C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000051735-ENSDARG00000070286 CGP 7955 25:37376502-37378377
GeneTranscriptPositionBiotype
ENSDARG00000051735 (si:ch211-113a14.18)
si:ch211-113a14.18 		ENSDART00000073403 (si:ch211-113a14.18-201) 37376502-37377026 protein_coding
ENSDART00000152195 (si:ch211-113a14.18-001) 37376502-37377151 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000LN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076766-ENSDARG00000075220 CGP 7955 7:76823085-76824939
GeneTranscriptPositionBiotype
ENSDARG00000075220 (si:ch211-113a14.19)
si:ch211-113a14.19 		ENSDART00000113375 (si:ch211-113a14.19-202) 76824553-76824939 protein_coding
ENSDARG00000076766 (zgc:163061)
zgc:163061 		ENSDART00000109720 (zgc:163061-202) 76823085-76823497 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000LN_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051627-ENSMUSG00000069270 CGP 10090 13:23621755-23683924
GeneTranscriptPositionBiotype
ENSMUSG00000051627 (Hist1h1e)
histone cluster 1, H1e 		ENSMUST00000062045 (Hist1h1e-001) 23621755-23622502 protein_coding
ENSMUSG00000069270 (Hist1h2ac)
histone cluster 1, H2ac 		ENSMUST00000171127 (Hist1h2ac-001) 23683449-23683924 protein_coding
ENSMUSG00000088030 (Gm24991)
predicted gene, 24991 		ENSMUST00000157405 (Gm24991-201) 23682545-23682652 rRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LN_0001ENSDARG00000051735ENSDART00000073403ENSDART00000152195CIL_0000LN_0002ENSDARG00000075220ENSDART00000113375ENSDARG00000076766ENSDART00000109720CIL_0000LN_0003ENSMUSG00000051627ENSMUST00000062045ENSMUSG00000069270ENSMUST00000171127ENSMUSG00000088030ENSMUST00000157405
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LN_0001ENSDARG00000051735ENSDART00000073403CIL_0000LN_0002ENSDARG00000075220ENSDART00000113375ENSDARG00000076766ENSDART00000109720CIL_0000LN_0003ENSMUSG00000051627ENSMUST00000062045ENSMUSG00000069270ENSMUST00000171127ENSMUSG00000088030ENSMUST00000157405
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000051735 ENSDART00000073403 N/A N/A N/A 0.294±0.00 N/A N/A 0.266±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075220 ENSDART00000113375 N/A N/A N/A 0.211±0.00 N/A N/A N/A 1.955±0.00 0.117±0.00 N/A 0.196±0.00 N/A N/A N/A
ENSDARG00000076766 ENSDART00000109720 N/A N/A N/A 0.235±0.00 N/A N/A N/A N/A N/A N/A 0.410±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000051627 ENSMUST00000062045 1.661±0.34 0.746±0.27 1.169±0.58 3.241±2.23 1.093±0.23 2.081±0.83 0.703±0.21 1.070±0.14 7.224±8.01 1.772±0.30 2.697±0.65 1.102±0.58 3.113±3.71 0.457±0.23
ENSMUSG00000069270 ENSMUST00000171127 0.627±0.29 0.402±0.18 0.361±0.05 4.859±1.39 0.978±0.53 3.291±0.96 0.080±0.00 0.285±0.10 4.101±5.99 0.486±0.14 0.402±0.14 1.654±0.83 3.223±2.48 0.533±0.14
ENSMUSG00000088030 ENSMUST00000157405 N/A N/A N/A 23.449±0.00 N/A N/A N/A N/A 26.712±5.92 N/A N/A N/A 34.586±19.68 26.361±0.00

Loading