C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000NX_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000141030-ENSG00000205309 | CGP | 9606 | 17:17246820-17347663  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000141030  (COPS3)COP9 signalosome subunit 3 |
ENST00000268717 (COPS3-001)
|
17246836-17281293 | protein_coding | |
|
ENST00000417352 (COPS3-008)
|
17260374-17281239 | protein_coding | ||
|
ENST00000439936 (COPS3-002)
|
17246874-17280700 | protein_coding | ||
|
ENST00000462236 (COPS3-003)
|
17264934-17281160 | retained_intron | ||
|
ENST00000463097 (COPS3-010)
|
17248949-17255055 | retained_intron | ||
|
ENST00000471414 (COPS3-009)
|
17254887-17260696 | retained_intron | ||
|
ENST00000477299 (COPS3-006)
|
17262020-17281246 | nonsense_mediated_decay | ||
|
ENST00000486032 (COPS3-011)
|
17246835-17247887 | retained_intron | ||
|
ENST00000486810 (COPS3-004)
|
17260302-17276066 | retained_intron | ||
|
ENST00000492672 (COPS3-007)
|
17261998-17281246 | nonsense_mediated_decay | ||
|
ENST00000495640 (COPS3-005)
|
17264860-17270807 | nonsense_mediated_decay | ||
|
ENST00000539941 (COPS3-014)
|
17246820-17280777 | protein_coding | ||
|
ENST00000577210 (COPS3-019)
|
17260305-17281186 | nonsense_mediated_decay | ||
|
ENST00000577246 (COPS3-015)
|
17262046-17281273 | nonsense_mediated_decay | ||
|
ENST00000578317 (COPS3-013)
|
17246837-17281191 | nonsense_mediated_decay | ||
|
ENST00000579716 (COPS3-020)
|
17246835-17249027 | protein_coding | ||
|
ENST00000583160 (COPS3-018)
|
17261966-17270976 | protein_coding | ||
|
ENST00000584216 (COPS3-016)
|
17260398-17281273 | nonsense_mediated_decay | ||
|
ENSG00000205309 (NT5M) 5',3'-nucleotidase, mitochondrial |
ENST00000389022 (NT5M-007)
|
17303335-17347661 | protein_coding | |
|
ENST00000470418 (NT5M-004)
|
17303390-17346858 | nonsense_mediated_decay | ||
|
ENST00000478373 (NT5M-002)
|
17303366-17344866 | nonsense_mediated_decay | ||
|
ENST00000480529 (NT5M-005)
|
17345269-17347152 | processed_transcript | ||
|
ENST00000483704 (NT5M-003)
|
17303678-17347663 | nonsense_mediated_decay | ||
|
ENST00000582909 (NT5M-006)
|
17333511-17347208 | processed_transcript | ||
|
ENST00000616989 (NT5M-201)
|
17303335-17347661 | protein_coding | ||
| CIL_0000NX_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000019373-ENSMUSG00000032615 | CGP | 10090 | 11:59817795-59880968 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000019373 (Cops3) COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana) |
ENSMUST00000019517 (Cops3-001)
|
59817795-59839838 | protein_coding | |
|
ENSMUST00000124101 (Cops3-002)
|
59823286-59839838 | processed_transcript | ||
|
ENSMUST00000126489 (Cops3-007)
|
59817795-59818687 | processed_transcript | ||
|
ENSMUST00000130027 (Cops3-005)
|
59826210-59839838 | processed_transcript | ||
|
ENSMUST00000133652 (Cops3-006)
|
59836638-59839812 | processed_transcript | ||
|
ENSMUST00000136901 (Cops3-008)
|
59824314-59833293 | processed_transcript | ||
|
ENSMUST00000141415 (Cops3-003)
|
59833091-59839752 | protein_coding | ||
|
ENSMUST00000156837 (Cops3-004)
|
59821360-59836935 | protein_coding | ||
|
ENSMUSG00000032615 (Nt5m) 5',3'-nucleotidase, mitochondrial |
ENSMUST00000102695 (Nt5m-001)
|
59848073-59876533 | protein_coding | |
|
ENSMUST00000137695 (Nt5m-004)
|
59848104-59876533 | processed_transcript | ||
|
ENSMUST00000149076 (Nt5m-002)
|
59839447-59876533 | processed_transcript | ||
|
ENSMUST00000154699 (Nt5m-003)
|
59839447-59880968 | processed_transcript | ||
Expression Patterns
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