C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000VS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107099-ENSG00000107104 CGP 9606 9:214854-746106
GeneTranscriptPositionBiotype
ENSG00000107099 (DOCK8)
dedicator of cytokinesis 8 		ENST00000382329 (DOCK8-005) 366251-465255 protein_coding
ENST00000382331 (DOCK8-009) 366229-405099 protein_coding
ENST00000382341 (DOCK8-002) 273050-340620 retained_intron
ENST00000432829 (DOCK8-001) 214865-465259 protein_coding
ENST00000453981 (DOCK8-201) 273048-465259 protein_coding
ENST00000454469 (DOCK8-010) 214868-340620 retained_intron
ENST00000462618 (DOCK8-016) 463555-465247 processed_transcript
ENST00000469197 (DOCK8-008) 214854-286636 nonsense_mediated_decay
ENST00000469391 (DOCK8-012) 273070-464526 protein_coding
ENST00000474772 (DOCK8-007) 311958-314466 processed_transcript
ENST00000478380 (DOCK8-011) 273066-312941 retained_intron
ENST00000479404 (DOCK8-013) 215171-289579 protein_coding
ENST00000483757 (DOCK8-004) 273059-381387 nonsense_mediated_decay
ENST00000487230 (DOCK8-014) 273050-304703 protein_coding
ENST00000493666 (DOCK8-015) 420116-426953 processed_transcript
ENST00000495184 (DOCK8-006) 273084-465241 retained_intron
ENST00000524396 (DOCK8-018) 214865-340620 nonsense_mediated_decay
ENSG00000107104 (KANK1)
KN motif and ankyrin repeat domains 1 		ENST00000354485 (KANK1-002) 504703-734129 retained_intron
ENST00000382286 (KANK1-004) 734748-746104 protein_coding
ENST00000382289 (KANK1-003) 732442-746102 protein_coding
ENST00000382293 (KANK1-005) 706889-746103 protein_coding
ENST00000382297 (KANK1-007) 504716-746105 protein_coding
ENST00000382303 (KANK1-001) 470291-746105 protein_coding
ENST00000467541 (KANK1-008) 470592-484491 processed_transcript
ENST00000475690 (KANK1-000) 471467-476769 processed_transcript
ENST00000489369 (KANK1-006) 504702-746103 processed_transcript
ENST00000619269 (KANK1-201) 504695-746106 protein_coding
ENSG00000183784 (C9orf66)
chromosome 9 open reading frame 66 		ENST00000382387 (C9orf66-001) 212824-215741 protein_coding
ENSG00000202172 (RNU6-1327P)
RNA, U6 small nuclear 1327, pseudogene 		ENST00000365302 (RNU6-1327P-201) 558826-558930 snRNA
ENSG00000227155 (RP11-165F24.3)
 ENST00000415004 (RP11-165F24.3-001) 454304-492112 antisense
ENST00000585631 (RP11-165F24.3-013) 456201-460507 antisense
ENST00000585819 (RP11-165F24.3-003) 456521-470934 antisense
ENST00000585944 (RP11-165F24.3-014) 454432-456988 antisense
ENST00000586805 (RP11-165F24.3-002) 454585-470961 antisense
ENST00000588474 (RP11-165F24.3-011) 456530-466866 antisense
ENST00000588989 (RP11-165F24.3-010) 457004-467219 antisense
ENST00000589287 (RP11-165F24.3-006) 454447-469802 antisense
ENST00000589387 (RP11-165F24.3-007) 454576-469802 antisense
ENST00000590240 (RP11-165F24.3-012) 456211-460227 antisense
ENST00000590518 (RP11-165F24.3-009) 456545-467336 antisense
ENST00000591577 (RP11-165F24.3-005) 454457-469836 antisense
ENST00000592805 (RP11-165F24.3-008) 456518-467390 antisense
ENST00000593137 (RP11-165F24.3-004) 456204-470816 antisense
ENST00000608617 (RP11-165F24.3-015) 459716-466065 antisense
ENSG00000227914 (RP11-130C19.3)
 ENST00000421645 (RP11-130C19.3-001) 673478-685555 antisense
ENST00000608097 (RP11-130C19.3-002) 674124-677628 antisense
ENSG00000228115 (RP11-165F24.5)
 ENST00000442442 (RP11-165F24.5-001) 487774-495610 sense_intronic
ENSG00000229875 (EIF1P1)
eukaryotic translation initiation factor 1 pseudogene 1 		ENST00000421436 (EIF1P1-001) 659986-660326 processed_pseudogene
ENSG00000235330 (RP11-165F24.2)
 ENST00000455592 (RP11-165F24.2-001) 477856-478349 transcribed_processed_pseudogene
ENST00000598100 (RP11-165F24.2-002) 477750-478423 processed_transcript
ENSG00000235880 (RP11-59O6.3)
 ENST00000429661 (RP11-59O6.3-001) 267966-273002 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0000VS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052085-ENSMUSG00000032702 CGP 10090 19:24999529-25434496
GeneTranscriptPositionBiotype
ENSMUSG00000032702 (Kank1)
KN motif and ankyrin repeat domains 1 		ENSMUST00000049400 (Kank1-001) 25236975-25434496 protein_coding
ENSMUST00000137260 (Kank1-003) 25395303-25409772 processed_transcript
ENSMUST00000146647 (Kank1-002) 25406699-25425984 protein_coding
ENSMUST00000155788 (Kank1-004) 25422239-25424508 retained_intron
ENSMUSG00000052085 (Dock8)
dedicator of cytokinesis 8 		ENSMUST00000025831 (Dock8-201) 24999529-25202432 protein_coding
ENSMUSG00000065634 (Gm24252)
predicted gene, 24252 		ENSMUST00000083700 (Gm24252-201) 25166085-25166216 snoRNA

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VS_0001ENSG00000107099ENST00000382329ENST00000382331ENST00000382341ENST00000432829ENST00000453981ENST00000454469ENST00000462618ENST00000469197ENST00000469391ENST00000474772ENST00000478380ENST00000479404ENST00000483757ENST00000487230ENST00000493666ENST00000495184ENST00000524396ENSG00000107104ENST00000354485ENST00000382286ENST00000382289ENST00000382293ENST00000382297ENST00000382303ENST00000467541ENST00000475690ENST00000489369ENST00000619269ENSG00000183784ENST00000382387ENSG00000202172ENST00000365302ENSG00000227155ENST00000415004ENST00000585631ENST00000585819ENST00000585944ENST00000586805ENST00000588474ENST00000588989ENST00000589287ENST00000589387ENST00000590240ENST00000590518ENST00000591577ENST00000592805ENST00000593137ENST00000608617ENSG00000227914ENST00000421645ENST00000608097ENSG00000228115ENST00000442442ENSG00000229875ENST00000421436ENSG00000235330ENST00000455592ENST00000598100ENSG00000235880ENST00000429661CIL_0000VS_0002ENSMUSG00000032702ENSMUST00000049400ENSMUST00000137260ENSMUST00000146647ENSMUST00000155788ENSMUSG00000052085ENSMUST00000025831ENSMUSG00000065634ENSMUST00000083700
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VS_0001ENSG00000107099ENST00000382329ENST00000382331ENST00000382341ENST00000432829ENST00000453981ENST00000454469ENST00000462618ENST00000469197ENST00000469391ENST00000474772ENST00000495184ENSG00000107104ENST00000354485ENST00000382286ENST00000382289ENST00000382293ENST00000382297ENST00000382303ENST00000489369ENST00000619269ENSG00000183784ENST00000382387ENSG00000202172ENST00000365302ENSG00000227155ENST00000415004ENST00000585631ENST00000585819ENST00000585944ENST00000586805ENST00000589287ENST00000590240ENST00000590518ENST00000591577ENST00000592805ENST00000593137ENSG00000227914ENST00000421645ENST00000608097ENSG00000228115ENST00000442442ENSG00000229875ENST00000421436ENSG00000235330ENST00000455592ENST00000598100ENSG00000235880ENST00000429661CIL_0000VS_0002ENSMUSG00000032702ENSMUST00000049400ENSMUST00000137260ENSMUST00000146647ENSMUSG00000052085ENSMUST00000025831ENSMUSG00000065634ENSMUST00000083700
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107099 ENST00000382329 N/A N/A N/A 0.290±0.00 N/A 1.037±0.00 N/A 2.158±0.00 N/A N/A N/A 1.020±0.42 1.090±0.18 3.151±0.00
ENST00000382331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.500±0.00 N/A N/A N/A
ENST00000382341 N/A N/A N/A N/A N/A 1.809±0.00 N/A N/A N/A 4.165±0.00 N/A N/A N/A N/A
ENST00000432829 2.028±0.00 2.219±0.00 1.609±0.00 0.506±0.10 1.760±0.00 N/A 0.512±0.00 1.445±0.67 0.526±0.29 1.079±0.00 0.170±0.00 0.809±0.30 4.030±0.35 0.710±0.00
ENST00000453981 N/A 3.167±0.00 N/A N/A N/A N/A N/A N/A N/A 0.667±0.00 N/A 0.533±0.00 0.812±0.00 N/A
ENST00000454469 N/A N/A N/A N/A N/A N/A N/A 2.099±0.00 1.603±0.00 N/A N/A N/A N/A N/A
ENST00000462618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.545±0.00 N/A N/A
ENST00000469197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.383±0.00 N/A N/A N/A
ENST00000469391 N/A N/A N/A N/A 0.968±0.00 0.606±0.00 0.127±0.00 N/A 0.374±0.00 N/A N/A N/A 3.524±0.00 1.458±0.61
ENST00000474772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.180±0.00
ENST00000478380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495184 N/A N/A 0.535±0.00 N/A 1.388±0.00 0.658±0.45 N/A N/A 0.186±0.00 1.549±0.00 0.153±0.00 0.381±0.00 N/A 1.175±0.00
ENST00000524396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000107104 ENST00000354485 N/A N/A 1.695±0.00 0.836±0.00 0.758±0.00 N/A 1.252±0.00 1.332±0.00 4.252±0.00 1.679±0.00 0.607±0.00 1.036±0.00 N/A N/A
ENST00000382286 N/A N/A N/A N/A N/A N/A N/A 7.130±0.00 5.439±0.00 N/A N/A 4.733±0.00 5.365±0.00 N/A
ENST00000382289 N/A 3.335±0.00 N/A N/A N/A 6.192±0.00 N/A N/A 8.240±0.00 2.589±0.00 N/A 5.585±0.00 N/A 11.019±0.00
ENST00000382293 3.182±0.00 1.252±0.00 1.478±0.00 1.506±0.00 10.613±0.00 2.934±0.00 N/A 3.338±0.00 N/A N/A N/A 2.127±0.53 2.184±0.36 N/A
ENST00000382297 8.043±0.00 3.205±0.00 3.148±0.00 3.048±1.61 14.595±11.76 5.280±0.00 18.790±12.92 7.022±1.13 5.617±1.74 2.784±1.32 5.028±3.02 4.939±2.91 15.349±12.38 7.124±1.24
ENST00000382303 N/A N/A 1.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.00 N/A N/A
ENST00000467541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489369 N/A 0.809±0.00 N/A 0.977±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619269 N/A N/A N/A 0.469±0.00 N/A N/A N/A N/A N/A N/A 2.013±0.00 3.518±0.00 N/A N/A
ENSG00000183784 ENST00000382387 N/A N/A 2.363±0.00 N/A N/A N/A N/A 2.363±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000202172 ENST00000365302 N/A N/A N/A 0.810±0.00 N/A N/A N/A N/A N/A N/A N/A 1.060±0.00 N/A 0.496±0.00
ENSG00000227155 ENST00000415004 N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.11
ENST00000585631 N/A 0.781±0.00 N/A N/A N/A N/A N/A 0.484±0.00 0.090±0.00 0.943±0.00 N/A 0.099±0.03 N/A 0.077±0.00
ENST00000585819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.06
ENST00000585944 N/A N/A N/A 0.043±0.03 N/A 0.483±0.00 0.012±0.00 0.086±0.00 N/A 0.145±0.00 N/A 0.047±0.02 0.047±0.01 N/A
ENST00000586805 N/A N/A N/A 0.052±0.00 N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A
ENST00000588474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A
ENST00000589387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590240 0.137±0.00 N/A N/A 0.051±0.00 N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A 0.211±0.00
ENST00000590518 N/A N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.275±0.00
ENST00000592805 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000593137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 0.058±0.00 N/A
ENST00000608617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227914 ENST00000421645 0.046±0.00 0.070±0.00 N/A 0.045±0.03 N/A 0.182±0.00 0.065±0.00 N/A 0.109±0.00 0.271±0.00 N/A 0.203±0.18 N/A N/A
ENST00000608097 N/A N/A 1.861±0.00 N/A N/A N/A N/A N/A N/A 1.378±0.00 N/A N/A N/A N/A
ENSG00000228115 ENST00000442442 N/A 0.097±0.00 0.705±0.00 N/A N/A N/A 0.029±0.00 0.096±0.00 N/A 0.831±0.00 N/A 0.212±0.11 N/A 0.622±0.14
ENSG00000229875 ENST00000421436 N/A N/A N/A N/A 0.036±0.00 N/A 0.033±0.00 N/A N/A 1.389±0.00 N/A 0.123±0.00 N/A N/A
ENSG00000235330 ENST00000455592 0.090±0.00 N/A N/A N/A 0.232±0.13 N/A 0.057±0.00 0.295±0.00 N/A 1.123±0.00 N/A 0.221±0.15 0.178±0.14 1.148±0.00
ENST00000598100 0.063±0.00 0.066±0.00 0.852±0.00 N/A N/A 0.245±0.08 N/A N/A N/A N/A 0.183±0.00 0.355±0.28 0.225±0.00 0.161±0.04
ENSG00000235880 ENST00000429661 N/A 0.297±0.00 N/A 0.130±0.00 0.438±0.00 N/A N/A N/A 1.164±0.00 0.660±0.00 N/A N/A N/A 0.499±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032702 ENSMUST00000049400 4.317±2.63 1.964±0.55 31.059±1.32 1.218±0.69 3.186±1.51 8.070±0.79 6.015±2.47 11.967±2.19 4.334±1.94 6.685±2.86 0.471±0.05 8.467±2.69 8.652±2.71 1.751±0.82
ENSMUST00000137260 N/A 5.154±0.00 N/A N/A 7.157±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146647 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.968±0.00 N/A 3.140±0.00 2.471±0.00 N/A
ENSMUST00000155788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000052085 ENSMUST00000025831 3.484±1.14 5.628±1.07 14.093±3.85 0.279±0.31 8.650±3.70 4.431±0.53 0.782±0.30 7.678±1.68 2.673±1.74 13.101±0.36 0.378±0.18 8.357±1.49 5.880±4.57 1.323±0.28
ENSMUSG00000065634 ENSMUST00000083700 N/A N/A 8.963±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 12.917±0.00 N/A N/A

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