C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000MB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198092-ENSG00000185873 CGP 9606 4:68053198-68245720
GeneTranscriptPositionBiotype
ENSG00000185873 (TMPRSS11B)
transmembrane protease, serine 11B 		ENST00000332644 (TMPRSS11B-001) 68226653-68245720 protein_coding
ENST00000502365 (TMPRSS11B-002) 68231833-68245691 retained_intron
ENST00000510856 (TMPRSS11B-003) 68228742-68229678 retained_intron
ENSG00000198092 (TMPRSS11F)
transmembrane protease, serine 11F 		ENST00000356291 (TMPRSS11F-001) 68053198-68129880 protein_coding
ENSG00000248049 (UBA6-AS1)
UBA6 antisense RNA 1 (head to head) 		ENST00000498917 (UBA6-AS1-003) 67701280-67722505 antisense
ENST00000499180 (UBA6-AS1-006) 68063062-68080226 antisense
ENST00000500538 (UBA6-AS1-002) 67701361-68080952 antisense
ENST00000502758 (UBA6-AS1-004) 67732144-67790511 antisense
ENST00000506606 (UBA6-AS1-001) 67701333-67722502 antisense
ENST00000511571 (UBA6-AS1-005) 68063083-68080645 antisense
ENST00000514109 (UBA6-AS1-007) 67701395-67721018 antisense
ENSG00000250426 (FTLP10)
ferritin, light polypeptide pseudogene 10 		ENST00000503647 (FTLP10-002) 68182292-68212470 processed_transcript
ENST00000505798 (FTLP10-001) 68182313-68182783 transcribed_processed_pseudogene
CIL_0000MB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048764-ENSMUSG00000035861 CGP 10090 5:86521898-86676362
GeneTranscriptPositionBiotype
ENSMUSG00000035861 (Tmprss11b)
transmembrane protease, serine 11B 		ENSMUST00000038448 (Tmprss11b-001) 86657631-86676362 protein_coding
ENSMUSG00000048764 (Tmprss11f)
transmembrane protease, serine 11f 		ENSMUST00000116553 (Tmprss11f-001) 86521898-86632424 protein_coding
ENSMUST00000161625 (Tmprss11f-002) 86563055-86632424 processed_transcript
ENSMUST00000173259 (Tmprss11f-003) 86591149-86632383 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MB_0001ENSG00000185873ENST00000332644ENST00000502365ENST00000510856ENSG00000198092ENST00000356291ENSG00000248049ENST00000498917ENST00000499180ENST00000500538ENST00000502758ENST00000506606ENST00000511571ENST00000514109ENSG00000250426ENST00000503647ENST00000505798CIL_0000MB_0002ENSMUSG00000035861ENSMUST00000038448ENSMUSG00000048764ENSMUST00000116553ENSMUST00000161625ENSMUST00000173259
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MB_0001ENSG00000185873ENST00000332644ENST00000502365ENST00000510856ENSG00000198092ENST00000356291ENSG00000248049ENST00000498917ENST00000500538ENST00000506606ENSG00000250426ENST00000503647ENST00000505798CIL_0000MB_0002ENSMUSG00000035861ENSMUST00000038448ENSMUSG00000048764ENSMUST00000116553ENSMUST00000161625
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000185873 ENST00000332644 0.018±0.00 0.031±0.00 N/A 0.028±0.00 0.025±0.00 N/A 0.013±0.00 0.003±0.00 0.003±0.00 N/A N/A 0.739±0.20 N/A 0.093±0.00
ENST00000502365 0.008±0.00 0.050±0.00 N/A 0.042±0.00 N/A 0.025±0.00 0.034±0.00 N/A N/A N/A 0.039±0.00 0.216±0.21 0.033±0.00 0.075±0.00
ENST00000510856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00
ENSG00000198092 ENST00000356291 N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.021±0.00 N/A N/A N/A 0.173±0.13 0.027±0.01 0.089±0.01
ENSG00000248049 ENST00000498917 0.449±0.00 N/A N/A 1.490±0.00 1.486±0.00 1.397±0.00 0.222±0.00 2.645±0.00 1.165±0.00 0.298±0.07 0.307±0.10 1.320±0.51 1.713±0.48 1.834±0.56
ENST00000499180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000500538 N/A 0.546±0.00 N/A 0.552±0.00 0.158±0.00 N/A 0.200±0.00 0.342±0.00 N/A N/A 0.027±0.00 N/A 0.129±0.04 0.396±0.00
ENST00000502758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506606 0.183±0.00 0.976±0.00 0.347±0.00 N/A 0.433±0.00 0.520±0.00 0.116±0.00 0.625±0.19 0.506±0.13 N/A 0.195±0.00 0.808±0.07 1.103±0.00 N/A
ENST00000511571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250426 ENST00000503647 0.042±0.00 0.126±0.00 N/A 0.111±0.00 0.041±0.00 0.010±0.00 0.010±0.00 0.021±0.00 N/A 0.055±0.00 N/A 0.024±0.00 N/A 0.098±0.06
ENST00000505798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.527±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035861 ENSMUST00000038448 0.037±0.02 N/A 0.012±0.01 0.004±0.00 0.026±0.00 N/A N/A N/A 0.019±0.00 0.468±0.11 N/A 0.127±0.08 0.011±0.01 0.182±0.05
ENSMUSG00000048764 ENSMUST00000116553 N/A N/A 0.143±0.10 N/A 0.024±0.01 N/A N/A N/A 0.003±0.00 0.315±0.02 0.010±0.00 N/A 0.016±0.01 0.138±0.05
ENSMUST00000161625 N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A 0.003±0.00 0.113±0.00 0.015±0.00 N/A 0.008±0.00 0.032±0.00
ENSMUST00000173259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading