP 10090 19:24261453-24555872
GeneTranscriptPositionBiotype
ENSMUSG00000024867 (Pip5k1b)
phosphatidylinositol-4-phosphate 5-kinase, type 1 beta 		ENSMUST00000025800 (Pip5k1b-001) 24294794-24555872 protein_coding
ENSMUST00000112673 (Pip5k1b-002) 24294794-24555842 protein_coding
ENSMUST00000134360 (Pip5k1b-005) 24295397-24317342 processed_transcript
ENSMUST00000145829 (Pip5k1b-004) 24435386-24555789 processed_transcript
ENSMUST00000156814 (Pip5k1b-003) 24396161-24555838 retained_intron
ENSMUSG00000059363 (Fxn)
frataxin 		ENSMUST00000081333 (Fxn-001) 24261453-24280605 protein_coding
ENSMUST00000123684 (Fxn-002) 24261501-24280568 nonsense_mediated_decay
ENSMUST00000132688 (Fxn-003) 24261862-24278171 retained_intron
ENSMUSG00000074922 (Fam122a)
family with sequence similarity 122, member A 		ENSMUST00000099556 (Fam122a-201) 24476502-24477356 protein_coding
ENSMUSG00000082107 (Gm16216)
predicted gene 16216 		ENSMUST00000118970 (Gm16216-001) 24289716-24290826 processed_pseudogene
ENSMUSG00000085003 (Pip5k1bos)
phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, opposite strand 		ENSMUST00000126936 (Pip5k1bos-001) 24416009-24430329 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000F1_0001ENSDARG00000006508ENSDART00000008215ENSDARG00000074356ENSDART00000142577CIL_0000F1_0002ENSMUSG00000024867ENSMUST00000025800ENSMUST00000112673ENSMUST00000134360ENSMUST00000145829ENSMUST00000156814ENSMUSG00000059363ENSMUST00000081333ENSMUST00000123684ENSMUST00000132688ENSMUSG00000074922ENSMUST00000099556ENSMUSG00000082107ENSMUST00000118970ENSMUSG00000085003ENSMUST00000126936
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000F1_0001ENSDARG00000006508ENSDART00000008215ENSDARG00000074356ENSDART00000142577CIL_0000F1_0002ENSMUSG00000024867ENSMUST00000025800ENSMUST00000112673ENSMUST00000134360ENSMUSG00000059363ENSMUST00000081333ENSMUST00000123684ENSMUST00000132688ENSMUSG00000074922ENSMUST00000099556ENSMUSG00000082107ENSMUST00000118970ENSMUSG00000085003ENSMUST00000126936
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006508 ENSDART00000008215 N/A N/A N/A 8.470±0.39 N/A N/A 8.618±10.70 3.398±2.30 0.211±0.00 N/A 1.396±0.00 N/A N/A N/A
ENSDARG00000074356 ENSDART00000142577 N/A N/A N/A 4.372±1.18 N/A N/A 2.040±0.72 3.224±0.59 0.224±0.00 N/A 0.938±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024867 ENSMUST00000025800 1.208±1.09 4.363±0.89 0.706±0.06 1.468±0.82 0.513±0.24 18.134±1.73 6.784±1.63 2.072±0.53 5.805±3.56 5.945±0.65 0.099±0.01 4.995±1.75 5.513±2.31 2.798±1.01
ENSMUST00000112673 0.113±0.00 N/A N/A 2.488±0.00 0.183±0.00 N/A N/A N/A 0.020±0.00 N/A 0.135±0.00 3.230±0.00 1.575±0.57 0.174±0.00
ENSMUST00000134360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.079±0.00
ENSMUST00000145829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000059363 ENSMUST00000081333 5.838±1.40 26.797±1.94 4.131±0.52 6.249±2.06 5.519±1.43 5.706±1.64 7.160±2.94 10.119±3.21 10.626±2.52 2.649±0.09 9.493±1.58 8.146±1.98 5.204±2.63 1.807±0.77
ENSMUST00000123684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.306±0.30 N/A
ENSMUST00000132688 N/A N/A N/A N/A 0.440±0.00 N/A N/A N/A N/A 0.458±0.07 N/A 0.817±0.19 N/A N/A
ENSMUSG00000074922 ENSMUST00000099556 14.160±0.37 37.962±7.64 8.512±0.00 4.341±1.01 16.028±6.41 12.202±1.03 11.098±1.24 15.253±1.41 10.271±3.57 15.307±2.34 6.999±0.75 18.870±6.66 7.934±4.24 9.501±3.05
ENSMUSG00000082107 ENSMUST00000118970 0.022±0.00 N/A 0.043±0.03 0.063±0.03 0.044±0.01 N/A N/A 0.021±0.00 0.113±0.15 0.027±0.00 0.026±0.00 0.056±0.01 0.040±0.02 0.014±0.00
ENSMUSG00000085003 ENSMUST00000126936 N/A 0.258±0.00 N/A N/A N/A 0.277±0.10 0.154±0.09 N/A 0.027±0.01 0.273±0.00 N/A 0.432±0.23 N/A 4.050±0.41

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