C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000V1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000033757-ENSDARG00000045555 CGP 7955 4:17510172-17523664
GeneTranscriptPositionBiotype
ENSDARG00000033757 (ncaph2)
non-SMC condensin II complex, subunit H2 		ENSDART00000040827 (ncaph2-001) 17510172-17520419 protein_coding
ENSDARG00000045555 (sco2)
SCO cytochrome oxidase deficient homolog 2 (yeast) 		ENSDART00000066988 (sco2-201) 17521939-17522805 protein_coding
ENSDART00000150221 (sco2-001) 17521886-17523664 protein_coding
CIL_0000V1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000025770-ENSG00000130489 CGP 9606 22:50508216-50526439
GeneTranscriptPositionBiotype
ENSG00000025708 (TYMP)
thymidine phosphorylase 		ENST00000252029 (TYMP-001) 50525752-50530056 protein_coding
ENST00000395678 (TYMP-005) 50525756-50530032 protein_coding
ENST00000395680 (TYMP-006) 50525752-50529999 protein_coding
ENST00000395681 (TYMP-003) 50525752-50530015 protein_coding
ENST00000425169 (TYMP-008) 50525785-50529990 protein_coding
ENST00000476284 (TYMP-002) 50525757-50530018 retained_intron
ENST00000487162 (TYMP-004) 50527792-50530012 retained_intron
ENST00000487577 (TYMP-007) 50525755-50529996 retained_intron
ENST00000613148 (TYMP-201) 50525755-50530085 protein_coding
ENSG00000025770 (NCAPH2)
non-SMC condensin II complex, subunit H2 		ENST00000299821 (NCAPH2-009) 50508260-50523472 protein_coding
ENST00000395698 (NCAPH2-003) 50508243-50519752 protein_coding
ENST00000395701 (NCAPH2-006) 50508244-50523472 protein_coding
ENST00000418794 (NCAPH2-004) 50508259-50518058 nonsense_mediated_decay
ENST00000420993 (NCAPH2-001) 50508216-50523472 protein_coding
ENST00000518394 (NCAPH2-013) 50508245-50518276 nonsense_mediated_decay
ENST00000520297 (NCAPH2-014) 50519547-50522418 processed_transcript
ENST00000522048 (NCAPH2-015) 50520410-50522569 retained_intron
ENST00000522304 (NCAPH2-016) 50522525-50523471 protein_coding
ENST00000523045 (NCAPH2-012) 50508246-50521589 protein_coding
ENSG00000272821 (CTA-384D8.36)
 ENST00000608319 (CTA-384D8.36-001) 50523926-50524780 antisense
CIL_0000V1_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000008690-ENSMUSG00000091780 CGP 10090 15:89355719-89373818
GeneTranscriptPositionBiotype
ENSMUSG00000022615 (Tymp)
thymidine phosphorylase 		ENSMUST00000023285 (Tymp-201) 89371931-89377039 protein_coding
ENSMUSG00000091780 (Sco2)
SCO cytochrome oxidase deficient homolog 2 (yeast) 		ENSMUST00000167643 (Sco2-201) 89371639-89373818 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000V1_0001ENSDARG00000033757ENSDART00000040827ENSDARG00000045555ENSDART00000066988ENSDART00000150221CIL_0000V1_0002ENSG00000025708ENST00000252029ENST00000395678ENST00000395680ENST00000395681ENST00000425169ENST00000476284ENST00000487162ENST00000487577ENST00000613148ENSG00000025770ENST00000299821ENST00000395698ENST00000395701ENST00000418794ENST00000420993ENST00000518394ENST00000520297ENST00000522048ENST00000522304ENST00000523045ENSG00000272821ENST00000608319CIL_0000V1_0003ENSMUSG00000022615ENSMUST00000023285ENSMUSG00000091780ENSMUST00000167643
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000V1_0001ENSDARG00000033757ENSDART00000040827ENSDARG00000045555ENSDART00000066988ENSDART00000150221CIL_0000V1_0002ENSG00000025708ENST00000252029ENST00000395678ENST00000395681ENST00000425169ENST00000476284ENST00000487162ENST00000487577ENSG00000025770ENST00000299821ENST00000395698ENST00000395701ENST00000420993ENST00000518394ENST00000520297ENST00000522304ENST00000523045ENSG00000272821ENST00000608319CIL_0000V1_0003ENSMUSG00000022615ENSMUST00000023285ENSMUSG00000091780ENSMUST00000167643
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033757 ENSDART00000040827 N/A N/A N/A 1.408±0.49 N/A N/A 1.483±0.37 14.122±5.32 0.694±0.00 N/A 2.450±0.00 N/A N/A N/A
ENSDARG00000045555 ENSDART00000066988 N/A N/A N/A N/A N/A N/A 0.707±0.00 N/A 0.275±0.00 N/A N/A N/A N/A N/A
ENSDART00000150221 N/A N/A N/A 3.189±3.09 N/A N/A 4.854±0.70 6.526±0.00 0.296±0.00 N/A 2.380±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000025708 ENST00000252029 49.968±0.00 32.684±0.00 N/A 3.846±0.00 35.824±0.00 6.301±3.00 14.094±0.00 53.181±0.00 77.862±0.00 3.081±0.00 N/A 8.649±0.00 53.225±1.43 N/A
ENST00000395678 N/A N/A N/A N/A N/A 6.835±0.00 N/A N/A N/A 58.183±0.00 2.542±0.00 N/A 29.916±10.57 N/A
ENST00000395680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395681 N/A 32.014±0.00 N/A N/A 3.406±0.00 6.191±0.00 N/A 5.626±0.00 N/A N/A N/A 30.309±21.70 23.792±0.00 N/A
ENST00000425169 N/A N/A N/A N/A N/A N/A N/A 33.928±0.00 N/A 77.902±0.00 3.727±0.00 N/A N/A N/A
ENST00000476284 N/A N/A N/A N/A 5.173±0.00 N/A 0.709±0.00 N/A N/A 3.002±0.00 0.570±0.00 6.818±0.00 N/A N/A
ENST00000487162 N/A N/A 1.067±0.00 N/A 1.762±0.00 0.868±0.00 0.283±0.00 0.862±0.00 2.006±0.00 21.661±0.00 0.321±0.00 N/A N/A N/A
ENST00000487577 53.097±0.00 49.620±0.00 N/A 7.029±0.00 20.457±17.77 4.799±0.00 N/A N/A N/A 60.411±0.00 N/A 11.441±8.91 N/A N/A
ENST00000613148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000025770 ENST00000299821 3.626±0.00 6.882±0.00 N/A N/A N/A N/A 0.417±0.00 6.537±5.53 1.227±0.00 3.809±0.00 N/A 5.892±0.00 5.004±0.00 19.565±0.00
ENST00000395698 N/A N/A 0.607±0.00 N/A N/A N/A N/A N/A N/A 2.906±0.00 N/A N/A N/A N/A
ENST00000395701 N/A N/A N/A N/A 3.454±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420993 7.358±0.00 11.798±0.00 N/A 5.703±4.66 10.197±0.00 5.542±4.59 6.252±0.00 0.432±0.00 2.923±0.00 N/A 10.933±0.00 20.935±6.41 19.963±3.81 25.158±1.35
ENST00000518394 N/A N/A N/A N/A N/A N/A N/A 1.236±0.00 N/A N/A N/A N/A N/A N/A
ENST00000520297 N/A N/A 0.948±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 17.833±0.00 15.496±0.00 40.396±0.00
ENST00000522048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522304 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.888±0.00 N/A 17.652±0.00 N/A N/A
ENST00000523045 N/A N/A N/A 8.779±0.00 N/A N/A 4.023±0.00 N/A N/A 5.518±0.00 3.067±2.51 N/A N/A N/A
ENSG00000272821 ENST00000608319 N/A N/A 0.894±0.00 6.208±3.30 30.640±0.00 5.656±0.00 14.409±0.00 26.594±0.00 N/A N/A 4.515±0.00 28.309±18.29 16.145±0.00 18.622±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022615 ENSMUST00000023285 N/A N/A N/A N/A N/A 8.663±0.78 N/A N/A 65.032±13.48 11.019±0.00 N/A 18.660±3.16 N/A N/A
ENSMUSG00000091780 ENSMUST00000167643 27.488±4.30 26.473±7.67 23.521±3.16 27.096±4.64 21.363±6.61 26.180±2.84 25.533±4.26 34.387±2.91 77.412±52.06 34.447±2.25 8.932±0.91 45.162±16.76 25.448±3.39 33.869±4.52

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