C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000GR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005479-ENSDARG00000036990 CGP 7955 1:39750404-40221985
GeneTranscriptPositionBiotype
ENSDARG00000005479 (tenm3)
teneurin transmembrane protein 3 		ENSDART00000005592 (tenm3-201) 39960337-40139975 protein_coding
ENSDART00000084891 (tenm3-005) 39750404-39854301 protein_coding
ENSDART00000122700 (tenm3-202) 39845116-40140106 protein_coding
ENSDART00000132970 (tenm3-002) 40056922-40060019 processed_transcript
ENSDART00000137676 (tenm3-001) 39915568-40142441 protein_coding
ENSDART00000144455 (tenm3-003) 40063087-40075922 processed_transcript
ENSDART00000148701 (tenm3-004) 39750404-40139247 protein_coding
ENSDARG00000036990 (dctd)
dCMP deaminase 		ENSDART00000053763 (dctd-201) 40175765-40221985 protein_coding
ENSDARG00000085080 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120480 (5S_rRNA.989-201) 39972361-39972478 rRNA
ENSDARG00000093919 (si:ch211-42a2.2)
si:ch211-42a2.2 		ENSDART00000138659 (si:ch211-42a2.2-001) 40038234-40040448 processed_transcript
CIL_0000GR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000218336-ENSG00000129187 CGP 9606 4:182143987-182917936
GeneTranscriptPositionBiotype
ENSG00000129187 (DCTD)
dCMP deaminase 		ENST00000357067 (DCTD-001) 182890104-182917379 protein_coding
ENST00000438320 (DCTD-002) 182890255-182917594 protein_coding
ENST00000500813 (DCTD-004) 182890060-182917369 nonsense_mediated_decay
ENST00000503182 (DCTD-006) 182891429-182917936 protein_coding
ENST00000503820 (DCTD-014) 182914946-182917219 protein_coding
ENST00000503988 (DCTD-013) 182914990-182917253 protein_coding
ENST00000507543 (DCTD-005) 182890255-182917361 nonsense_mediated_decay
ENST00000507631 (DCTD-003) 182891014-182917396 nonsense_mediated_decay
ENST00000508994 (DCTD-008) 182915498-182917443 protein_coding
ENST00000509218 (DCTD-010) 182914988-182917378 nonsense_mediated_decay
ENST00000509757 (DCTD-011) 182914983-182917377 nonsense_mediated_decay
ENST00000510307 (DCTD-015) 182894489-182916896 protein_coding
ENST00000510370 (DCTD-009) 182891372-182917389 protein_coding
ENST00000512766 (DCTD-007) 182894493-182917477 protein_coding
ENST00000513348 (DCTD-012) 182914923-182917345 nonsense_mediated_decay
ENST00000513383 (DCTD-017) 182911223-182915560 processed_transcript
ENST00000514754 (DCTD-016) 182894554-182916627 protein_coding
ENSG00000177822 (MGC45800)
 ENST00000315302 (MGC45800-001) 182141650-182144466 antisense
ENST00000505537 (MGC45800-004) 182079629-182085084 antisense
ENST00000505873 (MGC45800-008) 182142383-182143776 antisense
ENST00000507869 (MGC45800-003) 181975156-182085136 antisense
ENST00000508968 (MGC45800-005) 182143491-182145249 antisense
ENST00000509012 (MGC45800-002) 181874438-182144195 antisense
ENST00000511052 (MGC45800-007) 182143178-182143888 antisense
ENST00000513752 (MGC45800-006) 182141186-182144500 antisense
ENSG00000218336 (TENM3)
teneurin transmembrane protein 3 		ENST00000406950 (TENM3-201) 182600923-182803024 protein_coding
ENST00000502950 (TENM3-003) 182680324-182755353 processed_transcript
ENST00000507737 (TENM3-006) 182680372-182681916 retained_intron
ENST00000510504 (TENM3-005) 182448999-182628875 protein_coding
ENST00000511685 (TENM3-001) 182243429-182803024 protein_coding
ENST00000512480 (TENM3-004) 182144690-182346929 protein_coding
ENST00000513201 (TENM3-002) 182143987-182350316 processed_transcript
ENSG00000248816 (RP11-18D7.3)
 ENST00000509283 (RP11-18D7.3-001) 182697902-182708042 antisense
ENSG00000251714 (RN7SKP67)
RNA, 7SK small nuclear pseudogene 67 		ENST00000515905 (RN7SKP67-201) 182631454-182631688 misc_RNA
ENSG00000272646 (RP11-188P17.2)
 ENST00000608774 (RP11-188P17.2-001) 182881777-182882203 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GR_0001ENSDARG00000005479ENSDART00000005592ENSDART00000084891ENSDART00000122700ENSDART00000132970ENSDART00000137676ENSDART00000144455ENSDART00000148701ENSDARG00000036990ENSDART00000053763ENSDARG00000085080ENSDART00000120480ENSDARG00000093919ENSDART00000138659CIL_0000GR_0002ENSG00000129187ENST00000357067ENST00000438320ENST00000500813ENST00000503182ENST00000503820ENST00000503988ENST00000507543ENST00000507631ENST00000508994ENST00000509218ENST00000509757ENST00000510307ENST00000510370ENST00000512766ENST00000513348ENST00000513383ENST00000514754ENSG00000177822ENST00000315302ENST00000505537ENST00000505873ENST00000507869ENST00000508968ENST00000509012ENST00000511052ENST00000513752ENSG00000218336ENST00000406950ENST00000502950ENST00000507737ENST00000510504ENST00000511685ENST00000512480ENST00000513201ENSG00000248816ENST00000509283ENSG00000251714ENST00000515905ENSG00000272646ENST00000608774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GR_0001ENSDARG00000005479ENSDART00000005592ENSDART00000122700ENSDART00000137676ENSDARG00000036990ENSDART00000053763ENSDARG00000085080ENSDART00000120480ENSDARG00000093919ENSDART00000138659CIL_0000GR_0002ENSG00000129187ENST00000357067ENST00000438320ENST00000500813ENST00000503182ENST00000507543ENST00000510307ENST00000510370ENSG00000177822ENST00000315302ENSG00000218336ENST00000406950ENST00000502950ENST00000511685ENSG00000248816ENST00000509283ENSG00000251714ENST00000515905ENSG00000272646ENST00000608774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005479 ENSDART00000005592 N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000084891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000122700 N/A N/A N/A N/A N/A N/A 0.190±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137676 N/A N/A N/A 9.676±5.36 N/A N/A 2.220±1.11 0.576±0.30 0.013±0.00 N/A N/A N/A N/A N/A
ENSDART00000144455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000036990 ENSDART00000053763 N/A N/A N/A 0.712±0.30 N/A N/A 0.686±0.17 4.941±1.12 0.196±0.00 N/A 0.349±0.00 N/A N/A N/A
ENSDARG00000085080 ENSDART00000120480 N/A N/A N/A 339.679±0.00 N/A N/A N/A 92.531±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000093919 ENSDART00000138659 N/A N/A N/A 0.482±0.00 N/A N/A 0.520±0.19 0.413±0.00 N/A N/A 0.401±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129187 ENST00000357067 8.684±0.00 11.342±0.00 1.710±0.00 5.124±0.41 5.972±1.12 4.552±1.14 3.741±2.40 7.428±1.60 5.587±2.14 6.003±1.21 2.909±0.25 17.409±6.54 14.110±5.80 4.215±1.97
ENST00000438320 16.323±0.00 14.807±0.00 N/A 12.924±0.00 9.670±7.08 13.675±0.00 7.030±0.00 10.718±8.92 7.922±4.83 14.763±0.00 6.407±0.00 12.272±5.38 8.365±1.26 6.416±1.69
ENST00000500813 N/A N/A N/A 2.763±0.00 N/A 6.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.168±0.00 N/A
ENST00000503820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507543 5.906±0.00 N/A 2.628±0.00 N/A N/A N/A N/A N/A N/A 2.677±0.00 N/A N/A N/A 8.232±0.00
ENST00000507631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.578±0.00
ENST00000510370 N/A N/A N/A N/A N/A N/A N/A N/A 2.447±0.00 N/A N/A N/A N/A N/A
ENST00000512766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177822 ENST00000315302 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.00 N/A N/A N/A N/A
ENST00000505537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218336 ENST00000406950 1.006±0.00 N/A N/A 0.812±0.08 2.421±0.00 0.875±0.51 0.165±0.12 0.266±0.24 0.430±0.00 0.110±0.03 0.855±0.00 0.638±0.00 1.921±1.16 0.700±0.00
ENST00000502950 N/A N/A 0.242±0.00 N/A 0.705±0.00 N/A 0.155±0.00 0.067±0.00 1.260±0.00 N/A 0.638±0.00 N/A N/A 1.897±1.28
ENST00000507737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511685 0.419±0.00 N/A N/A 1.695±0.00 N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 4.673±3.17 N/A
ENST00000512480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248816 ENST00000509283 N/A N/A N/A 0.229±0.00 1.233±0.00 0.023±0.00 0.133±0.00 N/A N/A N/A 0.581±0.00 N/A N/A 0.043±0.00
ENSG00000251714 ENST00000515905 N/A N/A N/A 0.530±0.00 N/A N/A N/A N/A 0.687±0.00 N/A N/A N/A N/A 0.227±0.00
ENSG00000272646 ENST00000608774 N/A N/A N/A 0.059±0.00 0.483±0.41 0.194±0.00 0.092±0.00 0.243±0.00 0.164±0.02 0.255±0.00 N/A 0.455±0.00 0.131±0.00 N/A

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