C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000S8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136280-ENSG00000136274 CGP 9606 7:44999475-45088914
GeneTranscriptPositionBiotype
ENSG00000136274 (NACAD)
NAC alpha domain containing 		ENST00000460409 (NACAD-002) 45080979-45081400 retained_intron
ENST00000490531 (NACAD-001) 45080438-45088914 protein_coding
ENSG00000136280 (CCM2)
cerebral cavernous malformation 2 		ENST00000258781 (CCM2-001) 45000185-45076467 protein_coding
ENST00000381112 (CCM2-201) 45027634-45076469 protein_coding
ENST00000461377 (CCM2-003) 44999475-45076352 processed_transcript
ENST00000470837 (CCM2-015) 45072338-45073562 retained_intron
ENST00000472223 (CCM2-007) 45027701-45070557 processed_transcript
ENST00000474617 (CCM2-016) 45027672-45076431 protein_coding
ENST00000475551 (CCM2-002) 45027026-45076451 protein_coding
ENST00000476594 (CCM2-013) 45038261-45064622 processed_transcript
ENST00000477605 (CCM2-005) 45067636-45076437 retained_intron
ENST00000478169 (CCM2-011) 45027015-45064494 processed_transcript
ENST00000478582 (CCM2-012) 45000189-45073519 processed_transcript
ENST00000480382 (CCM2-014) 45068494-45072786 protein_coding
ENST00000480658 (CCM2-008) 45027672-45073288 retained_intron
ENST00000481194 (CCM2-004) 45064603-45076453 retained_intron
ENST00000482714 (CCM2-006) 45027672-45071180 processed_transcript
ENST00000488727 (CCM2-010) 45000249-45076414 nonsense_mediated_decay
ENST00000492883 (CCM2-009) 45027672-45073166 retained_intron
ENST00000541586 (CCM2-202) 45000188-45076469 protein_coding
ENST00000544363 (CCM2-203) 45000188-45076469 protein_coding
CIL_0000S8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000378-ENSMUSG00000041073 CGP 10090 11:6546887-6606053
GeneTranscriptPositionBiotype
ENSMUSG00000000378 (Ccm2)
cerebral cavernous malformation 2 		ENSMUST00000000388 (Ccm2-001) 6546887-6596744 protein_coding
ENSMUST00000109721 (Ccm2-201) 6561230-6596742 protein_coding
ENSMUST00000109722 (Ccm2-002) 6560183-6596734 protein_coding
ENSMUST00000144293 (Ccm2-003) 6561121-6562952 processed_transcript
ENSMUST00000159007 (Ccm2-005) 6546910-6589474 protein_coding
ENSMUST00000160633 (Ccm2-006) 6561134-6593070 protein_coding
ENSMUST00000161501 (Ccm2-004) 6561112-6593133 nonsense_mediated_decay
ENSMUST00000161667 (Ccm2-007) 6593048-6594269 retained_intron
ENSMUSG00000041073 (Nacad)
NAC alpha domain containing 		ENSMUST00000045713 (Nacad-001) 6597823-6606053 protein_coding
ENSMUST00000177050 (Nacad-002) 6597892-6599392 nonsense_mediated_decay
ENSMUST00000177391 (Nacad-003) 6597903-6599938 nonsense_mediated_decay
ENSMUSG00000084231 (Gm11975)
predicted gene 11975 		ENSMUST00000118772 (Gm11975-001) 6559023-6559503 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000S8_0001ENSG00000136274ENST00000460409ENST00000490531ENSG00000136280ENST00000258781ENST00000381112ENST00000461377ENST00000470837ENST00000472223ENST00000474617ENST00000475551ENST00000476594ENST00000477605ENST00000478169ENST00000478582ENST00000480382ENST00000480658ENST00000481194ENST00000482714ENST00000488727ENST00000492883ENST00000541586ENST00000544363CIL_0000S8_0002ENSMUSG00000000378ENSMUST00000000388ENSMUST00000109721ENSMUST00000109722ENSMUST00000144293ENSMUST00000159007ENSMUST00000160633ENSMUST00000161501ENSMUST00000161667ENSMUSG00000041073ENSMUST00000045713ENSMUST00000177050ENSMUST00000177391ENSMUSG00000084231ENSMUST00000118772
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000S8_0001ENSG00000136274ENST00000460409ENST00000490531ENSG00000136280ENST00000258781ENST00000381112ENST00000461377ENST00000470837ENST00000474617ENST00000475551ENST00000477605ENST00000481194ENST00000488727ENST00000541586CIL_0000S8_0002ENSMUSG00000000378ENSMUST00000000388ENSMUST00000109721ENSMUST00000160633ENSMUSG00000041073ENSMUST00000045713ENSMUST00000177050ENSMUST00000177391ENSMUSG00000084231ENSMUST00000118772
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136274 ENST00000460409 N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A
ENST00000490531 1.408±0.00 0.604±0.00 0.255±0.00 16.848±14.31 0.627±0.51 2.196±1.93 0.729±0.68 1.114±0.00 0.252±0.23 1.482±1.40 0.481±0.40 3.352±3.24 1.516±0.31 2.928±0.92
ENSG00000136280 ENST00000258781 N/A N/A 0.141±0.00 2.510±0.00 N/A N/A 4.604±0.00 1.934±0.00 3.413±2.91 N/A 16.281±0.00 15.016±6.01 16.493±9.97 31.937±0.00
ENST00000381112 N/A N/A N/A N/A N/A 0.729±0.00 N/A N/A 0.389±0.00 N/A N/A N/A N/A N/A
ENST00000461377 N/A N/A 0.153±0.00 1.656±0.00 1.311±0.00 N/A 1.998±0.00 N/A N/A 1.297±0.00 N/A N/A N/A 3.912±0.00
ENST00000470837 N/A N/A N/A N/A N/A N/A N/A 2.255±0.00 N/A N/A N/A N/A N/A N/A
ENST00000472223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474617 N/A N/A N/A N/A N/A N/A N/A N/A 0.547±0.00 N/A 4.173±0.00 N/A N/A N/A
ENST00000475551 N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A 0.416±0.00 N/A 0.929±0.00 N/A N/A N/A
ENST00000476594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477605 N/A N/A N/A N/A N/A 0.459±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481194 N/A 1.902±0.00 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488727 5.261±0.00 7.801±0.00 N/A 10.260±0.00 12.509±0.00 10.499±0.00 3.131±0.00 9.847±0.00 10.366±0.00 11.644±0.00 1.954±0.00 2.075±0.00 4.716±0.00 13.220±0.00
ENST00000492883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541586 10.151±0.00 19.841±0.00 N/A 6.645±0.00 18.769±0.00 9.399±0.00 N/A 8.569±0.00 25.479±0.00 16.175±0.00 N/A 11.007±4.75 13.241±0.71 11.940±0.00
ENST00000544363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000378 ENSMUST00000000388 9.037±3.11 N/A 27.111±2.41 17.806±5.34 7.635±1.38 4.193±0.35 7.326±0.72 6.901±2.90 12.445±9.46 5.557±0.73 6.939±1.33 10.980±4.03 29.060±10.02 3.322±1.17
ENSMUST00000109721 29.763±6.10 22.375±0.86 N/A 10.688±6.73 46.049±24.73 30.070±2.06 7.310±3.05 11.453±4.59 12.792±2.25 28.145±0.47 3.392±0.64 37.616±15.08 16.783±4.16 2.183±1.71
ENSMUST00000109722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160633 N/A N/A N/A N/A N/A N/A N/A N/A 5.018±0.00 N/A N/A 7.254±0.00 14.289±0.00 N/A
ENSMUST00000161501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041073 ENSMUST00000045713 2.068±1.13 0.195±0.10 5.306±0.64 23.417±11.16 0.832±0.00 4.014±1.12 0.410±0.10 0.436±0.11 0.131±0.14 0.529±0.32 0.102±0.01 1.079±0.58 3.941±2.66 0.174±0.09
ENSMUST00000177050 N/A N/A N/A 10.701±0.00 N/A N/A N/A N/A 2.302±1.78 N/A 0.584±0.30 1.988±0.17 18.974±0.00 0.802±0.00
ENSMUST00000177391 N/A N/A N/A 11.449±0.00 N/A N/A N/A N/A 0.517±0.42 N/A 0.247±0.00 N/A 2.811±1.67 0.297±0.00
ENSMUSG00000084231 ENSMUST00000118772 0.762±0.32 0.292±0.00 0.141±0.01 0.329±0.11 0.752±0.24 0.425±0.14 0.296±0.14 0.195±0.09 0.148±0.10 0.328±0.04 N/A 0.594±0.13 0.308±0.09 0.109±0.01

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