C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000FQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000088882-ENSG00000241690 CGP 9606 20:2794069-2818066
GeneTranscriptPositionBiotype
ENSG00000088882 (CPXM1)
carboxypeptidase X (M14 family), member 1 		ENST00000380605 (CPXM1-001) 2794069-2800637 protein_coding
ENSG00000198326 (TMEM239)
transmembrane protein 239 		ENST00000361033 (TMEM239-002) 2816302-2820284 protein_coding
ENST00000380585 (TMEM239-001) 2816333-2817031 protein_coding
ENSG00000241690 (TMEM239)
CDNA FLJ26142 fis, clone TST04526 {ECO:0000313|EMBL:BAC85208.1}; Transmembrane protein 239 {ECO:0000313|Ensembl:ENSP00000369967} 		ENST00000380593 (TMEM239-001) 2814968-2818066 protein_coding
ENSG00000258713 (C20orf141)
chromosome 20 open reading frame 141 		ENST00000380589 (C20orf141-001) 2815011-2815833 protein_coding
ENST00000603872 (C20orf141-002) 2814987-2815793 protein_coding
CIL_0000FQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027408-ENSMUSG00000100963 CGP 10090 2:130390775-130408256
GeneTranscriptPositionBiotype
ENSMUSG00000027408 (Cpxm1)
carboxypeptidase X 1 (M14 family) 		ENSMUST00000028897 (Cpxm1-001) 130390775-130397574 protein_coding
ENSMUST00000130533 (Cpxm1-002) 130390776-130393276 retained_intron
ENSMUSG00000027409 (1700020A23Rik)
RIKEN cDNA 1700020A23 gene 		ENSMUST00000028898 (1700020A23Rik-001) 130405286-130406074 protein_coding
ENSMUST00000110281 (1700020A23Rik-002) 130405259-130406070 protein_coding
ENSMUST00000189961 (1700020A23Rik-003) 130405265-130406018 protein_coding
ENSMUSG00000049692 (Tmem239)
transmembrane 239 		ENSMUST00000055421 (Tmem239-001) 130406478-130407902 protein_coding
ENSMUSG00000082985 (Gm14042)
predicted gene 14042 		ENSMUST00000120139 (Gm14042-001) 130400437-130401269 processed_pseudogene
ENSMUSG00000100963 (RP23-29K12.9)
predicted gene 28372 		ENSMUST00000188900 (RP23-29K12.9-001) 130405239-130408256 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FQ_0001ENSG00000088882ENST00000380605ENSG00000198326ENST00000361033ENST00000380585ENSG00000241690ENST00000380593ENSG00000258713ENST00000380589ENST00000603872CIL_0000FQ_0002ENSMUSG00000027408ENSMUST00000028897ENSMUST00000130533ENSMUSG00000027409ENSMUST00000028898ENSMUST00000110281ENSMUST00000189961ENSMUSG00000049692ENSMUST00000055421ENSMUSG00000082985ENSMUST00000120139ENSMUSG00000100963ENSMUST00000188900
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FQ_0001ENSG00000088882ENST00000380605ENSG00000198326ENST00000361033ENST00000380585ENSG00000241690ENST00000380593ENSG00000258713ENST00000380589ENST00000603872CIL_0000FQ_0002ENSMUSG00000027408ENSMUST00000028897ENSMUST00000130533ENSMUSG00000027409ENSMUST00000028898ENSMUST00000110281ENSMUST00000189961ENSMUSG00000049692ENSMUST00000055421ENSMUSG00000082985ENSMUST00000120139ENSMUSG00000100963ENSMUST00000188900
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088882 ENST00000380605 11.008±0.00 1.976±0.00 0.497±0.00 0.158±0.12 3.557±2.66 1.580±1.08 0.715±0.36 2.474±2.42 0.905±0.89 0.880±0.72 0.136±0.00 25.523±26.97 79.605±37.40 7.948±5.75
ENSG00000198326 ENST00000361033 0.014±0.00 N/A N/A N/A 0.026±0.00 0.036±0.00 N/A 0.021±0.00 0.011±0.00 N/A N/A 0.022±0.01 0.026±0.01 N/A
ENST00000380585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.780±10.28
ENSG00000241690 ENST00000380593 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 0.313±0.18 4.959±1.49
ENSG00000258713 ENST00000380589 N/A 0.290±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.343±0.12 18.455±0.46
ENST00000603872 0.090±0.00 N/A N/A N/A N/A 0.096±0.00 N/A 0.051±0.00 N/A N/A N/A N/A 0.880±0.04 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027408 ENSMUST00000028897 19.407±3.91 5.679±0.78 39.221±2.40 4.742±1.95 27.190±8.91 1.135±0.23 2.674±0.73 6.505±0.38 0.981±0.36 9.020±1.52 1.358±0.34 34.669±7.61 19.440±14.93 2.649±1.31
ENSMUST00000130533 N/A N/A N/A 1.820±0.00 N/A N/A N/A N/A N/A N/A 1.079±0.34 12.692±2.74 2.725±0.00 32.256±7.06
ENSMUSG00000027409 ENSMUST00000028898 0.045±0.00 N/A N/A N/A N/A N/A 0.068±0.02 0.130±0.00 0.032±0.00 N/A 0.122±0.01 0.504±0.29 0.052±0.02 43.995±21.08
ENSMUST00000110281 0.070±0.00 N/A N/A N/A 0.092±0.00 N/A 0.062±0.00 0.067±0.01 N/A 0.087±0.00 0.173±0.00 0.499±0.22 0.177±0.03 70.117±28.83
ENSMUST00000189961 N/A N/A N/A N/A 0.062±0.00 N/A N/A 0.061±0.00 N/A N/A N/A 0.797±0.09 N/A N/A
ENSMUSG00000049692 ENSMUST00000055421 0.072±0.04 0.143±0.06 0.073±0.00 N/A 0.091±0.03 0.036±0.00 0.045±0.03 0.032±0.01 0.012±0.01 0.100±0.00 0.125±0.03 0.152±0.10 0.038±0.01 85.342±40.42
ENSMUSG00000082985 ENSMUST00000120139 0.379±0.14 0.315±0.20 0.367±0.01 1.057±0.17 0.227±0.07 0.104±0.00 0.210±0.08 0.077±0.02 0.050±0.02 0.163±0.05 0.206±0.07 0.307±0.10 0.115±0.02 0.200±0.06
ENSMUSG00000100963 ENSMUST00000188900 N/A 0.094±0.00 N/A 0.281±0.00 N/A N/A 0.024±0.01 N/A 0.030±0.02 N/A 0.092±0.03 0.146±0.06 0.040±0.01 N/A

Loading