C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000IK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138286-ENSG00000213551 CGP 9606 10:73168166-73248862
GeneTranscriptPositionBiotype
ENSG00000122882 (ECD)
ecdysoneless homolog (Drosophila) 		ENST00000372979 (ECD-001) 73133656-73168059 protein_coding
ENST00000413026 (ECD-003) 73154310-73168078 protein_coding
ENST00000430082 (ECD-006) 73134583-73168064 protein_coding
ENST00000453402 (ECD-002) 73152346-73168095 protein_coding
ENST00000454759 (ECD-007) 73134524-73168071 protein_coding
ENST00000484976 (ECD-004) 73134524-73167948 nonsense_mediated_decay
ENST00000494307 (ECD-005) 73130155-73134754 protein_coding
ENST00000610256 (ECD-008) 73156589-73169055 processed_transcript
ENSG00000138286 (FAM149B1)
family with sequence similarity 149, member B1 		ENST00000242505 (FAM149B1-001) 73168166-73244504 protein_coding
ENST00000372955 (FAM149B1-003) 73177872-73235452 protein_coding
ENST00000445951 (FAM149B1-002) 73208692-73242180 protein_coding
ENST00000466261 (FAM149B1-005) 73230296-73235309 retained_intron
ENST00000468462 (FAM149B1-004) 73234108-73242181 retained_intron
ENST00000470798 (FAM149B1-007) 73228107-73235481 processed_transcript
ENST00000475829 (FAM149B1-006) 73210267-73235452 nonsense_mediated_decay
ENST00000607940 (FAM149B1-009) 73230473-73231306 processed_transcript
ENSG00000199201 (Y_RNA)
Y RNA 		ENST00000362331 (Y_RNA.1-203) 73192223-73192325 misc_RNA
ENSG00000213551 (DNAJC9)
DnaJ (Hsp40) homolog, subfamily C, member 9 		ENST00000372950 (DNAJC9-001) 73242824-73248862 protein_coding
ENST00000453189 (DNAJC9-004) 73238770-73243398 processed_transcript
ENST00000469143 (DNAJC9-002) 73183362-73245981 processed_transcript
ENST00000512551 (DNAJC9-003) 73247342-73248268 processed_transcript
ENSG00000227382 (EIF4A2P2)
eukaryotic translation initiation factor 4A2 pseudogene 2 		ENST00000455776 (EIF4A2P2-001) 73199826-73201225 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0000IK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039599-ENSMUSG00000021811 CGP 10090 14:20348162-20388910
GeneTranscriptPositionBiotype
ENSMUSG00000021811 (Dnajc9)
DnaJ (Hsp40) homolog, subfamily C, member 9 		ENSMUST00000022345 (Dnajc9-201) 20384638-20388910 protein_coding
ENSMUSG00000039599 (Fam149b)
family with sequence similarity 149, member B 		ENSMUST00000037698 (Fam149b-201) 20348162-20368563 protein_coding
ENSMUST00000051915 (Fam149b-202) 20348222-20383489 protein_coding
ENSMUST00000090499 (Fam149b-203) 20348162-20383489 protein_coding
ENSMUST00000090503 (Fam149b-204) 20348162-20383489 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IK_0001ENSG00000122882ENST00000372979ENST00000413026ENST00000430082ENST00000453402ENST00000454759ENST00000484976ENST00000494307ENST00000610256ENSG00000138286ENST00000242505ENST00000372955ENST00000445951ENST00000466261ENST00000468462ENST00000470798ENST00000475829ENST00000607940ENSG00000199201ENST00000362331ENSG00000213551ENST00000372950ENST00000453189ENST00000469143ENST00000512551ENSG00000227382ENST00000455776CIL_0000IK_0002ENSMUSG00000021811ENSMUST00000022345ENSMUSG00000039599ENSMUST00000037698ENSMUST00000051915ENSMUST00000090499ENSMUST00000090503
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IK_0001ENSG00000122882ENST00000372979ENST00000413026ENST00000430082ENST00000454759ENST00000484976ENSG00000138286ENST00000242505ENST00000445951ENST00000468462ENSG00000199201ENST00000362331ENSG00000213551ENST00000372950ENSG00000227382ENST00000455776CIL_0000IK_0002ENSMUSG00000021811ENSMUST00000022345ENSMUSG00000039599ENSMUST00000037698ENSMUST00000051915ENSMUST00000090499ENSMUST00000090503
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122882 ENST00000372979 1.667±0.00 2.789±0.00 1.268±0.00 3.429±0.92 2.025±0.66 0.997±0.09 0.892±0.29 1.181±0.82 1.345±0.02 0.851±0.20 1.581±0.50 2.281±0.39 2.016±0.45 1.183±0.00
ENST00000413026 N/A N/A N/A 3.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430082 2.622±0.00 3.117±0.00 N/A N/A 2.017±0.00 N/A 3.230±0.00 1.851±0.00 N/A 2.712±0.00 1.231±0.00 1.857±0.33 2.484±0.65 3.871±0.21
ENST00000453402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454759 2.508±0.00 2.567±0.00 1.529±0.00 2.647±0.69 3.534±1.31 3.388±0.91 2.014±0.00 2.596±0.93 1.768±0.88 1.592±0.20 1.768±1.08 2.183±1.13 2.255±0.76 7.007±0.00
ENST00000484976 N/A N/A N/A 3.126±0.00 N/A 2.115±0.00 N/A 2.174±0.00 1.786±0.00 1.864±0.00 N/A 7.375±5.60 6.292±3.89 9.535±4.22
ENST00000494307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138286 ENST00000242505 N/A N/A N/A 2.394±0.00 1.759±0.00 1.340±0.27 N/A N/A 1.872±0.00 N/A N/A 2.508±0.97 3.328±0.00 N/A
ENST00000372955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445951 N/A N/A N/A N/A N/A 3.510±0.00 N/A 5.723±1.75 4.168±0.00 7.878±0.00 N/A N/A 7.711±0.00 10.224±0.00
ENST00000466261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468462 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.169±0.00 N/A N/A N/A N/A
ENST00000470798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199201 ENST00000362331 N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213551 ENST00000372950 N/A 9.106±0.00 N/A 6.375±0.23 N/A 2.664±0.00 1.674±0.00 6.786±0.00 N/A N/A N/A 9.135±1.84 5.097±0.00 15.087±5.96
ENST00000453189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227382 ENST00000455776 N/A 0.214±0.00 0.095±0.00 0.062±0.00 0.136±0.00 0.159±0.11 0.019±0.00 0.040±0.00 0.458±0.00 0.504±0.47 0.063±0.00 0.160±0.06 0.080±0.01 0.047±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021811 ENSMUST00000022345 4.414±2.85 24.035±14.97 9.923±0.99 33.140±15.73 10.229±9.95 18.031±2.30 2.666±0.24 5.256±2.95 28.233±29.25 14.388±6.42 7.001±0.32 27.710±13.88 17.248±8.01 55.124±23.09
ENSMUSG00000039599 ENSMUST00000037698 2.665±0.59 N/A 5.204±0.84 6.363±3.30 3.822±0.90 2.276±0.34 1.759±0.36 3.221±0.42 2.436±1.40 2.174±0.39 1.296±0.23 4.886±2.38 4.987±2.06 N/A
ENSMUST00000051915 1.598±0.00 2.230±0.38 N/A 3.102±0.00 N/A 1.806±0.32 1.567±0.45 2.094±0.00 1.165±0.55 1.344±0.00 1.177±0.17 3.545±1.73 1.335±0.07 N/A
ENSMUST00000090499 6.480±1.39 2.275±1.51 6.907±1.31 3.289±0.31 2.944±1.04 2.808±1.07 3.010±0.87 4.078±1.68 1.905±0.79 2.259±1.22 2.534±0.41 5.863±1.73 2.952±0.80 11.180±3.79
ENSMUST00000090503 4.053±0.59 3.537±1.57 N/A 4.526±0.50 6.963±3.31 2.395±0.56 2.592±0.73 6.305±1.69 2.235±1.05 3.510±0.87 1.630±0.59 N/A 0.804±0.00 3.986±0.96

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