C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000NZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102580-ENSG00000102595 CGP 9606 13:95677139-96053482
GeneTranscriptPositionBiotype
ENSG00000102580 (DNAJC3)
DnaJ (Hsp40) homolog, subfamily C, member 3 		ENST00000376795 (DNAJC3-002) 95677158-95791843 protein_coding
ENST00000602402 (DNAJC3-001) 95677139-95794989 protein_coding
ENSG00000102595 (UGGT2)
UDP-glucose glycoprotein glucosyltransferase 2 		ENST00000376712 (UGGT2-201) 95990145-96053393 protein_coding
ENST00000376714 (UGGT2-202) 95983524-96053482 protein_coding
ENST00000376747 (UGGT2-001) 95801580-96053383 protein_coding
ENST00000397618 (UGGT2-203) 95984910-96053400 protein_coding
ENST00000461329 (UGGT2-008) 95984904-95999307 processed_transcript
ENST00000462472 (UGGT2-005) 95854452-95859895 processed_transcript
ENST00000463054 (UGGT2-004) 95876902-95895248 retained_intron
ENST00000465196 (UGGT2-003) 95983523-96013411 processed_transcript
ENST00000467305 (UGGT2-002) 95985047-96013476 processed_transcript
ENST00000476866 (UGGT2-006) 95863434-95877340 processed_transcript
ENST00000491509 (UGGT2-007) 95867339-95894570 processed_transcript
ENST00000621375 (UGGT2-204) 95801701-96053338 protein_coding
ENSG00000226977 (HMGN1P24)
high mobility group nucleosome binding domain 1 pseudogene 24 		ENST00000412282 (HMGN1P24-001) 95809310-95809607 processed_pseudogene
ENSG00000227714 (MTND6P18)
MT-ND6 pseudogene 18 		ENST00000439477 (MTND6P18-001) 95693983-95694495 processed_pseudogene
ENSG00000229622 (MTND5P2)
MT-ND5 pseudogene 2 		ENST00000442927 (MTND5P2-001) 95692538-95693972 processed_pseudogene
ENSG00000232373 (MTCYBP3)
MT-CYB pseudogene 3 		ENST00000445588 (MTCYBP3-001) 95694569-95695705 processed_pseudogene
ENSG00000276809 (RP11-10E18.7)
 ENST00000622881 (RP11-10E18.7-001) 95744726-95745765 sense_intronic
CIL_0000NZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022136-ENSMUSG00000042104 CGP 10090 14:118937932-119099430
GeneTranscriptPositionBiotype
ENSMUSG00000022136 (Dnajc3)
DnaJ (Hsp40) homolog, subfamily C, member 3 		ENSMUST00000022734 (Dnajc3-201) 118937932-118981702 protein_coding
ENSMUSG00000042104 (Uggt2)
UDP-glucose glycoprotein glucosyltransferase 2 		ENSMUST00000123350 (Uggt2-006) 118986193-119007225 retained_intron
ENSMUST00000126023 (Uggt2-012) 118986815-119007399 retained_intron
ENSMUST00000127153 (Uggt2-003) 119014532-119058280 nonsense_mediated_decay
ENSMUST00000131424 (Uggt2-005) 118986418-119006717 processed_transcript
ENSMUST00000136924 (Uggt2-002) 119059243-119099430 retained_intron
ENSMUST00000138720 (Uggt2-014) 118998115-119009061 processed_transcript
ENSMUST00000138923 (Uggt2-007) 119044217-119049752 retained_intron
ENSMUST00000148022 (Uggt2-004) 118985039-119007465 retained_intron
ENSMUST00000148648 (Uggt2-009) 119001724-119008169 retained_intron
ENSMUST00000153693 (Uggt2-008) 119014532-119032233 nonsense_mediated_decay
ENSMUST00000154130 (Uggt2-010) 119001890-119007556 processed_transcript
ENSMUST00000156203 (Uggt2-001) 118985039-119099430 protein_coding
ENSMUST00000173391 (Uggt2-013) 119002835-119018877 protein_coding
ENSMUST00000173470 (Uggt2-011) 119032361-119036039 retained_intron
ENSMUSG00000087479 (Gm16835)
predicted gene, 16835 		ENSMUST00000140488 (Gm16835-001) 119098965-119115074 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NZ_0001ENSG00000102580ENST00000376795ENST00000602402ENSG00000102595ENST00000376712ENST00000376714ENST00000376747ENST00000397618ENST00000461329ENST00000462472ENST00000463054ENST00000465196ENST00000467305ENST00000476866ENST00000491509ENST00000621375ENSG00000226977ENST00000412282ENSG00000227714ENST00000439477ENSG00000229622ENST00000442927ENSG00000232373ENST00000445588ENSG00000276809ENST00000622881CIL_0000NZ_0002ENSMUSG00000022136ENSMUST00000022734ENSMUSG00000042104ENSMUST00000123350ENSMUST00000126023ENSMUST00000127153ENSMUST00000131424ENSMUST00000136924ENSMUST00000138720ENSMUST00000138923ENSMUST00000148022ENSMUST00000148648ENSMUST00000153693ENSMUST00000154130ENSMUST00000156203ENSMUST00000173391ENSMUST00000173470ENSMUSG00000087479ENSMUST00000140488
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NZ_0001ENSG00000102580ENST00000376795ENST00000602402ENSG00000102595ENST00000376712ENST00000376747ENST00000397618ENST00000461329ENST00000463054ENST00000465196ENST00000621375ENSG00000226977ENST00000412282ENSG00000227714ENST00000439477ENSG00000229622ENST00000442927ENSG00000232373ENST00000445588ENSG00000276809ENST00000622881CIL_0000NZ_0002ENSMUSG00000022136ENSMUST00000022734ENSMUSG00000042104ENSMUST00000123350ENSMUST00000126023ENSMUST00000127153ENSMUST00000131424ENSMUST00000148022ENSMUST00000156203ENSMUSG00000087479ENSMUST00000140488
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102580 ENST00000376795 N/A N/A 1.061±0.00 N/A 3.172±0.00 N/A N/A 3.750±0.00 2.464±0.00 2.771±0.00 0.796±0.00 1.669±0.00 1.183±0.00 3.254±0.00
ENST00000602402 18.226±0.00 7.559±0.00 3.337±0.00 4.957±1.30 9.260±1.35 10.985±1.62 5.984±2.06 14.376±3.80 15.934±5.39 12.293±2.59 2.375±1.67 9.322±4.27 5.309±1.74 6.986±4.77
ENSG00000102595 ENST00000376712 1.075±0.00 1.161±0.00 N/A 1.842±0.00 0.775±0.00 0.886±0.00 0.585±0.00 N/A 2.090±0.00 1.363±0.00 0.173±0.00 1.334±0.66 N/A 2.941±0.12
ENST00000376714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376747 2.619±0.00 0.757±0.00 1.632±0.00 2.991±2.61 2.100±1.03 1.911±0.48 0.877±0.22 2.466±0.00 2.331±1.47 1.299±0.18 0.274±0.00 2.288±1.55 2.246±0.53 2.598±0.35
ENST00000397618 N/A N/A N/A N/A N/A N/A N/A N/A 1.097±0.00 N/A N/A N/A 1.481±0.00 N/A
ENST00000461329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.242±0.00 N/A
ENST00000462472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.00 N/A N/A N/A
ENST00000465196 N/A N/A N/A N/A N/A N/A N/A N/A 11.695±0.00 N/A N/A N/A N/A N/A
ENST00000467305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.331±0.00 3.274±0.00 4.263±0.00
ENSG00000226977 ENST00000412282 N/A 0.055±0.00 3.003±0.00 0.056±0.00 0.662±0.55 N/A 0.394±0.00 N/A N/A 1.109±0.00 N/A 0.563±0.37 N/A 0.191±0.00
ENSG00000227714 ENST00000439477 N/A 0.105±0.00 1.042±0.00 N/A N/A N/A 0.070±0.00 0.117±0.00 N/A N/A N/A 0.054±0.00 N/A N/A
ENSG00000229622 ENST00000442927 N/A 0.051±0.00 N/A 0.026±0.00 0.145±0.14 0.476±0.00 0.030±0.00 0.466±0.43 0.058±0.00 N/A N/A 0.035±0.02 0.052±0.00 N/A
ENSG00000232373 ENST00000445588 0.010±0.00 0.078±0.00 0.166±0.00 0.062±0.00 0.140±0.00 0.235±0.00 0.163±0.15 0.459±0.44 N/A 0.154±0.13 0.236±0.15 0.093±0.03 N/A N/A
ENSG00000276809 ENST00000622881 0.140±0.00 0.219±0.00 0.125±0.00 0.622±0.18 0.445±0.41 0.172±0.00 0.170±0.09 0.093±0.00 0.007±0.00 0.337±0.15 0.495±0.00 0.221±0.12 0.035±0.01 0.073±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022136 ENSMUST00000022734 14.218±3.11 29.366±2.85 18.829±1.27 7.332±3.24 17.353±4.14 20.727±1.61 6.837±0.91 25.120±2.03 25.688±12.20 29.797±2.75 5.688±0.44 27.050±11.29 27.530±8.07 8.466±3.03
ENSMUSG00000042104 ENSMUST00000123350 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.03 N/A N/A 1.989±0.97 0.146±0.00 0.596±0.00
ENSMUST00000126023 N/A N/A N/A 17.942±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.295±0.14 N/A
ENSMUST00000127153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.411±0.00 N/A N/A
ENSMUST00000131424 N/A N/A 2.153±0.36 N/A N/A N/A N/A 0.805±0.12 0.813±0.02 N/A 1.714±0.00 N/A N/A N/A
ENSMUST00000136924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148022 N/A N/A 1.536±0.20 11.308±0.00 1.046±0.40 0.554±0.11 0.862±0.00 0.693±0.32 0.487±0.17 0.802±0.07 0.972±0.11 1.274±0.40 0.380±0.05 N/A
ENSMUST00000148648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156203 0.421±0.22 N/A 0.916±0.05 3.816±1.86 0.373±0.07 0.217±0.10 0.189±0.05 0.216±0.06 0.203±0.12 0.627±0.06 N/A 1.238±1.00 0.869±0.10 1.905±0.08
ENSMUST00000173391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087479 ENSMUST00000140488 0.933±0.00 4.668±0.32 N/A 2.569±0.00 0.606±0.09 0.440±0.04 N/A 0.247±0.05 0.144±0.06 0.357±0.00 N/A 2.557±2.26 N/A N/A

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