C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000TE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140022-ENSG00000071537 CGP 9606 14:81260656-81533861
GeneTranscriptPositionBiotype
ENSG00000071537 (SEL1L)
sel-1 suppressor of lin-12-like (C. elegans) 		ENST00000336735 (SEL1L-001) 81471549-81533861 protein_coding
ENST00000554293 (SEL1L-006) 81479278-81484528 retained_intron
ENST00000554744 (SEL1L-007) 81498358-81506155 retained_intron
ENST00000555824 (SEL1L-003) 81498808-81533833 protein_coding
ENST00000555923 (SEL1L-005) 81488797-81490473 retained_intron
ENST00000557372 (SEL1L-004) 81504263-81533849 protein_coding
ENSG00000140022 (STON2)
stonin 2 		ENST00000267540 (STON2-001) 81270507-81398583 protein_coding
ENST00000553821 (STON2-008) 81268048-81276933 protein_coding
ENST00000554710 (STON2-006) 81398373-81436207 protein_coding
ENST00000555226 (STON2-003) 81394950-81418253 retained_intron
ENST00000555284 (STON2-004) 81270429-81278818 retained_intron
ENST00000555447 (STON2-002) 81260656-81427404 protein_coding
ENST00000556280 (STON2-007) 81278476-81323683 processed_transcript
ENST00000557055 (STON2-005) 81396118-81436465 protein_coding
ENST00000614646 (STON2-201) 81261782-81398583 protein_coding
ENSG00000242163 (RP11-299L17.1)
 ENST00000469473 (RP11-299L17.1-001) 81332961-81333361 processed_pseudogene
ENSG00000258605 (DYNLL1P2)
dynein, light chain, LC8-type 1 pseudogene 2 		ENST00000554807 (DYNLL1P2-001) 81412970-81413239 processed_pseudogene
ENSG00000258675 (RP11-299L17.3)
 ENST00000555001 (RP11-299L17.3-001) 81441987-81450157 lincRNA
CIL_0000TE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020961-ENSMUSG00000020964 CGP 10090 12:91638542-91849157
GeneTranscriptPositionBiotype
ENSMUSG00000020961 (Ston2)
stonin 2 		ENSMUST00000052969 (Ston2-001) 91638542-91786436 protein_coding
ENSMUST00000111609 (Ston2-005) 91703413-91713974 processed_transcript
ENSMUST00000164713 (Ston2-003) 91641543-91743855 protein_coding
ENSMUST00000166008 (Ston2-004) 91785801-91788387 processed_transcript
ENSMUST00000166967 (Ston2-007) 91743618-91746084 protein_coding
ENSMUST00000170077 (Ston2-006) 91714082-91779137 protein_coding
ENSMUST00000170984 (Ston2-002) 91735054-91771170 processed_transcript
ENSMUSG00000020964 (Sel1l)
sel-1 suppressor of lin-12-like (C. elegans) 		ENSMUST00000021347 (Sel1l-001) 91806043-91849157 protein_coding
ENSMUST00000165282 (Sel1l-009) 91806065-91813960 processed_transcript
ENSMUST00000166691 (Sel1l-005) 91808643-91849130 retained_intron
ENSMUST00000167466 (Sel1l-006) 91806621-91849129 protein_coding
ENSMUST00000167594 (Sel1l-004) 91819981-91849130 retained_intron
ENSMUST00000169843 (Sel1l-002) 91841458-91849140 retained_intron
ENSMUST00000171465 (Sel1l-008) 91815504-91818248 retained_intron
ENSMUST00000171959 (Sel1l-007) 91824878-91831932 retained_intron
ENSMUST00000172246 (Sel1l-003) 91832175-91849139 retained_intron
ENSMUST00000178462 (Sel1l-201) 91806043-91849157 protein_coding
ENSMUSG00000086689 (Gm16876)
predicted gene, 16876 		ENSMUST00000151945 (Gm16876-001) 91684665-91693590 antisense
ENSMUSG00000090722 (Gm8378)
predicted gene 8378 		ENSMUST00000165070 (Gm8378-003) 91674812-91686068 processed_transcript
ENSMUST00000167777 (Gm8378-002) 91684466-91686113 processed_transcript
ENSMUST00000172047 (Gm8378-001) 91682578-91686113 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TE_0001ENSG00000071537ENST00000336735ENST00000554293ENST00000554744ENST00000555824ENST00000555923ENST00000557372ENSG00000140022ENST00000267540ENST00000553821ENST00000554710ENST00000555226ENST00000555284ENST00000555447ENST00000556280ENST00000557055ENST00000614646ENSG00000242163ENST00000469473ENSG00000258605ENST00000554807ENSG00000258675ENST00000555001CIL_0000TE_0002ENSMUSG00000020961ENSMUST00000052969ENSMUST00000111609ENSMUST00000164713ENSMUST00000166008ENSMUST00000166967ENSMUST00000170077ENSMUST00000170984ENSMUSG00000020964ENSMUST00000021347ENSMUST00000165282ENSMUST00000166691ENSMUST00000167466ENSMUST00000167594ENSMUST00000169843ENSMUST00000171465ENSMUST00000171959ENSMUST00000172246ENSMUST00000178462ENSMUSG00000086689ENSMUST00000151945ENSMUSG00000090722ENSMUST00000165070ENSMUST00000167777ENSMUST00000172047
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TE_0001ENSG00000071537ENST00000336735ENST00000554744ENSG00000140022ENST00000267540ENST00000553821ENST00000555284ENST00000555447ENST00000557055ENST00000614646ENSG00000242163ENST00000469473ENSG00000258605ENST00000554807ENSG00000258675ENST00000555001CIL_0000TE_0002ENSMUSG00000020961ENSMUST00000052969ENSMUST00000164713ENSMUST00000166967ENSMUST00000170077ENSMUSG00000020964ENSMUST00000021347ENSMUST00000166691ENSMUST00000167466ENSMUST00000167594ENSMUST00000169843ENSMUST00000178462ENSMUSG00000086689ENSMUST00000151945ENSMUSG00000090722ENSMUST00000165070ENSMUST00000167777ENSMUST00000172047
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071537 ENST00000336735 10.265±0.00 4.573±0.00 4.780±0.00 7.261±1.68 13.359±0.00 7.405±2.67 4.337±0.21 7.515±1.54 8.895±1.41 6.900±3.42 3.131±1.42 3.764±2.28 4.932±0.90 3.444±0.65
ENST00000554293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.519±0.00 N/A 5.580±0.00
ENST00000555824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140022 ENST00000267540 N/A N/A N/A N/A 0.652±0.00 N/A N/A N/A N/A N/A N/A 0.581±0.00 N/A N/A
ENST00000553821 N/A N/A N/A N/A N/A 0.887±0.00 N/A 1.389±0.00 N/A 3.933±0.00 N/A N/A N/A 1.424±0.00
ENST00000554710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555284 N/A N/A N/A N/A N/A N/A N/A N/A 1.226±0.00 N/A N/A N/A N/A N/A
ENST00000555447 0.728±0.00 N/A N/A 3.023±0.00 0.727±0.00 0.221±0.00 0.109±0.00 1.561±0.00 N/A N/A N/A 0.635±0.21 0.101±0.00 0.315±0.00
ENST00000556280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557055 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.481±0.00 N/A N/A N/A N/A
ENST00000614646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.161±0.00 N/A
ENSG00000242163 ENST00000469473 0.030±0.00 0.093±0.00 0.669±0.00 0.495±0.47 0.060±0.00 0.057±0.00 0.055±0.00 0.061±0.00 0.378±0.00 N/A 0.377±0.00 0.305±0.27 0.471±0.36 0.259±0.18
ENSG00000258605 ENST00000554807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.547±0.00 N/A N/A
ENSG00000258675 ENST00000555001 0.240±0.00 N/A N/A 0.126±0.00 0.272±0.05 0.115±0.00 0.095±0.00 N/A N/A N/A 0.633±0.38 0.811±0.11 0.132±0.07 0.796±0.39
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020961 ENSMUST00000052969 0.686±0.00 0.693±0.20 N/A N/A 1.260±0.46 N/A N/A N/A N/A 1.821±0.00 N/A 3.220±0.97 N/A 2.114±0.00
ENSMUST00000111609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164713 1.024±0.34 N/A N/A N/A 0.653±0.00 1.107±0.00 0.587±0.00 2.468±0.42 1.679±1.27 0.970±0.20 N/A 2.445±0.82 N/A 1.421±0.78
ENSMUST00000166008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166967 N/A 4.138±0.00 N/A N/A 10.413±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170077 N/A 1.588±0.28 N/A N/A 3.364±0.54 5.418±0.93 N/A 9.813±2.36 1.949±0.59 6.308±1.12 N/A 9.714±1.36 N/A N/A
ENSMUST00000170984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020964 ENSMUST00000021347 7.084±1.08 N/A 13.705±1.40 8.140±0.80 4.073±0.93 3.172±0.64 3.550±0.40 5.082±0.71 7.161±1.61 8.637±2.25 7.153±0.50 8.279±5.12 17.769±3.29 2.527±0.99
ENSMUST00000165282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166691 N/A N/A N/A N/A N/A N/A N/A N/A 3.842±0.00 N/A N/A N/A N/A N/A
ENSMUST00000167466 17.165±1.50 25.091±3.19 2.894±0.61 4.230±2.01 13.988±1.31 16.125±1.97 6.945±0.24 10.439±2.02 10.088±7.75 17.483±1.46 1.836±0.45 20.120±8.22 8.141±0.98 4.618±1.94
ENSMUST00000167594 N/A N/A N/A 27.577±0.00 N/A N/A N/A N/A N/A N/A N/A 35.320±0.00 34.640±3.87 7.385±0.00
ENSMUST00000169843 N/A 44.907±8.79 N/A N/A 35.069±1.01 23.733±5.22 N/A N/A N/A 38.440±7.72 N/A 52.227±18.90 N/A N/A
ENSMUST00000171465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178462 N/A 9.356±2.77 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086689 ENSMUST00000151945 0.078±0.00 N/A N/A N/A N/A N/A N/A 0.056±0.00 0.009±0.00 0.098±0.00 N/A N/A 0.039±0.00 0.262±0.16
ENSMUSG00000090722 ENSMUST00000165070 N/A N/A N/A N/A 0.112±0.00 0.140±0.00 N/A N/A 0.108±0.01 N/A N/A 0.272±0.05 0.183±0.08 0.854±0.54
ENSMUST00000167777 0.086±0.02 N/A 0.777±0.00 0.053±0.00 0.272±0.00 0.141±0.03 N/A 0.072±0.03 N/A 0.094±0.02 N/A 0.291±0.19 0.101±0.05 0.043±0.00
ENSMUST00000172047 0.084±0.04 N/A 0.765±0.00 0.392±0.00 0.229±0.07 0.293±0.09 0.067±0.00 0.161±0.11 0.094±0.05 0.168±0.08 N/A 0.276±0.26 0.159±0.06 0.270±0.16

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