C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000R3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198105-ENSG00000175395 CGP 9606 10:37776526-37976633
GeneTranscriptPositionBiotype
ENSG00000151963 (RP11-775A3.1)
 ENST00000406795 (RP11-775A3.1-001) 37883594-37884109 unprocessed_pseudogene
ENSG00000175395 (ZNF25)
zinc finger protein 25 		ENST00000302609 (ZNF25-001) 37949572-37976633 protein_coding
ENST00000374633 (ZNF25-002) 37950567-37976627 processed_transcript
ENST00000467975 (ZNF25-003) 37953063-37976592 processed_transcript
ENSG00000198105 (ZNF248)
zinc finger protein 248 		ENST00000357328 (ZNF248-201) 37828765-37858084 protein_coding
ENST00000374648 (ZNF248-005) 37830856-37857558 protein_coding
ENST00000395867 (ZNF248-004) 37828765-37857610 protein_coding
ENST00000395873 (ZNF248-002) 37833055-37858037 protein_coding
ENST00000395874 (ZNF248-001) 37837646-37858106 protein_coding
ENST00000485560 (ZNF248-006) 37802823-37857551 nonsense_mediated_decay
ENST00000494133 (ZNF248-003) 37829278-37838111 processed_transcript
ENST00000611278 (ZNF248-202) 37828765-37857636 protein_coding
ENST00000615949 (ZNF248-203) 37776526-37857636 protein_coding
ENSG00000225192 (ZNF33BP1)
zinc finger protein 33B pseudogene 1 		ENST00000452497 (ZNF33BP1-001) 37794276-37796109 processed_pseudogene
ENSG00000226578 (RP11-258F22.1)
 ENST00000432530 (RP11-258F22.1-001) 37775371-37784131 lincRNA
ENSG00000228828 (RP11-162G10.1)
 ENST00000414066 (RP11-162G10.1-001) 37818606-37820982 processed_pseudogene
ENSG00000235197 (ZNF33AP1)
zinc finger protein 33A pseudogene 1 		ENST00000432492 (ZNF33AP1-001) 37894637-37896666 processed_pseudogene
ENSG00000260137 (RP11-258F22.2)
 ENST00000564417 (RP11-258F22.2-001) 37791580-37791937 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0000R3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030145-ENSMUSG00000072623 CGP 10090 6:118427319-118479320
GeneTranscriptPositionBiotype
ENSMUSG00000030145 (Zfp248)
zinc finger protein 248 		ENSMUST00000069292 (Zfp248-001) 118427319-118455528 protein_coding
ENSMUST00000159254 (Zfp248-006) 118453168-118454756 processed_transcript
ENSMUST00000159403 (Zfp248-004) 118433383-118455065 protein_coding
ENSMUST00000161176 (Zfp248-003) 118453132-118455471 retained_intron
ENSMUST00000161519 (Zfp248-002) 118428687-118455498 protein_coding
ENSMUST00000162275 (Zfp248-005) 118433305-118455419 processed_transcript
ENSMUST00000189168 (Zfp248-007) 118453099-118455502 retained_intron
ENSMUSG00000072623 (Zfp9)
zinc finger protein 9 		ENSMUST00000161170 (Zfp9-001) 118461950-118479320 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R3_0001ENSG00000151963ENST00000406795ENSG00000175395ENST00000302609ENST00000374633ENST00000467975ENSG00000198105ENST00000357328ENST00000374648ENST00000395867ENST00000395873ENST00000395874ENST00000485560ENST00000494133ENST00000611278ENST00000615949ENSG00000225192ENST00000452497ENSG00000226578ENST00000432530ENSG00000228828ENST00000414066ENSG00000235197ENST00000432492ENSG00000260137ENST00000564417CIL_0000R3_0002ENSMUSG00000030145ENSMUST00000069292ENSMUST00000159254ENSMUST00000159403ENSMUST00000161176ENSMUST00000161519ENSMUST00000162275ENSMUST00000189168ENSMUSG00000072623ENSMUST00000161170
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R3_0001ENSG00000151963ENST00000406795ENSG00000175395ENST00000302609ENST00000374633ENST00000467975ENSG00000198105ENST00000357328ENST00000395867ENST00000395873ENST00000485560ENST00000494133ENST00000611278ENST00000615949ENSG00000225192ENST00000452497ENSG00000226578ENST00000432530ENSG00000228828ENST00000414066ENSG00000235197ENST00000432492ENSG00000260137ENST00000564417CIL_0000R3_0002ENSMUSG00000030145ENSMUST00000069292ENSMUST00000161519ENSMUST00000189168ENSMUSG00000072623ENSMUST00000161170
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151963 ENST00000406795 N/A 0.285±0.00 N/A N/A 0.074±0.00 0.067±0.00 N/A N/A 0.377±0.00 N/A 0.433±0.00 N/A N/A 0.562±0.31
ENSG00000175395 ENST00000302609 N/A 3.473±0.00 1.145±0.00 3.083±1.77 1.084±0.00 2.514±1.24 1.107±0.00 0.271±0.00 1.196±0.60 2.265±0.00 2.177±0.00 1.236±0.85 0.491±0.15 1.640±1.15
ENST00000374633 N/A N/A N/A N/A N/A N/A N/A N/A 1.332±0.00 0.343±0.00 N/A N/A 0.300±0.00 1.493±0.00
ENST00000467975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.545±0.00 0.633±0.00 3.872±0.00
ENSG00000198105 ENST00000357328 N/A N/A 0.722±0.00 1.632±0.00 N/A 0.732±0.15 0.698±0.30 0.944±0.51 0.955±0.00 N/A 0.381±0.00 2.120±0.06 0.346±0.15 N/A
ENST00000374648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395867 0.444±0.00 0.403±0.00 N/A 1.789±0.41 0.988±0.65 1.505±0.70 1.343±0.00 0.567±0.00 1.620±1.27 0.955±0.27 0.631±0.27 1.605±0.55 0.541±0.00 1.236±0.31
ENST00000395873 N/A N/A N/A N/A N/A N/A N/A 3.058±0.00 N/A N/A N/A N/A N/A N/A
ENST00000395874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485560 N/A 0.871±0.00 N/A N/A N/A N/A 1.016±0.00 N/A N/A N/A N/A N/A 0.533±0.00 N/A
ENST00000494133 N/A N/A N/A N/A N/A N/A N/A 2.243±0.00 N/A 1.488±0.00 1.963±0.00 N/A 0.883±0.00 N/A
ENST00000611278 N/A 0.460±0.00 0.706±0.00 N/A 0.463±0.00 0.996±0.00 N/A 0.617±0.00 N/A N/A N/A 0.767±0.15 N/A 1.076±0.00
ENST00000615949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.085±0.00
ENSG00000225192 ENST00000452497 N/A 0.190±0.00 0.340±0.00 0.110±0.03 0.198±0.18 0.402±0.00 0.048±0.03 0.049±0.00 0.676±0.00 0.592±0.00 0.013±0.00 0.204±0.23 0.016±0.00 0.080±0.07
ENSG00000226578 ENST00000432530 N/A 2.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228828 ENST00000414066 0.015±0.00 0.157±0.00 0.719±0.00 0.369±0.00 0.450±0.36 0.893±0.00 0.164±0.13 0.269±0.24 N/A 0.274±0.23 0.159±0.00 0.457±0.54 0.094±0.00 0.241±0.16
ENSG00000235197 ENST00000432492 N/A N/A N/A 0.048±0.00 0.029±0.00 N/A 0.007±0.00 0.022±0.00 N/A N/A N/A 0.019±0.00 N/A 0.083±0.00
ENSG00000260137 ENST00000564417 N/A 0.150±0.00 N/A N/A N/A 2.029±0.00 N/A N/A N/A N/A N/A N/A N/A 0.052±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030145 ENSMUST00000069292 0.252±0.07 0.753±0.16 0.372±0.01 1.616±1.42 0.436±0.19 0.291±0.14 N/A 0.257±0.11 0.200±0.11 0.326±0.16 0.102±0.02 0.919±0.53 0.531±0.34 0.309±0.00
ENSMUST00000159254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161519 N/A N/A N/A 0.636±0.00 0.209±0.00 0.171±0.00 0.183±0.03 N/A 0.216±0.00 N/A 0.109±0.02 0.833±0.08 0.843±0.35 N/A
ENSMUST00000162275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189168 N/A 11.182±1.20 N/A N/A 1.315±0.29 0.574±0.41 N/A 0.928±0.00 0.086±0.03 0.361±0.01 N/A 0.729±0.00 N/A 2.724±0.84
ENSMUSG00000072623 ENSMUST00000161170 2.200±1.10 1.336±0.15 4.196±0.25 3.977±0.43 1.021±0.37 1.093±0.23 1.102±0.19 0.378±0.14 0.931±0.45 1.365±0.23 1.564±0.42 1.835±0.45 2.289±0.93 0.225±0.08

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