C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000G2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068653-ENSDARG00000060723 CGP 7955 15:36900375-36996146
GeneTranscriptPositionBiotype
ENSDARG00000060723 (stim1a)
stromal interaction molecule 1a 		ENSDART00000085865 (stim1a-201) 36922032-36996146 protein_coding
ENSDART00000122134 (stim1a-001) 36919607-36996144 protein_coding
ENSDARG00000068653 (rhoga)
ras homolog gene family, member Ga 		ENSDART00000099388 (rhoga-201) 36900440-36901015 protein_coding
ENSDART00000152363 (rhoga-001) 36900375-36916731 protein_coding
CIL_0000G2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177105-ENSG00000167323 CGP 9606 11:3826978-4093210
GeneTranscriptPositionBiotype
ENSG00000167323 (STIM1)
stromal interaction molecule 1 		ENST00000300737 (STIM1-001) 3855702-4093209 protein_coding
ENST00000524822 (STIM1-017) 3888087-4023987 protein_coding
ENST00000525055 (STIM1-007) 3903463-4055610 protein_coding
ENST00000525403 (STIM1-004) 3854527-4059337 protein_coding
ENST00000526156 (STIM1-011) 4086205-4091966 retained_intron
ENST00000526596 (STIM1-010) 4074519-4091669 protein_coding
ENST00000526771 (STIM1-019) 3989162-4070064 processed_transcript
ENST00000527484 (STIM1-020) 3999602-4070069 processed_transcript
ENST00000527651 (STIM1-002) 3856182-4091798 protein_coding
ENST00000528656 (STIM1-016) 3903463-4059356 protein_coding
ENST00000530554 (STIM1-018) 3868048-4055604 protein_coding
ENST00000531332 (STIM1-009) 4083157-4091433 retained_intron
ENST00000532610 (STIM1-015) 3867103-4059403 protein_coding
ENST00000532919 (STIM1-005) 3867307-4070052 protein_coding
ENST00000532990 (STIM1-006) 3947343-4055565 protein_coding
ENST00000533343 (STIM1-008) 4082205-4083654 retained_intron
ENST00000533445 (STIM1-014) 4055523-4082221 processed_transcript
ENST00000533977 (STIM1-003) 4058749-4092126 protein_coding
ENST00000534707 (STIM1-013) 4088573-4089085 processed_transcript
ENST00000616714 (STIM1-201) 3855703-4093210 protein_coding
ENSG00000177105 (RHOG)
ras homolog family member G 		ENST00000351018 (RHOG-001) 3826978-3840983 protein_coding
ENST00000396978 (RHOG-002) 3827416-3840842 protein_coding
ENST00000396979 (RHOG-003) 3826982-3837867 protein_coding
ENST00000533217 (RHOG-004) 3827445-3830651 protein_coding
ENSG00000206976 (SNORA7)
Small nucleolar RNA SNORA7 		ENST00000384249 (SNORA7.1-204) 3922567-3922703 snoRNA
ENSG00000230593 (AC090804.1)
 ENST00000448870 (AC090804.1-001) 3892398-3892887 processed_pseudogene
ENSG00000240385 (RPS29P20)
ribosomal protein S29 pseudogene 20 		ENST00000489592 (RPS29P20-001) 4018948-4019118 processed_pseudogene
ENSG00000255141 (HNRNPA1P76)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 76 		ENST00000529475 (HNRNPA1P76-001) 3972881-3974237 processed_pseudogene
ENSG00000255232 (RP11-438N5.4)
 ENST00000529141 (RP11-438N5.4-001) 3961277-3961538 processed_pseudogene
CIL_0000G2_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073982-ENSMUSG00000030987 CGP 10090 7:102239123-102436848
GeneTranscriptPositionBiotype
ENSMUSG00000030987 (Stim1)
stromal interaction molecule 1 		ENSMUST00000033289 (Stim1-201) 102267824-102436848 protein_coding
ENSMUSG00000073982 (Rhog)
ras homolog gene family, member G 		ENSMUST00000098230 (Rhog-001) 102239123-102250123 protein_coding
ENSMUST00000106923 (Rhog-002) 102239123-102250088 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000G2_0001ENSDARG00000060723ENSDART00000085865ENSDART00000122134ENSDARG00000068653ENSDART00000099388ENSDART00000152363CIL_0000G2_0002ENSG00000167323ENST00000300737ENST00000524822ENST00000525055ENST00000525403ENST00000526156ENST00000526596ENST00000526771ENST00000527484ENST00000527651ENST00000528656ENST00000530554ENST00000531332ENST00000532610ENST00000532919ENST00000532990ENST00000533343ENST00000533445ENST00000533977ENST00000534707ENST00000616714ENSG00000177105ENST00000351018ENST00000396978ENST00000396979ENST00000533217ENSG00000206976ENST00000384249ENSG00000230593ENST00000448870ENSG00000240385ENST00000489592ENSG00000255141ENST00000529475ENSG00000255232ENST00000529141CIL_0000G2_0003ENSMUSG00000030987ENSMUST00000033289ENSMUSG00000073982ENSMUST00000098230ENSMUST00000106923
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000G2_0001ENSDARG00000060723ENSDART00000085865ENSDART00000122134ENSDARG00000068653ENSDART00000099388ENSDART00000152363CIL_0000G2_0002ENSG00000167323ENST00000300737ENST00000526156ENST00000526596ENST00000526771ENST00000527651ENST00000616714ENSG00000177105ENST00000351018ENST00000396978ENST00000533217ENSG00000206976ENST00000384249ENSG00000230593ENST00000448870ENSG00000240385ENST00000489592ENSG00000255141ENST00000529475ENSG00000255232ENST00000529141CIL_0000G2_0003ENSMUSG00000030987ENSMUST00000033289ENSMUSG00000073982ENSMUST00000098230
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060723 ENSDART00000085865 N/A N/A N/A 13.080±2.67 N/A N/A 2.185±0.00 8.140±0.30 N/A N/A N/A N/A N/A N/A
ENSDART00000122134 N/A N/A N/A 22.285±1.83 N/A N/A 2.931±0.30 6.646±0.00 2.699±0.00 N/A 4.992±0.00 N/A N/A N/A
ENSDARG00000068653 ENSDART00000099388 N/A N/A N/A 1.238±0.00 N/A N/A N/A 1.230±0.00 N/A N/A 0.467±0.00 N/A N/A N/A
ENSDART00000152363 N/A N/A N/A 0.781±0.18 N/A N/A 0.733±0.43 0.654±0.00 0.159±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167323 ENST00000300737 7.928±0.00 13.025±0.00 N/A 13.532±0.00 10.952±8.55 7.118±1.42 2.600±1.99 5.215±1.87 6.087±3.02 12.947±0.00 20.396±17.74 12.110±6.21 12.156±2.47 11.541±0.81
ENST00000524822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526156 N/A N/A 1.403±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526596 9.716±0.00 12.014±0.00 0.912±0.00 13.472±0.00 21.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.783±0.00 25.996±0.00
ENST00000527484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527651 N/A N/A N/A N/A 1.552±0.00 N/A 0.319±0.00 4.444±0.00 N/A 1.728±0.00 3.057±0.00 2.686±0.00 N/A N/A
ENST00000528656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616714 N/A N/A N/A 2.178±0.00 N/A N/A N/A N/A 1.303±0.00 1.106±0.00 9.557±4.64 N/A N/A N/A
ENSG00000177105 ENST00000351018 41.933±0.00 65.532±0.00 0.709±0.00 19.346±17.12 13.550±11.56 11.494±10.75 7.442±7.28 11.960±10.50 7.681±6.73 54.270±52.84 42.375±0.00 22.821±16.09 66.711±26.29 13.954±8.46
ENST00000396978 N/A N/A N/A 0.355±0.00 N/A N/A 0.222±0.00 N/A N/A 1.656±0.00 N/A N/A N/A N/A
ENST00000396979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.620±0.00 1.233±0.90 N/A N/A
ENSG00000206976 ENST00000384249 N/A 1.019±0.00 N/A N/A 1.070±0.00 2.863±0.00 N/A N/A 20.041±0.00 N/A N/A N/A N/A N/A
ENSG00000230593 ENST00000448870 0.210±0.00 0.725±0.00 N/A 0.101±0.00 0.264±0.23 0.512±0.39 0.192±0.16 0.063±0.00 0.285±0.00 1.084±0.00 2.542±0.00 0.487±0.41 0.068±0.00 0.163±0.10
ENSG00000240385 ENST00000489592 N/A N/A N/A N/A 0.228±0.00 N/A N/A 0.445±0.00 N/A N/A N/A N/A N/A 0.398±0.00
ENSG00000255141 ENST00000529475 0.062±0.00 0.114±0.00 0.451±0.00 0.036±0.00 N/A 0.316±0.27 N/A 0.592±0.00 N/A N/A 0.385±0.00 0.121±0.11 N/A 0.048±0.00
ENSG00000255232 ENST00000529141 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.658±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030987 ENSMUST00000033289 16.259±5.41 25.118±3.24 31.959±0.39 8.224±4.03 30.112±7.93 59.135±4.06 4.260±1.78 7.297±1.08 8.962±2.47 22.942±2.74 48.126±5.19 17.128±6.69 20.461±14.90 37.719±9.65
ENSMUSG00000073982 ENSMUST00000098230 38.043±6.89 29.517±1.09 22.559±0.27 4.028±1.83 46.926±12.57 37.410±3.36 10.431±3.51 18.849±2.16 19.407±9.49 47.518±3.66 6.039±0.98 34.021±9.04 23.634±10.73 5.660±0.58
ENSMUST00000106923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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