Institute of Cardiovascular Regeneration Webtool Repository

Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'cake_dev_eng'
$value = array(
	'LC_MESSAGES' => array()
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
I18n::translate() - CORE/Cake/I18n/I18n.php, line 237
__d - CORE/Cake/basics.php, line 617
Cache::write() - CORE/Cake/Cache/Cache.php, line 321
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = null
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = array(
	(int) 0 => 'conserved_region_elements',
	(int) 1 => 'conserved_regions',
	(int) 2 => 'diffexp',
	(int) 3 => 'experiment',
	(int) 4 => 'expressed_transcripts',
	(int) 5 => 'external_accessions',
	(int) 6 => 'genes',
	(int) 7 => 'go_annotations',
	(int) 8 => 'homologues',
	(int) 9 => 'maptranscripttoregion',
	(int) 10 => 'organism',
	(int) 11 => 'sample',
	(int) 12 => 'study',
	(int) 13 => 'synonyms',
	(int) 14 => 'transcripts'
)
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 236
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Region Summary

CIL_0000PZ_0001 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSDARG00000074759-ENSDARG00000062593	CGP	7955	13:18415272-18553216
Gene	Transcript	Position	Biotype
ENSDARG00000062593 (stox1) storkhead box 1	ENSDART00000090712 (stox1-201)	18520519-18553214	protein_coding
ENSDARG00000062593 (stox1) storkhead box 1	ENSDART00000127962 (stox1-001)	18520521-18553216	protein_coding
ENSDARG00000074759 (ccar1) cell division cycle and apoptosis regulator 1	ENSDART00000109579 (ccar1-201)	18420193-18483097	protein_coding
	ENSDART00000111129 (ccar1-202)	18420193-18484059	protein_coding
	ENSDART00000133057 (ccar1-001)	18415272-18484059	protein_coding
	ENSDART00000138172 (ccar1-002)	18420181-18434796	protein_coding
	ENSDART00000140406 (ccar1-004)	18449874-18463377	processed_transcript
	ENSDART00000143350 (ccar1-003)	18443520-18449895	retained_intron

CIL_0000PZ_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000060339-ENSG00000165730	CGP	9606	10:68721012-68895432
Gene	Transcript	Position	Biotype
ENSG00000060339 (CCAR1) cell division cycle and apoptosis regulator 1	ENST00000265872 (CCAR1-001)	68721214-68792377	protein_coding
	ENST00000398676 (CCAR1-019)	68773059-68786986	retained_intron
	ENST00000479143 (CCAR1-006)	68755476-68765927	nonsense_mediated_decay
	ENST00000480627 (CCAR1-004)	68787836-68789872	retained_intron
	ENST00000483264 (CCAR1-005)	68755182-68757298	processed_transcript
	ENST00000494903 (CCAR1-018)	68721252-68736910	protein_coding
	ENST00000536012 (CCAR1-014)	68721242-68771431	protein_coding
	ENST00000536391 (CCAR1-017)	68721012-68742408	protein_coding
	ENST00000538031 (CCAR1-003)	68721216-68742564	protein_coding
	ENST00000539250 (CCAR1-020)	68760810-68771331	retained_intron
	ENST00000539539 (CCAR1-012)	68721239-68788316	protein_coding
	ENST00000540210 (CCAR1-015)	68721255-68791355	nonsense_mediated_decay
	ENST00000541012 (CCAR1-010)	68721227-68771444	nonsense_mediated_decay
	ENST00000543225 (CCAR1-013)	68721242-68771301	protein_coding
	ENST00000543229 (CCAR1-011)	68721239-68771418	nonsense_mediated_decay
	ENST00000543706 (CCAR1-021)	68757350-68788047	protein_coding
	ENST00000543719 (CCAR1-009)	68721226-68791266	protein_coding
ENSG00000165730 (STOX1) storkhead box 1	ENST00000298596 (STOX1-002)	68827541-68893060	protein_coding
	ENST00000399162 (STOX1-004)	68827624-68893060	protein_coding
	ENST00000399165 (STOX1-003)	68827624-68893060	protein_coding
	ENST00000399169 (STOX1-001)	68827541-68895432	protein_coding
ENSG00000221184 (MIR1254-1) microRNA 1254-1	ENST00000408257 (MIR1254-1-201)	68759318-68759414	miRNA

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSDARG00000062593

ENSDART00000090712

N/A

1.150±0.70

N/A

0.193±0.08

0.772±0.42

0.018±0.00

N/A

0.130±0.00

N/A

ENSDART00000127962

N/A

1.091±0.07

N/A

0.456±0.00

0.402±0.01

0.018±0.00

N/A

0.130±0.00

N/A

ENSDARG00000074759

ENSDART00000109579

N/A

2.423±0.00

N/A

0.881±0.00

1.051±0.00

N/A

ENSDART00000111129

N/A

2.316±0.58

N/A

0.203±0.00

N/A

ENSDART00000133057

N/A

4.105±0.00

N/A

1.217±0.00

0.880±0.00

N/A

ENSDART00000138172

N/A

0.193±0.00

N/A

ENSDART00000140406

N/A

ENSDART00000143350

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000060339

ENST00000265872

N/A

0.430±0.00

2.380±0.00

1.110±0.00

0.474±0.31

0.372±0.00

N/A

1.577±0.00

N/A

4.878±0.00

2.726±2.27

N/A

ENST00000398676

N/A

ENST00000479143

N/A

ENST00000480627

N/A

38.309±0.00

N/A

ENST00000483264

N/A

ENST00000494903

N/A

ENST00000536012

N/A

1.878±0.00

1.369±0.00

N/A

3.208±0.00

N/A

ENST00000536391

N/A

ENST00000538031

N/A

5.487±0.00

6.233±0.00

N/A

2.231±0.00

N/A

11.588±0.00

N/A

3.341±0.00

N/A

ENST00000539250

N/A

33.914±0.00

35.304±0.00

43.992±0.00

ENST00000539539

N/A

2.460±0.00

N/A

1.550±0.23

N/A

1.049±0.00

2.131±0.00

N/A

ENST00000540210

3.918±0.00

4.287±0.00

0.840±0.00

3.062±0.00

3.350±0.00

3.163±0.00

1.588±0.00

2.580±0.00

1.443±0.00

2.101±0.00

2.827±0.00

5.332±1.14

2.405±0.57

7.426±2.11

ENST00000541012

N/A

0.655±0.00

2.498±0.00

N/A

0.968±0.00

N/A

ENST00000543225

N/A

ENST00000543229

N/A

1.504±0.00

N/A

0.916±0.00

N/A

ENST00000543706

N/A

4.955±0.00

N/A

ENST00000543719

1.881±0.00

2.650±0.00

N/A

2.075±1.58

4.094±0.00

3.847±0.00

2.002±0.00

3.035±2.00

1.338±0.00

4.217±0.00

N/A

2.806±0.00

0.570±0.00

3.820±0.00

ENSG00000165730

ENST00000298596

2.285±0.00

0.245±0.00

N/A

3.281±0.97

0.533±0.17

0.622±0.00

0.157±0.05

0.626±0.00

0.500±0.00

0.933±0.24

N/A

0.521±0.20

0.234±0.05

0.986±0.24

ENST00000399162

N/A

0.668±0.00

N/A

ENST00000399165

N/A

2.689±0.00

1.190±0.00

N/A

1.351±0.00

N/A

ENST00000399169

1.538±0.00

0.349±0.00

0.243±0.00

1.424±0.65

N/A

0.959±0.00

0.056±0.00

0.590±0.00

0.155±0.14

N/A

0.062±0.00

0.701±0.46

0.314±0.02

0.820±0.00

ENSG00000221184

ENST00000408257

0.253±0.00

5.483±0.00

N/A

0.540±0.00

1.868±0.00

N/A

2.077±0.00

N/A

0.765±0.00

N/A

47.298±0.00

N/A

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'file_map'
$value = array(
	'Configure' => '/var/www/c-it-loci/lib/Cake/Core/Configure.php',
	'Hash' => '/var/www/c-it-loci/lib/Cake/Utility/Hash.php',
	'Cache' => '/var/www/c-it-loci/lib/Cake/Cache/Cache.php',
	'FileEngine' => '/var/www/c-it-loci/lib/Cake/Cache/Engine/FileEngine.php',
	'CacheEngine' => '/var/www/c-it-loci/lib/Cake/Cache/CacheEngine.php',
	'Inflector' => '/var/www/c-it-loci/lib/Cake/Utility/Inflector.php',
	'ErrorHandler' => '/var/www/c-it-loci/lib/Cake/Error/ErrorHandler.php',
	'CakePlugin' => '/var/www/c-it-loci/lib/Cake/Core/CakePlugin.php',
	'CakeLog' => '/var/www/c-it-loci/lib/Cake/Log/CakeLog.php',
	'LogEngineCollection' => '/var/www/c-it-loci/lib/Cake/Log/LogEngineCollection.php',
	'ObjectCollection' => '/var/www/c-it-loci/lib/Cake/Utility/ObjectCollection.php',
	'FileLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/FileLog.php',
	'BaseLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/BaseLog.php',
	'CakeLogInterface' => '/var/www/c-it-loci/lib/Cake/Log/CakeLogInterface.php',
	'Debugger' => '/var/www/c-it-loci/lib/Cake/Utility/Debugger.php',
	'String' => '/var/www/c-it-loci/lib/Cake/Utility/String.php',
	'Dispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Dispatcher.php',
	'CakeEventListener' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventListener.php',
	'CakeRequest' => '/var/www/c-it-loci/lib/Cake/Network/CakeRequest.php',
	'CakeResponse' => '/var/www/c-it-loci/lib/Cake/Network/CakeResponse.php',
	'CakeEvent' => '/var/www/c-it-loci/lib/Cake/Event/CakeEvent.php',
	'CakeEventManager' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventManager.php',
	'AssetDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/AssetDispatcher.php',
	'DispatcherFilter' => '/var/www/c-it-loci/lib/Cake/Routing/DispatcherFilter.php',
	'CacheDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/CacheDispatcher.php',
	'Router' => '/var/www/c-it-loci/lib/Cake/Routing/Router.php',
	'CakeRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/CakeRoute.php',
	'PluginShortRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/PluginShortRoute.php',
	'RegionController' => '/var/www/c-it-loci/app/Controller/RegionController.php',
	'AppController' => '/var/www/c-it-loci/app/Controller/AppController.php',
	'Controller' => '/var/www/c-it-loci/lib/Cake/Controller/Controller.php',
	'Object' => '/var/www/c-it-loci/lib/Cake/Core/Object.php',
	'ComponentCollection' => '/var/www/c-it-loci/lib/Cake/Controller/ComponentCollection.php',
	'SessionComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/SessionComponent.php',
	'Component' => '/var/www/c-it-loci/lib/Cake/Controller/Component.php',
	'RequestHandlerComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/RequestHandlerComponent.php',
	'ClassRegistry' => '/var/www/c-it-loci/lib/Cake/Utility/ClassRegistry.php',
	'Region' => '/var/www/c-it-loci/app/Model/Region.php',
	'AppModel' => '/var/www/c-it-loci/app/Model/AppModel.php',
	'Model' => '/var/www/c-it-loci/lib/Cake/Model/Model.php',
	'BehaviorCollection' => '/var/www/c-it-loci/lib/Cake/Model/BehaviorCollection.php',
	'ConnectionManager' => '/var/www/c-it-loci/lib/Cake/Model/ConnectionManager.php',
	'Mysql' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/Database/Mysql.php',
	'DboSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DboSource.php',
	'DataSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DataSource.php',
	'I18n' => '/var/www/c-it-loci/lib/Cake/I18n/I18n.php',
	'L10n' => '/var/www/c-it-loci/lib/Cake/I18n/L10n.php',
	'CakeSession' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/CakeSession.php',
	'View' => '/var/www/c-it-loci/lib/Cake/View/View.php',
	'HelperCollection' => '/var/www/c-it-loci/lib/Cake/View/HelperCollection.php',
	'ViewBlock' => '/var/www/c-it-loci/lib/Cake/View/ViewBlock.php',
	'HtmlHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/HtmlHelper.php',
	'AppHelper' => '/var/www/c-it-loci/app/View/Helper/AppHelper.php',
	'Helper' => '/var/www/c-it-loci/lib/Cake/View/Helper.php',
	'FormHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/FormHelper.php',
	'SessionHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/SessionHelper.php'
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
App::shutdown() - CORE/Cake/Core/App.php, line 899
[main] - [internal], line ??

Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'method_cache'
$value = array(
	(int) 0 => false,
	'name' => array(
		'45b989c52610ac6d773f6b83d6108190' => '`citloci`'
	)
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DboSource::__destruct() - CORE/Cake/Model/Datasource/DboSource.php, line 3539
[main] - [internal], line ??

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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