C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000QR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000228300-ENSG00000099617 CGP 9606 19:1275438-1300237
GeneTranscriptPositionBiotype
ENSG00000099617 (EFNA2)
ephrin-A2
ENST00000215368 (EFNA2-001) 1286154-1300237 protein_coding
ENSG00000228300 (C19orf24)
chromosome 19 open reading frame 24
ENST00000409293 (C19orf24-001) 1275438-1279249 protein_coding
ENST00000469144 (C19orf24-003) 1276021-1279244 protein_coding
ENST00000485191 (C19orf24-004) 1276093-1279244 retained_intron
ENST00000585716 (C19orf24-006) 1276876-1279244 processed_transcript
ENST00000590269 (C19orf24-005) 1276100-1278836 processed_transcript
CIL_0000QR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035595-ENSMUSG00000003070 CGP 10090 10:80172944-80190010
GeneTranscriptPositionBiotype
ENSMUSG00000003070 (Efna2)
ephrin A2
ENSMUST00000003154 (Efna2-001) 80179482-80190010 protein_coding
ENSMUSG00000035595 (1600002K03Rik)
RIKEN cDNA 1600002K03 gene
ENSMUST00000041882 (1600002K03Rik-001) 80172944-80175146 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QR_0001ENSG00000099617ENST00000215368ENSG00000228300ENST00000409293ENST00000469144ENST00000485191ENST00000585716ENST00000590269CIL_0000QR_0002ENSMUSG00000003070ENSMUST00000003154ENSMUSG00000035595ENSMUST00000041882
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QR_0001ENSG00000099617ENST00000215368ENSG00000228300ENST00000409293ENST00000469144ENST00000485191ENST00000585716ENST00000590269CIL_0000QR_0002ENSMUSG00000003070ENSMUST00000003154ENSMUSG00000035595ENSMUST00000041882
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099617 ENST00000215368 N/A N/A N/A 0.331±0.00 N/A 1.368±0.32 N/A 0.282±0.00 4.539±0.00 N/A N/A 1.134±0.82 0.322±0.17 0.918±0.23
ENSG00000228300 ENST00000409293 11.444±0.00 31.840±0.00 0.179±0.00 3.345±2.16 13.555±12.56 7.616±7.06 3.503±3.15 10.517±7.51 39.374±0.00 15.677±0.00 3.985±3.19 17.883±6.21 27.303±4.76 13.569±2.70
ENST00000469144 14.611±0.00 20.401±0.00 N/A 1.959±1.52 9.354±0.00 6.031±0.00 N/A 7.996±0.00 N/A 0.695±0.00 0.862±0.00 10.076±7.49 14.927±1.90 15.169±10.01
ENST00000485191 N/A N/A N/A N/A 0.232±0.00 N/A N/A N/A N/A N/A N/A 0.706±0.47 N/A N/A
ENST00000585716 N/A N/A 1.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590269 N/A N/A N/A N/A N/A N/A N/A 0.525±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003070 ENSMUST00000003154 4.124±1.31 5.061±1.60 1.582±0.32 16.952±11.26 3.225±1.47 1.410±0.23 0.639±0.18 0.697±0.14 0.227±0.15 1.796±0.27 0.121±0.03 7.519±3.80 0.904±0.14 0.554±0.25
ENSMUSG00000035595 ENSMUST00000041882 6.063±0.00 18.079±0.00 N/A 4.035±0.00 5.662±3.54 7.875±1.74 N/A N/A 5.888±2.08 N/A 5.891±0.54 9.039±2.41 11.141±2.16 1.540±0.00

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