C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000SB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196262-ENSG00000105968 CGP 9606 7:44796680-44848083
GeneTranscriptPositionBiotype
ENSG00000105968 (H2AFV)
H2A histone family, member V 		ENST00000222690 (H2AFV-001) 44826791-44848077 protein_coding
ENST00000308153 (H2AFV-002) 44834228-44848063 protein_coding
ENST00000349299 (H2AFV-004) 44834228-44848021 protein_coding
ENST00000350771 (H2AFV-003) 44834228-44848076 protein_coding
ENST00000381124 (H2AFV-007) 44834239-44848080 protein_coding
ENST00000437072 (H2AFV-005) 44829897-44848082 protein_coding
ENST00000446531 (H2AFV-006) 44834925-44848083 protein_coding
ENST00000521529 (H2AFV-008) 44834310-44848040 protein_coding
ENSG00000196262 (PPIA)
peptidylprolyl isomerase A (cyclophilin A) 		ENST00000355968 (PPIA-002) 44796681-44801631 protein_coding
ENST00000415933 (PPIA-007) 44796682-44801624 nonsense_mediated_decay
ENST00000451562 (PPIA-006) 44796680-44800011 protein_coding
ENST00000468812 (PPIA-001) 44796680-44803117 protein_coding
ENST00000479021 (PPIA-009) 44796681-44824564 nonsense_mediated_decay
ENST00000480603 (PPIA-008) 44798814-44801624 processed_transcript
ENST00000481437 (PPIA-005) 44796680-44799816 retained_intron
ENST00000489459 (PPIA-003) 44796681-44801630 protein_coding
ENST00000494484 (PPIA-004) 44797973-44801647 retained_intron
ENST00000620047 (PPIA-201) 44796681-44801631 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0000SB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071866-ENSMUSG00000041126 CGP 10090 11:6415443-6444443
GeneTranscriptPositionBiotype
ENSMUSG00000041126 (H2afv)
H2A histone family, member V 		ENSMUST00000093346 (H2afv-002) 6428138-6444352 protein_coding
ENSMUST00000109737 (H2afv-001) 6427229-6444443 protein_coding
ENSMUSG00000071866 (Ppia)
peptidylprolyl isomerase A 		ENSMUST00000090749 (Ppia-005) 6415870-6419815 processed_transcript
ENSMUST00000132846 (Ppia-001) 6415443-6419817 protein_coding
ENSMUST00000135789 (Ppia-004) 6415868-6418437 retained_intron
ENSMUST00000137829 (Ppia-002) 6415876-6419663 retained_intron
ENSMUST00000155824 (Ppia-003) 6415876-6419812 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SB_0001ENSG00000105968ENST00000222690ENST00000308153ENST00000349299ENST00000350771ENST00000381124ENST00000437072ENST00000446531ENST00000521529ENSG00000196262ENST00000355968ENST00000415933ENST00000451562ENST00000468812ENST00000479021ENST00000480603ENST00000481437ENST00000489459ENST00000494484ENST00000620047CIL_0000SB_0002ENSMUSG00000041126ENSMUST00000093346ENSMUST00000109737ENSMUSG00000071866ENSMUST00000090749ENSMUST00000132846ENSMUST00000135789ENSMUST00000137829ENSMUST00000155824
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SB_0001ENSG00000105968ENST00000222690ENST00000308153ENST00000349299ENST00000350771ENST00000521529ENSG00000196262ENST00000355968ENST00000415933ENST00000451562ENST00000468812ENST00000489459CIL_0000SB_0002ENSMUSG00000041126ENSMUST00000093346ENSMUST00000109737ENSMUSG00000071866ENSMUST00000090749ENSMUST00000132846ENSMUST00000135789ENSMUST00000137829ENSMUST00000155824
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105968 ENST00000222690 5.940±0.00 10.158±0.00 N/A 23.351±0.00 10.847±0.00 10.106±0.00 9.490±0.00 11.622±0.00 9.806±0.00 10.043±0.00 9.559±3.40 10.852±2.88 5.726±0.59 8.721±0.64
ENST00000308153 N/A N/A 6.389±0.00 12.336±0.00 18.229±8.04 27.124±15.05 N/A 10.766±0.00 N/A 20.778±10.14 N/A 34.819±15.49 33.130±9.42 31.344±10.18
ENST00000349299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.869±0.00 N/A N/A N/A
ENST00000350771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.062±0.00 18.649±0.00 N/A
ENST00000381124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 52.124±0.00 20.667±0.00 34.776±0.00
ENSG00000196262 ENST00000355968 124.332±0.00 280.588±0.00 46.026±0.00 324.302±39.40 143.531±33.16 183.257±31.41 58.817±41.29 220.912±89.74 138.137±73.84 218.902±106.90 56.025±36.84 242.492±182.40 409.003±87.99 118.519±51.80
ENST00000415933 N/A N/A N/A N/A N/A N/A 26.995±0.00 N/A 65.354±0.00 104.430±0.00 19.535±0.00 213.600±107.87 256.983±146.67 N/A
ENST00000451562 N/A N/A 17.702±0.00 N/A 39.884±0.00 N/A 4.605±0.00 N/A N/A N/A N/A 59.906±0.00 N/A N/A
ENST00000468812 13.491±0.00 37.660±0.00 N/A 22.484±0.00 15.469±0.00 9.339±0.00 1.528±0.00 20.012±0.00 6.518±0.00 N/A 8.194±0.00 17.179±0.00 N/A 10.632±0.00
ENST00000479021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.887±0.00 155.442±130.91 N/A 60.349±0.00
ENST00000494484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041126 ENSMUST00000093346 18.648±7.24 N/A 23.831±0.87 45.909±10.72 12.326±1.62 N/A 15.127±1.03 19.192±1.66 27.864±4.17 N/A 15.512±1.41 75.022±48.67 35.656±21.09 12.022±8.36
ENSMUST00000109737 22.218±10.37 23.708±4.44 22.729±4.60 35.256±23.47 15.641±10.18 44.772±9.84 15.211±2.68 30.165±8.96 22.927±5.40 36.092±8.26 11.405±1.37 47.963±26.70 8.057±6.65 4.855±2.49
ENSMUSG00000071866 ENSMUST00000090749 249.192±40.30 124.347±13.60 375.276±161.76 421.922±99.78 276.404±85.48 151.733±25.35 85.884±15.64 376.608±29.56 358.603±204.23 186.010±13.31 N/A 310.152±208.24 575.307±255.06 171.181±34.12
ENSMUST00000132846 198.962±30.11 6.587±0.49 525.565±284.54 362.855±115.94 47.991±16.25 28.781±5.27 33.865±7.44 95.590±16.51 459.131±407.85 57.814±20.15 108.008±13.98 44.315±38.40 351.133±243.21 79.158±7.21
ENSMUST00000135789 N/A 69.827±9.36 N/A 702.191±0.00 N/A N/A N/A N/A 106.251±15.97 N/A N/A 583.892±0.00 960.224±345.40 437.938±0.00
ENSMUST00000137829 N/A N/A N/A N/A N/A 73.671±0.00 N/A N/A 165.370±0.00 57.200±0.00 N/A 81.582±0.00 N/A 48.396±0.00
ENSMUST00000155824 N/A 6.768±1.01 N/A N/A 8.856±0.26 7.026±0.00 N/A N/A N/A N/A N/A 7.937±0.90 N/A 21.778±0.75

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