C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000GB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016143-ENSDARG00000053668 CGP 7955 14:29493295-29545834
GeneTranscriptPositionBiotype
ENSDARG00000016143 (xiap)
X-linked inhibitor of apoptosis 		ENSDART00000017075 (xiap-001) 29493295-29503541 protein_coding
ENSDART00000157306 (xiap-201) 29493295-29503450 protein_coding
ENSDARG00000053668 (stag2b)
stromal antigen 2b 		ENSDART00000088094 (stag2b-201) 29513130-29545834 protein_coding
CIL_0000GB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101966-ENSG00000101972 CGP 9606 X:123859724-124422664
GeneTranscriptPositionBiotype
ENSG00000009694 (TENM1)
teneurin transmembrane protein 1 		ENST00000371130 (TENM1-001) 124375903-124963817 protein_coding
ENST00000422452 (TENM1-201) 124375908-124963817 protein_coding
ENST00000461429 (TENM1-002) 124453459-124497143 processed_transcript
ENSG00000101966 (XIAP)
X-linked inhibitor of apoptosis 		ENST00000355640 (XIAP-009) 123860272-123913965 protein_coding
ENST00000371199 (XIAP-002) 123860027-123913979 protein_coding
ENST00000422098 (XIAP-007) 123859724-123885711 protein_coding
ENST00000430625 (XIAP-005) 123859878-123886130 protein_coding
ENST00000434753 (XIAP-201) 123859812-123913976 protein_coding
ENST00000468503 (XIAP-010) 123860454-123888683 processed_transcript
ENST00000468691 (XIAP-001) 123859877-123907251 processed_transcript
ENST00000481776 (XIAP-003) 123859764-123907020 processed_transcript
ENST00000496602 (XIAP-006) 123912760-123913615 processed_transcript
ENST00000497640 (XIAP-004) 123860195-123906998 processed_transcript
ENST00000497906 (XIAP-008) 123859827-123900566 processed_transcript
ENSG00000183918 (SH2D1A)
SH2 domain containing 1A 		ENST00000360027 (SH2D1A-006) 124346525-124371488 protein_coding
ENST00000371139 (SH2D1A-002) 124346344-124373155 protein_coding
ENST00000477673 (SH2D1A-005) 124346589-124371488 protein_coding
ENST00000491950 (SH2D1A-003) 124346589-124371488 processed_transcript
ENST00000494073 (SH2D1A-004) 124346589-124371488 processed_transcript
ENSG00000226532 (RP5-1052M9.1)
 ENST00000412004 (RP5-1052M9.1-001) 124326175-124326258 processed_pseudogene
ENSG00000229825 (RP5-1052M9.4)
 ENST00000418891 (RP5-1052M9.4-001) 124332918-124333376 processed_pseudogene
ENSG00000232054 (NPM1P34)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 34 		ENST00000428821 (NPM1P34-001) 124280530-124281422 processed_pseudogene
ENSG00000234564 (HSPA8P20)
heat shock 70kDa protein 8 pseudogene 20 		ENST00000448737 (HSPA8P20-001) 124204499-124205806 processed_pseudogene
ENSG00000237025 (RP1-315G1.1)
 ENST00000438019 (RP1-315G1.1-001) 123878590-123879296 processed_pseudogene
ENSG00000237331 (XIAP-AS1)
XIAP antisense RNA 1 		ENST00000458331 (XIAP-AS1-001) 123872626-123873932 antisense
ENSG00000237426 (ZIK1P1)
zinc finger protein interacting with K protein 1 pseudogene 1 		ENST00000456074 (ZIK1P1-001) 124173001-124174459 processed_pseudogene
ENSG00000252627 (RNU6-122P)
RNA, U6 small nuclear 122, pseudogene 		ENST00000516818 (RNU6-122P-201) 123874459-123874565 snRNA
CIL_0000GB_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025860-ENSMUSG00000025862 CGP 10090 X:42059679-42277185
GeneTranscriptPositionBiotype
ENSMUSG00000025860 (Xiap)
X-linked inhibitor of apoptosis 		ENSMUST00000026978 (Xiap-002) 42093728-42109656 protein_coding
ENSMUST00000055483 (Xiap-001) 42071325-42109656 protein_coding
ENSMUST00000115094 (Xiap-003) 42067836-42109656 protein_coding
ENSMUST00000115095 (Xiap-004) 42068398-42109656 protein_coding
ENSMUST00000126375 (Xiap-007) 42067881-42094556 protein_coding
ENSMUST00000141316 (Xiap-006) 42059679-42072637 processed_transcript
ENSMUST00000145065 (Xiap-005) 42068755-42109656 processed_transcript
ENSMUST00000146874 (Xiap-008) 42068410-42072637 processed_transcript
ENSMUST00000150635 (Xiap-009) 42067918-42104819 processed_transcript
ENSMUSG00000025862 (Stag2)
stromal antigen 2 		ENSMUST00000069619 (Stag2-001) 42150701-42277185 protein_coding
ENSMUST00000115072 (Stag2-201) 42149412-42277175 protein_coding
ENSMUST00000115073 (Stag2-002) 42149317-42277185 protein_coding
ENSMUST00000123245 (Stag2-007) 42151014-42206124 protein_coding
ENSMUST00000127618 (Stag2-006) 42149683-42206121 protein_coding
ENSMUST00000128799 (Stag2-005) 42152180-42221029 protein_coding
ENSMUST00000136323 (Stag2-003) 42149541-42212680 retained_intron
ENSMUST00000141414 (Stag2-004) 42150154-42211419 processed_transcript
ENSMUSG00000082324 (Gm14615)
predicted gene 14615 		ENSMUST00000117575 (Gm14615-001) 42128195-42130723 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GB_0001ENSDARG00000016143ENSDART00000017075ENSDART00000157306ENSDARG00000053668ENSDART00000088094CIL_0000GB_0002ENSG00000009694ENST00000371130ENST00000422452ENST00000461429ENSG00000101966ENST00000355640ENST00000371199ENST00000422098ENST00000430625ENST00000434753ENST00000468503ENST00000468691ENST00000481776ENST00000496602ENST00000497640ENST00000497906ENSG00000183918ENST00000360027ENST00000371139ENST00000477673ENST00000491950ENST00000494073ENSG00000226532ENST00000412004ENSG00000229825ENST00000418891ENSG00000232054ENST00000428821ENSG00000234564ENST00000448737ENSG00000237025ENST00000438019ENSG00000237331ENST00000458331ENSG00000237426ENST00000456074ENSG00000252627ENST00000516818CIL_0000GB_0003ENSMUSG00000025860ENSMUST00000026978ENSMUST00000055483ENSMUST00000115094ENSMUST00000115095ENSMUST00000126375ENSMUST00000141316ENSMUST00000145065ENSMUST00000146874ENSMUST00000150635ENSMUSG00000025862ENSMUST00000069619ENSMUST00000115072ENSMUST00000115073ENSMUST00000123245ENSMUST00000127618ENSMUST00000128799ENSMUST00000136323ENSMUST00000141414ENSMUSG00000082324ENSMUST00000117575
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GB_0001ENSDARG00000016143ENSDART00000017075ENSDART00000157306ENSDARG00000053668ENSDART00000088094CIL_0000GB_0002ENSG00000009694ENST00000371130ENST00000422452ENSG00000101966ENST00000355640ENST00000371199ENST00000430625ENST00000434753ENSG00000183918ENST00000360027ENST00000371139ENST00000494073ENSG00000226532ENST00000412004ENSG00000229825ENST00000418891ENSG00000232054ENST00000428821ENSG00000234564ENST00000448737ENSG00000237025ENST00000438019ENSG00000237331ENST00000458331ENSG00000237426ENST00000456074ENSG00000252627ENST00000516818CIL_0000GB_0003ENSMUSG00000025860ENSMUST00000026978ENSMUST00000055483ENSMUST00000115094ENSMUST00000115095ENSMUST00000126375ENSMUST00000145065ENSMUSG00000025862ENSMUST00000069619ENSMUST00000115072ENSMUST00000115073ENSMUSG00000082324ENSMUST00000117575
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016143 ENSDART00000017075 N/A N/A N/A 1.544±0.21 N/A N/A 10.840±0.00 5.195±3.63 0.591±0.00 N/A N/A N/A N/A N/A
ENSDART00000157306 N/A N/A N/A 6.436±3.49 N/A N/A 18.781±5.83 9.897±1.52 1.030±0.00 N/A 9.304±0.00 N/A N/A N/A
ENSDARG00000053668 ENSDART00000088094 N/A N/A N/A 6.084±0.00 N/A N/A 2.157±0.33 5.113±0.00 0.614±0.00 N/A 1.659±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000009694 ENST00000371130 N/A N/A 1.261±0.00 N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A
ENST00000422452 N/A N/A N/A 0.926±0.00 N/A N/A N/A 2.973±0.00 N/A N/A N/A N/A N/A N/A
ENST00000461429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101966 ENST00000355640 N/A N/A 0.442±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.166±0.00 N/A 0.812±0.00
ENST00000371199 4.631±0.00 2.819±0.00 2.512±0.00 3.075±1.25 2.934±1.16 1.691±0.51 2.111±0.00 1.299±0.21 2.907±0.00 2.790±0.54 0.780±0.00 1.935±0.81 1.193±0.19 1.004±0.33
ENST00000422098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430625 N/A N/A N/A N/A N/A N/A N/A 7.236±0.00 N/A N/A N/A N/A N/A N/A
ENST00000434753 0.790±0.00 N/A N/A 1.246±0.00 N/A 0.506±0.00 0.854±0.23 1.325±0.46 1.247±0.00 1.129±0.00 2.408±0.00 1.821±0.66 0.667±0.00 1.623±0.00
ENST00000468503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183918 ENST00000360027 N/A N/A N/A 0.066±0.00 2.354±0.00 1.290±0.00 0.056±0.00 0.126±0.00 0.195±0.00 2.115±0.00 N/A N/A N/A 0.087±0.00
ENST00000371139 N/A 0.639±0.00 0.062±0.00 0.053±0.03 N/A N/A 0.021±0.00 N/A 0.134±0.00 1.043±0.30 0.035±0.00 0.118±0.01 0.086±0.01 0.175±0.00
ENST00000477673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494073 N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A 0.269±0.00 N/A
ENSG00000226532 ENST00000412004 N/A 0.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.049±0.00 N/A N/A
ENSG00000229825 ENST00000418891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.226±0.18
ENSG00000232054 ENST00000428821 0.048±0.00 0.025±0.00 N/A N/A 0.036±0.00 0.077±0.07 0.011±0.00 0.025±0.00 N/A N/A 0.011±0.00 0.026±0.01 N/A 0.011±0.00
ENSG00000234564 ENST00000448737 N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.010±0.00 N/A N/A N/A
ENSG00000237025 ENST00000438019 0.081±0.00 0.378±0.00 N/A 0.099±0.00 0.335±0.24 0.121±0.00 0.257±0.00 N/A N/A 0.141±0.00 N/A 0.128±0.08 0.039±0.00 0.039±0.00
ENSG00000237331 ENST00000458331 0.092±0.00 0.914±0.00 0.103±0.00 0.382±0.00 0.127±0.03 0.236±0.15 0.340±0.05 0.033±0.00 0.205±0.00 0.597±0.28 N/A 0.913±0.67 0.053±0.00 0.088±0.00
ENSG00000237426 ENST00000456074 0.010±0.00 0.121±0.00 N/A 0.011±0.00 0.020±0.00 0.075±0.00 0.009±0.00 0.030±0.00 0.009±0.00 N/A 0.079±0.00 0.016±0.01 0.021±0.00 0.125±0.01
ENSG00000252627 ENST00000516818 0.907±0.00 0.365±0.00 N/A N/A N/A N/A 0.174±0.00 N/A 0.824±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025860 ENSMUST00000026978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 1.488±0.00 N/A N/A
ENSMUST00000055483 3.380±0.29 N/A N/A N/A N/A 2.362±0.28 0.651±0.00 1.195±0.02 3.056±1.08 4.473±0.00 N/A 3.997±1.08 2.407±0.20 N/A
ENSMUST00000115094 2.105±1.30 2.120±0.26 N/A 2.997±0.16 2.021±1.40 2.246±0.89 1.701±0.55 2.227±1.02 1.802±0.39 4.257±1.42 1.442±0.36 2.164±0.81 2.548±0.47 0.198±0.10
ENSMUST00000115095 1.074±0.22 1.129±0.24 2.007±0.04 2.059±0.20 N/A N/A 0.993±0.23 1.306±0.07 2.797±0.57 2.369±0.35 1.095±0.39 2.815±1.22 1.615±0.59 0.210±0.10
ENSMUST00000126375 N/A 4.409±1.38 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145065 4.828±0.76 1.346±0.00 7.235±0.00 6.483±1.02 2.344±0.91 2.576±0.15 1.149±0.48 2.441±0.95 5.037±3.60 7.244±1.65 1.233±0.37 4.421±1.86 5.357±2.34 0.553±0.25
ENSMUST00000146874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025862 ENSMUST00000069619 5.042±0.73 3.241±1.13 7.329±1.92 5.015±3.12 4.712±1.37 2.865±0.78 1.196±0.61 2.840±0.84 7.990±4.86 7.892±1.13 5.973±0.46 6.244±2.22 4.496±0.80 1.244±0.59
ENSMUST00000115072 2.206±0.00 N/A N/A 3.542±0.00 1.473±0.00 0.625±0.00 0.583±0.00 0.952±0.29 N/A 2.247±0.00 N/A 2.890±1.43 0.989±0.10 0.721±0.00
ENSMUST00000115073 0.861±0.00 0.749±0.00 2.404±0.79 3.727±0.11 1.331±0.00 0.833±0.00 N/A N/A 4.019±1.12 N/A 1.625±0.26 2.007±1.16 1.781±0.00 1.038±0.15
ENSMUST00000123245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082324 ENSMUST00000117575 N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A

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