C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000QZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154611-ENSG00000141384 CGP 9606 18:26133852-26391685
GeneTranscriptPositionBiotype
ENSG00000141384 (TAF4B)
TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa 		ENST00000269142 (TAF4B-002) 26225936-26391685 protein_coding
ENST00000400466 (TAF4B-201) 26226445-26391678 protein_coding
ENST00000418698 (TAF4B-003) 26226883-26391683 nonsense_mediated_decay
ENST00000578121 (TAF4B-001) 26226486-26390164 protein_coding
ENSG00000154611 (PSMA8)
proteasome (prosome, macropain) subunit, alpha type, 8 		ENST00000308268 (PSMA8-001) 26133877-26193355 protein_coding
ENST00000343848 (PSMA8-003) 26133874-26193355 protein_coding
ENST00000415576 (PSMA8-002) 26133852-26192824 protein_coding
ENST00000538664 (PSMA8-004) 26133852-26193355 nonsense_mediated_decay
ENST00000612461 (PSMA8-201) 26140086-26193355 protein_coding
ENSG00000188985 (DHFRP1)
dihydrofolate reductase pseudogene 1 		ENST00000579682 (DHFRP1-001) 26170726-26171284 processed_pseudogene
ENSG00000207160 (RNU6-1289P)
RNA, U6 small nuclear 1289, pseudogene 		ENST00000384431 (RNU6-1289P-201) 26366301-26366406 snRNA
ENSG00000263829 (FAM60BP)
family with sequence similarity 60, member B pseudogene 		ENST00000578364 (FAM60BP-001) 26255698-26256355 processed_pseudogene
ENSG00000264911 (RP11-107K17.2)
 ENST00000582910 (RP11-107K17.2-001) 26348347-26349004 processed_pseudogene
ENSG00000266227 (NPM1P2)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 2 		ENST00000578162 (NPM1P2-001) 26204869-26205904 processed_pseudogene
ENSG00000266237 (RP11-25D3.1)
 ENST00000580975 (RP11-25D3.1-001) 26266009-26267409 sense_intronic
CIL_0000QZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036743-ENSMUSG00000054321 CGP 10090 18:14706151-14900359
GeneTranscriptPositionBiotype
ENSMUSG00000036743 (Psma8)
proteasome (prosome, macropain) subunit, alpha type, 8 		ENSMUST00000040860 (Psma8-201) 14706151-14762299 protein_coding
ENSMUSG00000054321 (Taf4b)
TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor 		ENSMUST00000169862 (Taf4b-201) 14783245-14900359 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QZ_0001ENSG00000141384ENST00000269142ENST00000400466ENST00000418698ENST00000578121ENSG00000154611ENST00000308268ENST00000343848ENST00000415576ENST00000538664ENST00000612461ENSG00000188985ENST00000579682ENSG00000207160ENST00000384431ENSG00000263829ENST00000578364ENSG00000264911ENST00000582910ENSG00000266227ENST00000578162ENSG00000266237ENST00000580975CIL_0000QZ_0002ENSMUSG00000036743ENSMUST00000040860ENSMUSG00000054321ENSMUST00000169862
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QZ_0001ENSG00000141384ENST00000269142ENST00000400466ENST00000418698ENST00000578121ENSG00000154611ENST00000308268ENST00000343848ENST00000415576ENST00000612461ENSG00000188985ENST00000579682ENSG00000207160ENST00000384431ENSG00000263829ENST00000578364ENSG00000264911ENST00000582910ENSG00000266227ENST00000578162ENSG00000266237ENST00000580975CIL_0000QZ_0002ENSMUSG00000036743ENSMUST00000040860ENSMUSG00000054321ENSMUST00000169862
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141384 ENST00000269142 N/A N/A N/A 0.340±0.00 0.137±0.00 N/A N/A N/A N/A N/A N/A 0.832±0.00 N/A N/A
ENST00000400466 0.963±0.00 1.986±0.00 N/A 0.835±0.00 0.714±0.00 1.006±0.00 0.400±0.00 0.537±0.00 0.061±0.00 N/A 1.255±0.00 0.714±0.42 0.890±0.50 3.177±0.65
ENST00000418698 0.130±0.00 1.307±0.00 0.422±0.00 0.182±0.00 0.400±0.00 0.451±0.00 0.054±0.00 0.606±0.00 N/A 0.755±0.10 0.436±0.00 0.521±0.03 0.751±0.11 1.121±0.21
ENST00000578121 N/A N/A N/A 1.351±0.00 N/A N/A 0.160±0.00 0.060±0.00 0.429±0.00 0.517±0.00 N/A 0.852±0.60 0.430±0.16 1.966±0.00
ENSG00000154611 ENST00000308268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A 1.029±0.00
ENST00000343848 0.045±0.00 0.073±0.00 N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A 0.011±0.00 0.074±0.00 1.265±0.00
ENST00000415576 N/A N/A N/A 0.039±0.00 0.070±0.02 N/A N/A N/A N/A N/A N/A 0.029±0.00 0.245±0.14 7.968±5.83
ENST00000538664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.01 0.122±0.06 3.044±0.97
ENSG00000188985 ENST00000579682 N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A 0.635±0.60 N/A N/A
ENSG00000207160 ENST00000384431 N/A 0.546±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263829 ENST00000578364 N/A N/A N/A 0.118±0.06 N/A 0.019±0.00 N/A N/A N/A 0.435±0.00 N/A 0.197±0.00 N/A 0.074±0.00
ENSG00000264911 ENST00000582910 N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.07 0.056±0.00 N/A
ENSG00000266227 ENST00000578162 0.013±0.00 0.027±0.00 N/A N/A 0.013±0.00 0.025±0.00 N/A 0.081±0.00 N/A N/A 0.037±0.00 0.015±0.00 N/A 0.048±0.00
ENSG00000266237 ENST00000580975 0.232±0.00 0.221±0.00 N/A 0.096±0.00 0.121±0.00 0.119±0.11 0.082±0.00 0.199±0.00 0.044±0.00 0.356±0.30 N/A 0.286±0.45 N/A 0.148±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036743 ENSMUST00000040860 0.144±0.02 0.279±0.14 0.072±0.02 0.086±0.03 0.080±0.04 0.106±0.04 0.125±0.10 0.084±0.08 0.511±0.15 0.194±0.06 0.023±0.00 0.665±0.37 0.098±0.05 28.959±7.46
ENSMUSG00000054321 ENSMUST00000169862 1.247±0.56 3.256±0.59 0.482±0.25 0.215±0.10 1.853±0.92 1.304±0.17 0.360±0.14 0.579±0.39 0.376±0.16 1.560±0.33 0.275±0.08 4.569±2.80 1.045±0.39 2.585±1.05

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