C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034203-ENSDARG00000075508 CGP 7955 25:36109719-36111779
GeneTranscriptPositionBiotype
ENSDARG00000075508 (si:dkey-108k21.10)
si:dkey-108k21.10 		ENSDART00000126625 (si:dkey-108k21.10-001) 36111159-36111779 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000LM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087854-ENSDARG00000088889 CGP 7955 25:36118862-36122432
GeneTranscriptPositionBiotype
ENSDARG00000087854 (ano9a)
anoctamin 9a 		ENSDART00000129255 (ano9a-201) 36118862-36119306 protein_coding
ENSDART00000156838 (ano9a-001) 36118862-36119236 protein_coding
ENSDARG00000088889 (si:dkey-108k21.14)
si:dkey-108k21.14 		ENSDART00000111706 (si:dkey-108k21.14-001) 36121818-36122432 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000LM_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018102-ENSMUSG00000036211 CGP 10090 13:23684199-23696542
GeneTranscriptPositionBiotype
ENSMUSG00000018102 (Hist1h2bc)
histone cluster 1, H2bc 		ENSMUST00000018246 (Hist1h2bc-001) 23684199-23692488 protein_coding
ENSMUSG00000036211 (Hist1h1t)
histone cluster 1, H1t 		ENSMUST00000041052 (Hist1h1t-001) 23695814-23696542 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000LM_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047246-ENSMUSG00000051627 CGP 10090 13:23583742-23622502
GeneTranscriptPositionBiotype
ENSMUSG00000047246 (Hist1h2be)
histone cluster 1, H2be 		ENSMUST00000051091 (Hist1h2be-001) 23583743-23621124 protein_coding
ENSMUST00000091704 (Hist1h2be-002) 23583742-23621094 protein_coding
ENSMUST00000129312 (Hist1h2be-003) 23618980-23621078 processed_transcript
ENSMUSG00000051627 (Hist1h1e)
histone cluster 1, H1e 		ENSMUST00000062045 (Hist1h1e-001) 23621755-23622502 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000LM_0005 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000095217-ENSMUSG00000058773 CGP 10090 13:21754123-21780625
GeneTranscriptPositionBiotype
ENSMUSG00000058773 (Hist1h1b)
histone cluster 1, H1b 		ENSMUST00000080511 (Hist1h1b-001) 21779883-21780625 protein_coding
ENSMUSG00000085331 (Gm11274)
predicted gene 11274 		ENSMUST00000146857 (Gm11274-001) 21769125-21770476 antisense
ENSMUSG00000095217 (Hist1h2bn)
histone cluster 1, H2bn 		ENSMUST00000091709 (Hist1h2bn-001) 21754123-21754503 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LM_0001ENSDARG00000075508ENSDART00000126625CIL_0000LM_0002ENSDARG00000087854ENSDART00000129255ENSDART00000156838ENSDARG00000088889ENSDART00000111706CIL_0000LM_0003ENSMUSG00000018102ENSMUST00000018246ENSMUSG00000036211ENSMUST00000041052CIL_0000LM_0004ENSMUSG00000047246ENSMUST00000051091ENSMUST00000091704ENSMUST00000129312ENSMUSG00000051627ENSMUST00000062045CIL_0000LM_0005ENSMUSG00000058773ENSMUST00000080511ENSMUSG00000085331ENSMUST00000146857ENSMUSG00000095217ENSMUST00000091709
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LM_0001ENSDARG00000075508ENSDART00000126625CIL_0000LM_0002ENSDARG00000087854ENSDART00000129255ENSDART00000156838ENSDARG00000088889ENSDART00000111706CIL_0000LM_0003ENSMUSG00000018102ENSMUST00000018246ENSMUSG00000036211ENSMUST00000041052CIL_0000LM_0004ENSMUSG00000047246ENSMUST00000051091ENSMUST00000091704ENSMUST00000129312ENSMUSG00000051627ENSMUST00000062045CIL_0000LM_0005ENSMUSG00000058773ENSMUST00000080511ENSMUSG00000085331ENSMUST00000146857ENSMUSG00000095217ENSMUST00000091709
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075508 ENSDART00000126625 N/A N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A N/A 0.215±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000087854 ENSDART00000129255 N/A N/A N/A N/A N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156838 N/A N/A N/A 0.238±0.00 N/A N/A N/A N/A 0.119±0.00 N/A 0.410±0.00 N/A N/A N/A
ENSDARG00000088889 ENSDART00000111706 N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018102 ENSMUST00000018246 130.941±44.91 180.444±24.68 146.999±8.23 32.811±14.15 91.551±37.19 214.490±15.02 71.645±12.10 289.894±17.52 141.409±64.67 66.190±13.03 49.300±3.21 108.982±28.41 305.803±391.57 10.426±3.56
ENSMUSG00000036211 ENSMUST00000041052 0.058±0.00 0.130±0.00 N/A 0.042±0.00 N/A 0.216±0.00 N/A 0.068±0.00 0.098±0.06 0.068±0.00 0.048±0.00 N/A 0.117±0.02 17.069±8.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000047246 ENSMUST00000051091 1.769±0.39 N/A 0.589±0.09 0.851±0.37 0.364±0.00 1.905±0.49 0.437±0.06 0.371±0.07 1.561±1.26 1.639±0.00 0.506±0.11 1.281±0.97 0.410±0.41 0.324±0.32
ENSMUST00000091704 1.092±0.37 1.794±0.50 0.170±0.00 1.601±0.24 2.124±0.55 3.284±1.32 0.653±0.00 0.326±0.20 0.750±0.66 1.053±0.50 0.553±0.00 3.037±2.32 0.887±0.73 0.539±0.33
ENSMUST00000129312 1.818±0.98 0.238±0.00 0.614±0.05 0.556±0.29 0.980±0.23 0.881±0.08 1.054±0.18 0.348±0.10 0.672±0.54 0.741±0.11 1.864±0.69 0.433±0.15 0.230±0.06 0.050±0.00
ENSMUSG00000051627 ENSMUST00000062045 1.661±0.34 0.746±0.27 1.169±0.58 3.241±2.23 1.093±0.23 2.081±0.83 0.703±0.21 1.070±0.14 7.224±8.01 1.772±0.30 2.697±0.65 1.102±0.58 3.113±3.71 0.457±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000058773 ENSMUST00000080511 0.321±0.28 0.265±0.16 0.231±0.00 1.359±0.65 0.331±0.08 0.915±0.30 0.068±0.00 0.088±0.03 3.820±3.69 0.303±0.13 0.235±0.10 1.448±0.58 0.903±0.99 0.217±0.02
ENSMUSG00000085331 ENSMUST00000146857 0.163±0.00 0.615±0.00 0.262±0.00 N/A 0.532±0.00 N/A 0.181±0.10 0.137±0.00 0.385±0.32 0.404±0.24 0.356±0.18 0.175±0.01 0.126±0.04 N/A
ENSMUSG00000095217 ENSMUST00000091709 1.170±0.39 1.470±0.58 1.838±1.41 10.874±4.88 1.464±1.17 5.244±0.88 0.399±0.18 0.259±0.01 11.132±15.68 1.399±0.77 0.281±0.00 5.691±4.14 2.232±2.47 1.591±0.38

Loading