C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000N1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091592-ENSG00000179314 CGP 9606 17:5499427-6124427
GeneTranscriptPositionBiotype
ENSG00000091592 (NLRP1)
NLR family, pyrin domain containing 1 		ENST00000262467 (NLRP1-001) 5501385-5584531 protein_coding
ENST00000269280 (NLRP1-010) 5514127-5584448 protein_coding
ENST00000345221 (NLRP1-201) 5514754-5584512 protein_coding
ENST00000354411 (NLRP1-012) 5514754-5583957 protein_coding
ENST00000544378 (NLRP1-002) 5499427-5584509 nonsense_mediated_decay
ENST00000568641 (NLRP1-004) 5499439-5501145 processed_transcript
ENST00000571307 (NLRP1-007) 5529895-5584512 processed_transcript
ENST00000571451 (NLRP1-008) 5514122-5584479 nonsense_mediated_decay
ENST00000572143 (NLRP1-013) 5584017-5619424 processed_transcript
ENST00000572272 (NLRP1-011) 5514754-5583957 protein_coding
ENST00000574406 (NLRP1-003) 5499428-5502963 processed_transcript
ENST00000574512 (NLRP1-005) 5502292-5518565 retained_intron
ENST00000576905 (NLRP1-014) 5583851-5619424 protein_coding
ENST00000577119 (NLRP1-009) 5514754-5583957 protein_coding
ENST00000613500 (NLRP1-202) 5501814-5584512 protein_coding
ENST00000617618 (NLRP1-203) 5514754-5584512 protein_coding
ENST00000619223 (NLRP1-204) 5514754-5584512 protein_coding
ENSG00000179314 (WSCD1)
WSC domain containing 1 		ENST00000317744 (WSCD1-201) 6070614-6124425 protein_coding
ENST00000539421 (WSCD1-202) 6071108-6121300 protein_coding
ENST00000563763 (WSCD1-012) 5772234-5930696 processed_transcript
ENST00000571494 (WSCD1-002) 6080744-6121301 nonsense_mediated_decay
ENST00000571973 (WSCD1-007) 6077950-6080920 protein_coding
ENST00000572764 (WSCD1-010) 6057807-6080649 processed_transcript
ENST00000573619 (WSCD1-011) 5772926-6080792 protein_coding
ENST00000573634 (WSCD1-005) 6069117-6120738 protein_coding
ENST00000574232 (WSCD1-004) 6071108-6120710 protein_coding
ENST00000574946 (WSCD1-001) 6069106-6124427 protein_coding
ENST00000576083 (WSCD1-006) 6070424-6088104 protein_coding
ENST00000576233 (WSCD1-008) 6080147-6080794 protein_coding
ENST00000576947 (WSCD1-009) 6081882-6090361 protein_coding
ENSG00000262961 (CTB-162E12.1)
 ENST00000576249 (CTB-162E12.1-001) 5730289-5731085 processed_pseudogene
CIL_0000N1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070390-ENSMUSG00000020811 CGP 10090 11:71153102-71789647
GeneTranscriptPositionBiotype
ENSMUSG00000020811 (Wscd1)
WSC domain containing 1 		ENSMUST00000021168 (Wscd1-003) 71750685-71789647 protein_coding
ENSMUST00000108510 (Wscd1-002) 71751376-71789647 protein_coding
ENSMUST00000108511 (Wscd1-001) 71750980-71789647 protein_coding
ENSMUST00000132095 (Wscd1-005) 71768676-71785285 processed_transcript
ENSMUST00000138339 (Wscd1-006) 71751376-71760968 retained_intron
ENSMUST00000150531 (Wscd1-004) 71749920-71760112 protein_coding
ENSMUSG00000070390 (Nlrp1b)
NLR family, pyrin domain containing 1B 		ENSMUST00000094046 (Nlrp1b-201) 71156000-71228467 protein_coding
ENSMUST00000108514 (Nlrp1b-202) 71155993-71201298 protein_coding
ENSMUST00000108515 (Nlrp1b-002) 71153102-71201456 protein_coding
ENSMUST00000108516 (Nlrp1b-001) 71153127-71230733 protein_coding
ENSMUST00000136493 (Nlrp1b-003) 71153102-71230733 nonsense_mediated_decay
ENSMUSG00000072753 (9230020A06Rik)
RIKEN cDNA 9230020A06 gene 		ENSMUST00000151841 (9230020A06Rik-001) 71516536-71573183 lincRNA
ENSMUST00000171420 (9230020A06Rik-201) 71547765-71572476 lincRNA
ENSMUSG00000085230 (Gm16013)
predicted gene 16013 		ENSMUST00000152249 (Gm16013-001) 71429828-71436180 lincRNA
ENSMUSG00000085251 (Gm12326)
predicted gene 12326 		ENSMUST00000132986 (Gm12326-002) 71739397-71740466 lincRNA
ENSMUST00000152957 (Gm12326-001) 71740011-71740447 lincRNA
ENSMUSG00000087116 (Gm12324)
predicted gene 12324 		ENSMUST00000130837 (Gm12324-001) 71647076-71658477 lincRNA
ENSMUSG00000092528 (Nlrp1c-ps)
NLR family, pyrin domain containing 1C, pseudogene 		ENSMUST00000171546 (Nlrp1c-ps-002) 71242430-71285232 processed_transcript
ENSMUST00000174668 (Nlrp1c-ps-001) 71242430-71281219 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000N1_0001ENSG00000091592ENST00000262467ENST00000269280ENST00000345221ENST00000354411ENST00000544378ENST00000568641ENST00000571307ENST00000571451ENST00000572272ENST00000574512ENST00000577119ENST00000613500ENST00000617618ENSG00000179314ENST00000317744ENST00000539421ENST00000571494ENST00000571973ENST00000573634ENST00000574232ENST00000574946ENSG00000262961ENST00000576249CIL_0000N1_0002ENSMUSG00000020811ENSMUST00000021168ENSMUST00000108510ENSMUST00000108511ENSMUST00000132095ENSMUST00000138339ENSMUSG00000070390ENSMUST00000094046ENSMUST00000108514ENSMUST00000108515ENSMUST00000108516ENSMUST00000136493ENSMUSG00000072753ENSMUST00000151841ENSMUST00000171420ENSMUSG00000085230ENSMUST00000152249ENSMUSG00000085251ENSMUST00000132986ENSMUST00000152957ENSMUSG00000087116ENSMUST00000130837ENSMUSG00000092528ENSMUST00000171546ENSMUST00000174668
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091592 ENST00000262467 3.183±0.00 N/A N/A N/A 1.524±0.00 0.358±0.00 0.503±0.00 N/A N/A 1.987±0.06 N/A 1.225±0.00 1.421±0.23 N/A
ENST00000269280 2.125±0.00 N/A N/A N/A N/A 0.425±0.00 0.638±0.00 N/A 0.164±0.00 2.410±0.00 0.347±0.00 1.635±0.00 1.482±0.07 N/A
ENST00000345221 2.000±0.00 N/A N/A N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A
ENST00000354411 N/A N/A N/A N/A 1.273±0.00 N/A N/A 0.583±0.00 N/A 0.968±0.00 N/A N/A N/A N/A
ENST00000544378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.137±0.00
ENST00000568641 N/A N/A N/A 114.600±61.19 N/A 6.341±0.00 N/A 3.772±0.00 0.562±0.00 11.285±0.00 N/A 37.319±32.82 10.640±1.54 32.388±0.31
ENST00000571307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A
ENST00000571451 N/A 7.104±0.00 0.225±0.00 N/A 1.407±0.94 0.577±0.00 0.227±0.00 0.154±0.00 0.564±0.12 1.277±0.00 N/A 0.574±0.00 N/A N/A
ENST00000572143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572272 N/A 4.594±0.00 N/A N/A 0.889±0.31 0.775±0.00 0.480±0.08 N/A 0.433±0.00 N/A N/A 1.011±0.00 1.772±0.00 1.970±0.00
ENST00000574406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.00 N/A N/A
ENST00000576905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577119 N/A N/A 0.309±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.479±0.00 N/A N/A
ENST00000617618 1.797±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179314 ENST00000317744 2.576±0.00 1.098±0.00 0.809±0.00 1.536±0.31 0.700±0.25 1.732±0.06 0.795±0.56 1.343±1.24 0.277±0.13 0.251±0.00 1.494±0.38 0.381±0.27 3.967±0.26 1.085±0.46
ENST00000539421 N/A N/A N/A N/A 0.773±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.932±0.00
ENST00000563763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571494 3.401±0.00 1.479±0.00 N/A 2.291±0.56 N/A N/A 0.729±0.00 0.274±0.00 N/A N/A 0.912±0.00 0.258±0.04 2.264±0.00 1.949±0.00
ENST00000571973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.991±0.00
ENST00000572764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573634 N/A N/A N/A N/A N/A N/A N/A 0.331±0.00 0.205±0.00 N/A N/A N/A N/A N/A
ENST00000574232 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.661±0.00 N/A N/A N/A N/A
ENST00000574946 N/A N/A N/A 1.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262961 ENST00000576249 N/A N/A N/A N/A N/A 0.299±0.00 N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020811 ENSMUST00000021168 N/A N/A 0.312±0.00 4.281±0.98 0.475±0.00 0.594±0.00 N/A N/A 0.080±0.04 N/A 0.451±0.31 0.915±0.46 0.186±0.05 0.086±0.02
ENSMUST00000108510 N/A N/A N/A N/A N/A 0.172±0.02 N/A N/A N/A N/A 0.237±0.07 0.380±0.13 N/A N/A
ENSMUST00000108511 1.911±0.12 2.131±0.15 1.069±0.19 22.855±10.44 0.982±0.47 1.224±0.30 2.669±0.33 4.466±0.47 0.110±0.04 20.947±2.99 0.742±0.19 2.695±0.93 0.849±0.68 0.241±0.00
ENSMUST00000132095 N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A 0.400±0.00 N/A N/A 0.214±0.00
ENSMUST00000138339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 0.614±0.00 N/A N/A
ENSMUST00000150531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000070390 ENSMUST00000094046 N/A 0.076±0.04 N/A N/A 0.105±0.02 0.147±0.00 0.026±0.01 0.033±0.01 0.077±0.04 0.126±0.08 0.026±0.00 N/A 0.020±0.00 0.068±0.03
ENSMUST00000108514 0.226±0.00 0.070±0.00 N/A 0.006±0.00 0.219±0.09 0.614±0.42 0.048±0.01 0.112±0.05 0.054±0.02 0.237±0.07 0.011±0.00 0.121±0.05 0.036±0.02 0.031±0.02
ENSMUST00000108515 N/A 0.085±0.01 N/A N/A 0.328±0.09 0.404±0.05 N/A 0.087±0.01 0.054±0.03 N/A 0.030±0.00 0.048±0.00 0.013±0.01 0.017±0.00
ENSMUST00000108516 0.209±0.00 0.134±0.03 N/A 0.011±0.00 N/A 0.017±0.00 N/A 0.048±0.02 N/A 0.172±0.00 0.031±0.01 0.067±0.03 0.008±0.00 0.084±0.00
ENSMUST00000136493 0.170±0.07 N/A N/A N/A 0.183±0.18 N/A N/A N/A 0.054±0.04 0.092±0.00 0.029±0.01 0.164±0.00 N/A N/A
ENSMUSG00000072753 ENSMUST00000151841 0.066±0.00 0.048±0.00 N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A 0.085±0.07 0.016±0.01 0.023±0.00
ENSMUST00000171420 N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.10 0.105±0.00 0.046±0.00
ENSMUSG00000085230 ENSMUST00000152249 N/A N/A N/A 0.313±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.816±0.72
ENSMUSG00000085251 ENSMUST00000132986 N/A N/A N/A 0.525±0.60 N/A N/A N/A 0.865±0.42 N/A 0.100±0.03 N/A 0.176±0.08 N/A N/A
ENSMUST00000152957 N/A N/A N/A 0.623±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087116 ENSMUST00000130837 N/A N/A N/A 0.014±0.01 N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A 0.009±0.00 0.020±0.01
ENSMUSG00000092528 ENSMUST00000171546 N/A 0.016±0.00 0.202±0.00 N/A 0.012±0.01 N/A N/A 0.003±0.00 0.003±0.00 0.002±0.00 0.001±0.00 0.021±0.02 N/A 0.001±0.00
ENSMUST00000174668 0.122±0.04 0.016±0.00 N/A 0.012±0.00 0.111±0.08 0.076±0.03 0.044±0.02 0.032±0.02 0.039±0.02 0.055±0.03 0.011±0.00 0.118±0.07 0.016±0.01 0.046±0.04

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