C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000TS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074508-ENSDARG00000070787 CGP 7955 11:11718450-11902608
GeneTranscriptPositionBiotype
ENSDARG00000036840 (krt15)
keratin 15 		ENSDART00000025016 (krt15-201) 11637240-11764765 protein_coding
ENSDART00000104254 (krt15-001) 11637154-11639845 protein_coding
ENSDARG00000070787 (jupa)
junction plakoglobin a 		ENSDART00000003891 (jupa-001) 11840951-11902608 protein_coding
ENSDART00000081018 (jupa-201) 11840968-11902606 protein_coding
ENSDART00000146512 (jupa-002) 11898743-11902239 retained_intron
ENSDARG00000074508 (HAP1)
huntingtin-associated protein 1 		ENSDART00000112328 (HAP1-201) 11718450-11746419 protein_coding
CIL_0000TS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173805-ENSG00000173801 CGP 9606 17:41717742-41786931
GeneTranscriptPositionBiotype
ENSG00000173801 (JUP)
junction plakoglobin 		ENST00000310706 (JUP-001) 41754604-41786698 protein_coding
ENST00000393930 (JUP-004) 41754604-41785155 protein_coding
ENST00000393931 (JUP-008) 41754604-41786698 protein_coding
ENST00000420370 (JUP-007) 41767458-41772269 protein_coding
ENST00000424457 (JUP-003) 41768969-41786712 protein_coding
ENST00000437187 (JUP-002) 41767401-41786931 protein_coding
ENST00000437369 (JUP-009) 41769626-41785155 protein_coding
ENST00000449889 (JUP-006) 41767395-41786070 protein_coding
ENST00000465293 (JUP-005) 41771847-41786209 protein_coding
ENST00000585793 (JUP-011) 41758172-41763077 retained_intron
ENST00000589036 (JUP-010) 41771417-41786710 retained_intron
ENST00000591690 (JUP-012) 41769574-41786765 protein_coding
ENSG00000173805 (HAP1)
huntingtin-associated protein 1 		ENST00000310778 (HAP1-006) 41722640-41734644 protein_coding
ENST00000341193 (HAP1-002) 41722640-41734644 protein_coding
ENST00000347901 (HAP1-001) 41722640-41734644 protein_coding
ENST00000393939 (HAP1-007) 41720813-41734644 protein_coding
ENST00000442364 (HAP1-003) 41717742-41725141 protein_coding
ENST00000455021 (HAP1-005) 41717742-41725897 protein_coding
ENST00000458656 (HAP1-004) 41717742-41725081 protein_coding
ENSG00000239542 (RN7SL399P)
RNA, 7SL, cytoplasmic 399, pseudogene 		ENST00000471648 (RN7SL399P-201) 41730127-41730405 misc_RNA
CIL_0000TS_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006930-ENSMUSG00000001552 CGP 10090 11:100347327-100397763
GeneTranscriptPositionBiotype
ENSMUSG00000001552 (Jup)
junction plakoglobin 		ENSMUST00000001592 (Jup-001) 100370619-100397749 protein_coding
ENSMUST00000107403 (Jup-002) 100372296-100397749 protein_coding
ENSMUST00000123903 (Jup-009) 100383404-100386770 processed_transcript
ENSMUST00000124659 (Jup-003) 100368958-100372716 processed_transcript
ENSMUST00000128268 (Jup-008) 100383395-100386741 processed_transcript
ENSMUST00000149798 (Jup-004) 100381297-100383092 processed_transcript
ENSMUST00000151476 (Jup-005) 100371059-100374125 processed_transcript
ENSMUST00000152774 (Jup-006) 100372357-100373308 processed_transcript
ENSMUST00000155746 (Jup-007) 100383315-100397763 processed_transcript
ENSMUSG00000006930 (Hap1)
huntingtin-associated protein 1 		ENSMUST00000103124 (Hap1-001) 100348859-100356087 protein_coding
ENSMUST00000138603 (Hap1-005) 100347327-100356128 protein_coding
ENSMUST00000146878 (Hap1-004) 100352256-100355383 protein_coding
ENSMUST00000173630 (Hap1-002) 100349298-100354040 protein_coding
ENSMUST00000174635 (Hap1-003) 100349418-100351905 protein_coding
ENSMUSG00000091478 (Gm10039)
predicted pseudogene 10039 		ENSMUST00000081241 (Gm10039-001) 100361716-100362126 processed_pseudogene
ENSMUSG00000092509 (Gm20394)
predicted gene 20394 		ENSMUST00000173304 (Gm20394-001) 100349696-100350889 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TS_0001ENSDARG00000036840ENSDART00000025016ENSDART00000104254ENSDARG00000070787ENSDART00000003891ENSDART00000081018ENSDART00000146512ENSDARG00000074508ENSDART00000112328CIL_0000TS_0002ENSG00000173801ENST00000310706ENST00000393930ENST00000393931ENST00000420370ENST00000424457ENST00000437187ENST00000437369ENST00000449889ENST00000465293ENST00000585793ENST00000589036ENST00000591690ENSG00000173805ENST00000310778ENST00000341193ENST00000347901ENST00000393939ENST00000442364ENST00000455021ENST00000458656ENSG00000239542ENST00000471648CIL_0000TS_0003ENSMUSG00000001552ENSMUST00000001592ENSMUST00000107403ENSMUST00000123903ENSMUST00000124659ENSMUST00000128268ENSMUST00000149798ENSMUST00000151476ENSMUST00000152774ENSMUST00000155746ENSMUSG00000006930ENSMUST00000103124ENSMUST00000138603ENSMUST00000146878ENSMUST00000173630ENSMUST00000174635ENSMUSG00000091478ENSMUST00000081241ENSMUSG00000092509ENSMUST00000173304
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TS_0001ENSDARG00000036840ENSDART00000025016ENSDART00000104254ENSDARG00000070787ENSDART00000003891ENSDART00000081018ENSDARG00000074508ENSDART00000112328CIL_0000TS_0002ENSG00000173801ENST00000310706ENST00000393930ENST00000393931ENST00000591690ENSG00000173805ENST00000310778ENST00000341193ENST00000347901ENST00000393939ENST00000458656ENSG00000239542ENST00000471648CIL_0000TS_0003ENSMUSG00000001552ENSMUST00000001592ENSMUST00000107403ENSMUST00000155746ENSMUSG00000006930ENSMUST00000103124ENSMUST00000138603ENSMUST00000146878ENSMUST00000173630ENSMUST00000174635ENSMUSG00000091478ENSMUST00000081241ENSMUSG00000092509ENSMUST00000173304
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036840 ENSDART00000025016 N/A N/A N/A 1.545±0.04 N/A N/A 175.335±15.61 12.267±9.79 0.294±0.00 N/A 5.050±0.00 N/A N/A N/A
ENSDART00000104254 N/A N/A N/A 1.150±1.25 N/A N/A 194.961±13.23 30.766±37.93 0.226±0.00 N/A 16.667±0.00 N/A N/A N/A
ENSDARG00000070787 ENSDART00000003891 N/A N/A N/A 3.758±1.91 N/A N/A 26.253±7.46 15.931±0.00 4.997±0.00 N/A 10.336±0.00 N/A N/A N/A
ENSDART00000081018 N/A N/A N/A 11.252±0.43 N/A N/A 58.528±9.62 46.872±4.87 N/A N/A N/A N/A N/A N/A
ENSDART00000146512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000074508 ENSDART00000112328 N/A N/A N/A 21.103±4.28 N/A N/A 9.609±2.58 2.343±0.15 0.083±0.00 N/A 3.007±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000173801 ENST00000310706 38.771±0.00 10.218±0.00 1.875±0.00 3.574±2.92 16.045±15.08 6.814±0.00 22.072±18.65 27.034±21.36 9.570±7.14 21.503±17.71 37.555±0.00 179.173±163.83 53.569±20.83 6.383±2.92
ENST00000393930 N/A N/A 1.288±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393931 13.900±0.00 7.513±0.00 N/A 1.446±0.00 16.395±0.00 5.821±4.82 9.563±8.33 23.630±0.00 6.577±0.00 14.254±0.00 4.682±0.00 47.627±38.61 24.887±11.20 7.379±0.00
ENST00000420370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591690 N/A N/A N/A N/A N/A N/A N/A N/A 4.878±0.00 N/A N/A N/A N/A N/A
ENSG00000173805 ENST00000310778 N/A N/A N/A 0.949±0.00 N/A N/A N/A N/A N/A N/A N/A 2.828±0.00 0.059±0.00 0.132±0.00
ENST00000341193 N/A N/A 0.045±0.00 1.365±0.78 0.071±0.03 0.159±0.03 N/A N/A N/A 0.134±0.00 N/A 0.934±0.06 0.173±0.11 0.300±0.00
ENST00000347901 N/A N/A N/A N/A N/A N/A N/A 0.268±0.00 N/A N/A N/A 0.767±0.25 N/A 1.158±0.00
ENST00000393939 0.051±0.00 0.079±0.00 N/A N/A 0.178±0.00 0.032±0.00 0.045±0.00 N/A 0.020±0.00 0.081±0.08 0.011±0.01 N/A 0.029±0.00 0.164±0.02
ENST00000442364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458656 N/A N/A N/A N/A N/A 0.322±0.00 N/A 0.312±0.00 N/A 0.031±0.00 N/A N/A N/A N/A
ENSG00000239542 ENST00000471648 0.130±0.00 N/A N/A 0.078±0.00 0.146±0.00 N/A N/A 0.286±0.00 N/A N/A N/A 1.210±0.56 0.346±0.00 0.154±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001552 ENSMUST00000001592 24.965±15.47 35.541±4.49 34.893±7.19 14.633±7.62 29.001±15.89 109.093±8.93 49.921±17.01 54.098±18.19 11.341±7.87 155.514±10.70 15.578±5.31 37.925±13.15 121.771±97.86 4.599±0.41
ENSMUST00000107403 10.355±0.41 19.105±5.84 N/A 15.155±7.88 29.686±4.76 78.920±18.18 19.268±1.94 18.361±0.00 5.362±1.48 89.307±15.08 N/A 34.012±7.45 296.127±23.39 13.062±3.61
ENSMUST00000123903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155746 N/A 74.726±5.42 N/A N/A N/A N/A N/A N/A N/A N/A N/A 62.642±3.12 N/A N/A
ENSMUSG00000006930 ENSMUST00000103124 N/A 3.815±0.00 N/A 38.505±24.47 N/A 0.628±0.00 0.232±0.00 0.426±0.00 0.133±0.08 N/A N/A 2.079±0.98 0.535±0.33 6.146±0.00
ENSMUST00000138603 0.550±0.34 5.220±3.78 0.196±0.00 35.888±2.17 1.462±0.32 1.328±0.42 0.392±0.12 0.628±0.41 0.254±0.13 1.167±0.31 0.056±0.02 1.387±0.68 0.313±0.10 4.440±2.27
ENSMUST00000146878 N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A N/A 0.082±0.04 N/A 1.309±0.00 N/A
ENSMUST00000173630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A
ENSMUST00000174635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.901±0.00 N/A
ENSMUSG00000091478 ENSMUST00000081241 13.891±2.26 11.750±5.18 6.737±1.37 10.733±1.06 11.794±6.45 16.764±10.17 58.518±2.88 20.259±2.57 17.863±11.26 9.205±0.14 5.485±1.83 23.326±12.11 6.937±1.85 8.075±1.11
ENSMUSG00000092509 ENSMUST00000173304 0.138±0.11 0.114±0.04 0.072±0.00 0.476±0.21 0.116±0.10 N/A N/A 0.041±0.00 0.032±0.03 0.095±0.03 N/A 0.128±0.05 0.051±0.02 0.103±0.05

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